{"id":"https://openalex.org/W4283212578","doi":"https://doi.org/10.1109/infocomwkshps54753.2022.9797931","title":"PRESSGenDB: PRivacy-prEserving Substring Search on Encrypted Genomic DataBase","display_name":"PRESSGenDB: PRivacy-prEserving Substring Search on Encrypted Genomic DataBase","publication_year":2022,"publication_date":"2022-05-02","ids":{"openalex":"https://openalex.org/W4283212578","doi":"https://doi.org/10.1109/infocomwkshps54753.2022.9797931"},"language":"en","primary_location":{"id":"doi:10.1109/infocomwkshps54753.2022.9797931","is_oa":false,"landing_page_url":"https://doi.org/10.1109/infocomwkshps54753.2022.9797931","pdf_url":null,"source":{"id":"https://openalex.org/S4363607985","display_name":"IEEE INFOCOM 2022 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE INFOCOM 2022 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":null,"any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017873420","display_name":"Sara Jafarbeiki","orcid":"https://orcid.org/0000-0002-8403-3496"},"institutions":[{"id":"https://openalex.org/I1292875679","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07","country_code":"AU","type":"government","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Sara Jafarbeiki","raw_affiliation_strings":["Monash University,Faculty of Information Technology,Australia","Faculty of Information Technology, Monash University, Australia","CSIRO Data61, Australia"],"affiliations":[{"raw_affiliation_string":"Monash University,Faculty of Information Technology,Australia","institution_ids":["https://openalex.org/I56590836"]},{"raw_affiliation_string":"Faculty of Information Technology, Monash University, Australia","institution_ids":["https://openalex.org/I56590836"]},{"raw_affiliation_string":"CSIRO Data61, Australia","institution_ids":["https://openalex.org/I42894916","https://openalex.org/I1292875679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057144969","display_name":"Amin Sakzad","orcid":"https://orcid.org/0000-0003-4569-3384"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Amin Sakzad","raw_affiliation_strings":["Monash University,Faculty of Information Technology,Australia","Faculty of Information Technology, Monash University, Australia"],"affiliations":[{"raw_affiliation_string":"Monash University,Faculty of Information Technology,Australia","institution_ids":["https://openalex.org/I56590836"]},{"raw_affiliation_string":"Faculty of Information Technology, Monash University, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045861660","display_name":"Shabnam Kasra Kermanshahi","orcid":"https://orcid.org/0000-0002-7928-0636"},"institutions":[{"id":"https://openalex.org/I82951845","display_name":"RMIT University","ror":"https://ror.org/04ttjf776","country_code":"AU","type":"education","lineage":["https://openalex.org/I82951845"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Shabnam Kasra Kermanshahi","raw_affiliation_strings":["RMIT University,School of Computing Technologies,Australia","School of Computing Technologies, RMIT University, Australia"],"affiliations":[{"raw_affiliation_string":"RMIT University,School of Computing Technologies,Australia","institution_ids":["https://openalex.org/I82951845"]},{"raw_affiliation_string":"School of Computing Technologies, RMIT University, Australia","institution_ids":["https://openalex.org/I82951845"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013548422","display_name":"Ron Steinfeld","orcid":"https://orcid.org/0000-0003-1745-4183"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Ron Steinfeld","raw_affiliation_strings":["Monash University,Faculty of Information Technology,Australia","Faculty of Information Technology, Monash University, Australia"],"affiliations":[{"raw_affiliation_string":"Monash University,Faculty of Information Technology,Australia","institution_ids":["https://openalex.org/I56590836"]},{"raw_affiliation_string":"Faculty of Information Technology, Monash University, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110752696","display_name":"Raj Gaire","orcid":null},"institutions":[{"id":"https://openalex.org/I1292875679","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07","country_code":"AU","type":"government","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Raj Gaire","raw_affiliation_strings":["CSIRO Data61,Australia","CSIRO Data61, Australia"],"affiliations":[{"raw_affiliation_string":"CSIRO Data61,Australia","institution_ids":["https://openalex.org/I42894916","https://openalex.org/I1292875679"]},{"raw_affiliation_string":"CSIRO Data61, Australia","institution_ids":["https://openalex.org/I42894916","https://openalex.org/I1292875679"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5017873420"],"corresponding_institution_ids":["https://openalex.org/I1292875679","https://openalex.org/I42894916","https://openalex.org/I56590836"],"apc_list":null,"apc_paid":null,"fwci":0.1044,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.25865267,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10764","display_name":"Privacy-Preserving Technologies in Data","score":0.9850000143051147,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9796000123023987,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/substring","display_name":"Substring","score":0.9745830297470093},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7199665307998657},{"id":"https://openalex.org/keywords/encryption","display_name":"Encryption","score":0.6717942357063293},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.5633816719055176},{"id":"https://openalex.org/keywords/outsourcing","display_name":"Outsourcing","score":0.4722960293292999},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.39731094241142273},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.34796953201293945},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.34043896198272705},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11867630481719971},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.11165949702262878}],"concepts":[{"id":"https://openalex.org/C182407805","wikidata":"https://www.wikidata.org/wiki/Q2626534","display_name":"Substring","level":3,"score":0.9745830297470093},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7199665307998657},{"id":"https://openalex.org/C148730421","wikidata":"https://www.wikidata.org/wiki/Q141090","display_name":"Encryption","level":2,"score":0.6717942357063293},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.5633816719055176},{"id":"https://openalex.org/C46934059","wikidata":"https://www.wikidata.org/wiki/Q61515","display_name":"Outsourcing","level":2,"score":0.4722960293292999},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.39731094241142273},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.34796953201293945},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.34043896198272705},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11867630481719971},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.11165949702262878},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/infocomwkshps54753.2022.9797931","is_oa":false,"landing_page_url":"https://doi.org/10.1109/infocomwkshps54753.2022.9797931","pdf_url":null,"source":{"id":"https://openalex.org/S4363607985","display_name":"IEEE INFOCOM 2022 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE INFOCOM 2022 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS)","raw_type":"proceedings-article"},{"id":"pmh:oai:figshare.com:article/27593358","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/27593358","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1502708590","https://openalex.org/W1980132682","https://openalex.org/W2036579652","https://openalex.org/W2147477044","https://openalex.org/W2230451675","https://openalex.org/W2294724888","https://openalex.org/W2584293206","https://openalex.org/W2761844358","https://openalex.org/W2939914288","https://openalex.org/W2987992784","https://openalex.org/W2999984725","https://openalex.org/W3004294861","https://openalex.org/W3123552000","https://openalex.org/W3135744547","https://openalex.org/W3140171369","https://openalex.org/W3215970520","https://openalex.org/W4213338091","https://openalex.org/W6792453970"],"related_works":["https://openalex.org/W2051304374","https://openalex.org/W4286787697","https://openalex.org/W1505605100","https://openalex.org/W3043769852","https://openalex.org/W3210979406","https://openalex.org/W4308670360","https://openalex.org/W2950721324","https://openalex.org/W4200187525","https://openalex.org/W4230921427","https://openalex.org/W1970688438"],"abstract_inverted_index":{"Efficient":[0],"sequencing":[1],"methods":[2],"produce":[3],"a":[4,22,84,108,140,156,168],"large":[5],"amount":[6],"of":[7,61,125,149,159,171],"genetic":[8],"data,":[9],"and":[10,52,72,91,106,134,138],"make":[11],"it":[12,146,192],"accessible":[13],"to":[14,19,30,48,111,117],"researchers.":[15],"This":[16],"leads":[17],"genomics":[18],"be":[20],"considered":[21],"legitimate":[23],"big":[24],"data":[25,29,45,50,55,67],"field.":[26],"Hence,":[27],"outsourcing":[28,47,53],"the":[31,36,59,95,118,187,194],"cloud":[32],"is":[33,39,68,77],"necessary":[34],"as":[35,131,151],"genomic":[37,66,97,128,172],"dataset":[38,170],"large.":[40],"Data":[41],"owners":[42,56],"encrypt":[43],"sensitive":[44],"before":[46],"maintain":[49],"confidentiality":[51],"aids":[54],"in":[57],"resolving":[58],"issue":[60],"local":[62],"storage":[63],"management.":[64],"Because":[65],"so":[69],"enormous,":[70],"safely":[71],"effectively":[73],"performing":[74,89],"researchers\u2019":[75],"queries":[76,126],"challenging.":[78],"In":[79,115],"this":[80],"paper,":[81],"we":[82,189],"propose":[83],"method,":[85],"PRESSGenDB,":[86],"for":[87,164],"securely":[88],"string":[90,132],"substring":[92,135],"searches":[93,136],"on":[94],"encrypted":[96],"sequences":[98,129,152,173],"dataset.":[99],"We":[100],"leverage":[101],"searchable":[102],"symmetric":[103],"encryption":[104],"(SSE)":[105],"design":[107],"new":[109],"method":[110],"handle":[112],"these":[113],"queries.":[114],"comparison":[116],"state-of-the-art":[119],"methods,":[120],"PRESSGenDB":[121],"supports":[122,147],"various":[123],"types":[124],"over":[127,167],"such":[130],"search":[133,163,183],"with":[137,186],"without":[139],"given":[141],"requested":[142],"start":[143],"position.":[144],"Moreover,":[145],"strings":[148],"alphabets":[150],"rather":[153,174],"than":[154,175],"just":[155,176],"binary":[157],"sequence":[158],"0,1s.":[160],"It":[161],"can":[162],"substrings":[165],"(patterns)":[166],"whole":[169],"one":[177],"sequence.":[178],"Furthermore,":[179],"by":[180],"comparing":[181],"PRESSGenDB\u2019s":[182],"complexity":[184],"analytically":[185],"state-of-the-art,":[188],"show":[190],"that":[191],"outperforms":[193],"recent":[195],"efficient":[196],"works.":[197]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
