{"id":"https://openalex.org/W3199453359","doi":"https://doi.org/10.1109/ijcnn52387.2021.9533523","title":"A novel chromosome instance segmentation method based on geometry and deep learning","display_name":"A novel chromosome instance segmentation method based on geometry and deep learning","publication_year":2021,"publication_date":"2021-07-18","ids":{"openalex":"https://openalex.org/W3199453359","doi":"https://doi.org/10.1109/ijcnn52387.2021.9533523","mag":"3199453359"},"language":"en","primary_location":{"id":"doi:10.1109/ijcnn52387.2021.9533523","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn52387.2021.9533523","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 International Joint Conference on Neural Networks (IJCNN)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035637159","display_name":"Kaixin Huang","orcid":"https://orcid.org/0000-0002-1319-0283"},"institutions":[{"id":"https://openalex.org/I187400657","display_name":"South China Normal University","ror":"https://ror.org/01kq0pv72","country_code":"CN","type":"education","lineage":["https://openalex.org/I187400657"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Kaixin Huang","raw_affiliation_strings":["Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","School of Computer Science, South China Normal University, Guangzhou, China"],"affiliations":[{"raw_affiliation_string":"Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","institution_ids":[]},{"raw_affiliation_string":"School of Computer Science, South China Normal University, Guangzhou, China","institution_ids":["https://openalex.org/I187400657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040190558","display_name":"Chengchuang Lin","orcid":"https://orcid.org/0000-0002-3514-2071"},"institutions":[{"id":"https://openalex.org/I187400657","display_name":"South China Normal University","ror":"https://ror.org/01kq0pv72","country_code":"CN","type":"education","lineage":["https://openalex.org/I187400657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chengchuang Lin","raw_affiliation_strings":["Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","School of Computer Science, South China Normal University, Guangzhou, China"],"affiliations":[{"raw_affiliation_string":"Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","institution_ids":[]},{"raw_affiliation_string":"School of Computer Science, South China Normal University, Guangzhou, China","institution_ids":["https://openalex.org/I187400657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110813944","display_name":"Runhua Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I187400657","display_name":"South China Normal University","ror":"https://ror.org/01kq0pv72","country_code":"CN","type":"education","lineage":["https://openalex.org/I187400657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Runhua Huang","raw_affiliation_strings":["Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","School of Computer Science, South China Normal University, Guangzhou, China"],"affiliations":[{"raw_affiliation_string":"Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","institution_ids":[]},{"raw_affiliation_string":"School of Computer Science, South China Normal University, Guangzhou, China","institution_ids":["https://openalex.org/I187400657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101818721","display_name":"Gansen Zhao","orcid":"https://orcid.org/0009-0007-1526-5326"},"institutions":[{"id":"https://openalex.org/I187400657","display_name":"South China Normal University","ror":"https://ror.org/01kq0pv72","country_code":"CN","type":"education","lineage":["https://openalex.org/I187400657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Gansen Zhao","raw_affiliation_strings":["Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","School of Computer Science, South China Normal University, Guangzhou, China"],"affiliations":[{"raw_affiliation_string":"Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","institution_ids":[]},{"raw_affiliation_string":"School of Computer Science, South China Normal University, Guangzhou, China","institution_ids":["https://openalex.org/I187400657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073156180","display_name":"Aihua Yin","orcid":"https://orcid.org/0000-0002-0324-5260"},"institutions":[{"id":"https://openalex.org/I4210143875","display_name":"Guangdong Province Women and Children Hospital","ror":"https://ror.org/0493m8x04","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210143875"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Aihua Yin","raw_affiliation_strings":["Maternal and Children Metabolic-Genetic Key Laboratory, Guangdong Women and Children Hospital, Medical Genetic Centre, Guangzhou, China"],"affiliations":[{"raw_affiliation_string":"Maternal and Children Metabolic-Genetic Key Laboratory, Guangdong Women and Children Hospital, Medical Genetic Centre, Guangzhou, China","institution_ids":["https://openalex.org/I4210143875"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070688060","display_name":"Hanbiao Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I4210143875","display_name":"Guangdong Province Women and Children Hospital","ror":"https://ror.org/0493m8x04","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210143875"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hanbiao Chen","raw_affiliation_strings":["Maternal and Children Metabolic-Genetic Key Laboratory, Guangdong Women and Children Hospital, Medical Genetic Centre, Guangzhou, China"],"affiliations":[{"raw_affiliation_string":"Maternal and Children Metabolic-Genetic Key Laboratory, Guangdong Women and Children Hospital, Medical Genetic Centre, Guangzhou, China","institution_ids":["https://openalex.org/I4210143875"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013643897","display_name":"Li Guo","orcid":"https://orcid.org/0000-0003-3821-4058"},"institutions":[{"id":"https://openalex.org/I4210143875","display_name":"Guangdong Province Women and Children Hospital","ror":"https://ror.org/0493m8x04","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210143875"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Li Guo","raw_affiliation_strings":["Maternal and Children Metabolic-Genetic Key Laboratory, Guangdong Women and Children Hospital, Medical Genetic Centre, Guangzhou, China"],"affiliations":[{"raw_affiliation_string":"Maternal and Children Metabolic-Genetic Key Laboratory, Guangdong Women and Children Hospital, Medical Genetic Centre, Guangzhou, China","institution_ids":["https://openalex.org/I4210143875"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063140687","display_name":"Chun Shan","orcid":"https://orcid.org/0000-0003-4925-6085"},"institutions":[{"id":"https://openalex.org/I4210122543","display_name":"Guangdong Polytechnic Normal University","ror":"https://ror.org/02pcb5m77","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210122543"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chun Shan","raw_affiliation_strings":["School of Electronics and Information, Guangdong Polytechnic Normal University, Guangzhou, China"],"affiliations":[{"raw_affiliation_string":"School of Electronics and Information, Guangdong Polytechnic Normal University, Guangzhou, China","institution_ids":["https://openalex.org/I4210122543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101134986","display_name":"Ruihua Nie","orcid":null},"institutions":[{"id":"https://openalex.org/I187400657","display_name":"South China Normal University","ror":"https://ror.org/01kq0pv72","country_code":"CN","type":"education","lineage":["https://openalex.org/I187400657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ruihua Nie","raw_affiliation_strings":["Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","School of Computer Science, South China Normal University, Guangzhou, China"],"affiliations":[{"raw_affiliation_string":"Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","institution_ids":[]},{"raw_affiliation_string":"School of Computer Science, South China Normal University, Guangzhou, China","institution_ids":["https://openalex.org/I187400657"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079920323","display_name":"Shuangyin Li","orcid":"https://orcid.org/0000-0001-6404-3438"},"institutions":[{"id":"https://openalex.org/I187400657","display_name":"South China Normal University","ror":"https://ror.org/01kq0pv72","country_code":"CN","type":"education","lineage":["https://openalex.org/I187400657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuangyin Li","raw_affiliation_strings":["Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","School of Computer Science, South China Normal University, Guangzhou, China"],"affiliations":[{"raw_affiliation_string":"Key Lab on Cloud Security and Assessment technology of Guangzhou, Guangzhou, China","institution_ids":[]},{"raw_affiliation_string":"School of Computer Science, South China Normal University, Guangzhou, China","institution_ids":["https://openalex.org/I187400657"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5035637159"],"corresponding_institution_ids":["https://openalex.org/I187400657"],"apc_list":null,"apc_paid":null,"fwci":1.5431,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.83947485,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10978","display_name":"Prenatal Screening and Diagnostics","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/2735","display_name":"Pediatrics, Perinatology and Child Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9836000204086304,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.7347027063369751},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.705626368522644},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6419109106063843},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.562882661819458},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5201126337051392},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5091869235038757},{"id":"https://openalex.org/keywords/karyotype","display_name":"Karyotype","score":0.436576783657074},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.42760446667671204},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.383709192276001},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.298101544380188},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2543562650680542},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1618497371673584}],"concepts":[{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.7347027063369751},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.705626368522644},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6419109106063843},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.562882661819458},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5201126337051392},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5091869235038757},{"id":"https://openalex.org/C53226629","wikidata":"https://www.wikidata.org/wiki/Q189967","display_name":"Karyotype","level":4,"score":0.436576783657074},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.42760446667671204},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.383709192276001},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.298101544380188},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2543562650680542},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1618497371673584}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/ijcnn52387.2021.9533523","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn52387.2021.9533523","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 International Joint Conference on Neural Networks (IJCNN)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.6000000238418579,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G6302445485","display_name":null,"funder_award_id":"2018YFB1404402","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W2015159529","https://openalex.org/W2101234009","https://openalex.org/W2160244321","https://openalex.org/W2532173015","https://openalex.org/W2768518967","https://openalex.org/W2892380715","https://openalex.org/W2896988071","https://openalex.org/W2907859451","https://openalex.org/W2914726756","https://openalex.org/W2962682625","https://openalex.org/W2963150697","https://openalex.org/W2963857746","https://openalex.org/W2980846635","https://openalex.org/W2988066048","https://openalex.org/W3034522582","https://openalex.org/W3036937376","https://openalex.org/W3106494053","https://openalex.org/W3113909365","https://openalex.org/W3127529150","https://openalex.org/W3128720244","https://openalex.org/W4253754523","https://openalex.org/W4295312788","https://openalex.org/W4299802372","https://openalex.org/W6675354045","https://openalex.org/W6747312767","https://openalex.org/W6758944117","https://openalex.org/W6766978945","https://openalex.org/W6787534414","https://openalex.org/W6790337826"],"related_works":["https://openalex.org/W4315434538","https://openalex.org/W2108498225","https://openalex.org/W2390806584","https://openalex.org/W2034184982","https://openalex.org/W2357064814","https://openalex.org/W4312270766","https://openalex.org/W2060929468","https://openalex.org/W2586947668","https://openalex.org/W2022999990","https://openalex.org/W2390766987"],"abstract_inverted_index":{"In":[0],"medicine,":[1],"any":[2],"abnormalities":[3],"in":[4,164,183],"the":[5,10,16,35,73,89,156,235,239],"number":[6,230],"of":[7,12,76,91,135,174,188,204,211,231,238],"chromosomes":[8,13],"or":[9],"structure":[11],"may":[14,80],"cause":[15],"newborn":[17,48],"baby":[18,49],"to":[19,44,54,67,72,84,132,147,192,198,244],"suffer":[20],"from":[21,58,151],"genetic":[22],"diseases,":[23],"such":[24],"as":[25],"Edward":[26],"syndrome":[27],"and":[28,38,62,82,96,138,195],"so":[29],"on.":[30],"Chromosome":[31],"karyotype":[32],"analysis":[33],"is":[34,130,145,179,191,214,242],"most":[36],"important":[37],"common":[39],"method":[40,106,129,144,158,241],"for":[41,201],"prenatal":[42],"diagnosis":[43],"determine":[45],"whether":[46],"a":[47,101,114,126,141,165,180,219,228],"has":[50],"chromosome":[51,56,64,78,93,103,134,149,176,205],"defects":[52],"refers":[53],"segment":[55,113],"instances":[57,65,79,94,137,150],"stained":[59,116],"cell":[60,117,171],"images":[61,172],"arrange":[63],"according":[66],"their":[68],"categories.":[69],"However,":[70],"due":[71],"non-rigid":[74],"nature":[75],"chromosomes,":[77],"overlap":[81],"adhere":[83],"each":[85],"other,":[86],"which":[87,178],"makes":[88],"task":[90],"segmenting":[92],"time-consuming":[95],"error-prone.":[97],"This":[98],"paper":[99],"proposes":[100],"novel":[102],"instance":[104,161,206],"segmentation":[105,162,207,236],"that":[107,155,215],"includes":[108],"three":[109],"stages.":[110],"First,":[111],"we":[112],"given":[115],"image":[118],"into":[119],"several":[120],"segments":[121],"using":[122],"geometric":[123],"connectivity.":[124],"Second,":[125],"machine":[127],"learning":[128,197],"proposed":[131,157,240],"distinguish":[133],"individual":[136],"clusters.":[139,152],"Finally,":[140],"deep":[142,196,250],"learning-based":[143],"applied":[146],"separate":[148],"It":[153],"shows":[154],"achieves":[159],"97.61%":[160],"accuracy":[163],"hold-out":[166],"clinical":[167,184],"dataset":[168],"with":[169,227],"162":[170],"consisting":[173],"7,452":[175],"instances,":[177],"promising":[181],"result":[182],"application.":[185],"The":[186,209],"innovation":[187,213],"this":[189,212],"work":[190],"combine":[193],"geometry":[194],"handle":[199],"tasks":[200],"different":[202],"stages":[203],"issue.":[208],"benefit":[210],"it":[216],"can":[217],"obtain":[218],"much":[220],"better":[221],"performance":[222,237],"than":[223],"existing":[224,245],"geometric-based":[225],"methods":[226,246],"small":[229],"training":[232],"samples.":[233],"Meanwhile,":[234],"superior":[243],"fully":[247],"based":[248],"on":[249],"learning.":[251]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
