{"id":"https://openalex.org/W3201560543","doi":"https://doi.org/10.1109/ijcnn52387.2021.9533478","title":"Prediction of Protein-Protein Interactions using Deep Multi-Modal Representations","display_name":"Prediction of Protein-Protein Interactions using Deep Multi-Modal Representations","publication_year":2021,"publication_date":"2021-07-18","ids":{"openalex":"https://openalex.org/W3201560543","doi":"https://doi.org/10.1109/ijcnn52387.2021.9533478","mag":"3201560543"},"language":"en","primary_location":{"id":"doi:10.1109/ijcnn52387.2021.9533478","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn52387.2021.9533478","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 International Joint Conference on Neural Networks (IJCNN)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053086856","display_name":"Kanchan Jha","orcid":"https://orcid.org/0000-0003-3837-3083"},"institutions":[{"id":"https://openalex.org/I132153292","display_name":"Indian Institute of Technology Patna","ror":"https://ror.org/01ft5vz71","country_code":"IN","type":"education","lineage":["https://openalex.org/I132153292"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Kanchan Jha","raw_affiliation_strings":["Indian Institute of Technology Patna,Department of Computer Science and Engineering,Patna,Bihar,India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indian Institute of Technology Patna,Department of Computer Science and Engineering,Patna,Bihar,India","institution_ids":["https://openalex.org/I132153292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060797340","display_name":"Sriparna Saha","orcid":"https://orcid.org/0000-0001-5458-9381"},"institutions":[{"id":"https://openalex.org/I1284577377","display_name":"Center for Strategic and International Studies","ror":"https://ror.org/04my2jj52","country_code":"US","type":"other","lineage":["https://openalex.org/I1284577377"]},{"id":"https://openalex.org/I132153292","display_name":"Indian Institute of Technology Patna","ror":"https://ror.org/01ft5vz71","country_code":"IN","type":"education","lineage":["https://openalex.org/I132153292"]}],"countries":["IN","US"],"is_corresponding":false,"raw_author_name":"Sriparna Saha","raw_affiliation_strings":["CSIS &#x0026; APPCAIR","Indian Institute of Technology Patna,Department of Computer Science and Engineering,Patna,Bihar,India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CSIS &#x0026; APPCAIR","institution_ids":["https://openalex.org/I1284577377"]},{"raw_affiliation_string":"Indian Institute of Technology Patna,Department of Computer Science and Engineering,Patna,Bihar,India","institution_ids":["https://openalex.org/I132153292"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066292961","display_name":"Snehanshu Saha","orcid":"https://orcid.org/0000-0002-8458-604X"},"institutions":[{"id":"https://openalex.org/I1284577377","display_name":"Center for Strategic and International Studies","ror":"https://ror.org/04my2jj52","country_code":"US","type":"other","lineage":["https://openalex.org/I1284577377"]},{"id":"https://openalex.org/I132153292","display_name":"Indian Institute of Technology Patna","ror":"https://ror.org/01ft5vz71","country_code":"IN","type":"education","lineage":["https://openalex.org/I132153292"]}],"countries":["IN","US"],"is_corresponding":false,"raw_author_name":"Snehanshu Saha","raw_affiliation_strings":["CSIS &#x0026; APPCAIR","Indian Institute of Technology Patna,Department of Computer Science and Engineering,Patna,Bihar,India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CSIS &#x0026; APPCAIR","institution_ids":["https://openalex.org/I1284577377"]},{"raw_affiliation_string":"Indian Institute of Technology Patna,Department of Computer Science and Engineering,Patna,Bihar,India","institution_ids":["https://openalex.org/I132153292"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.8167,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.89449611,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7395919561386108},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6290347576141357},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6152273416519165},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5352429151535034},{"id":"https://openalex.org/keywords/modal","display_name":"Modal","score":0.5335928201675415},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.528346598148346},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.522119402885437},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4789057970046997},{"id":"https://openalex.org/keywords/feature-learning","display_name":"Feature learning","score":0.47784826159477234},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4686194062232971},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3599367141723633},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33059340715408325},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.09846746921539307},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07679721713066101}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7395919561386108},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6290347576141357},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6152273416519165},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5352429151535034},{"id":"https://openalex.org/C71139939","wikidata":"https://www.wikidata.org/wiki/Q910194","display_name":"Modal","level":2,"score":0.5335928201675415},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.528346598148346},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.522119402885437},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4789057970046997},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.47784826159477234},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4686194062232971},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3599367141723633},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33059340715408325},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.09846746921539307},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07679721713066101},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C188027245","wikidata":"https://www.wikidata.org/wiki/Q750446","display_name":"Polymer chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/ijcnn52387.2021.9533478","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn52387.2021.9533478","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 International Joint Conference on Neural Networks (IJCNN)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334771","display_name":"Science and Engineering Research Board","ror":"https://ror.org/03ffdsr55"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W1549159750","https://openalex.org/W1884509322","https://openalex.org/W2023170582","https://openalex.org/W2037036397","https://openalex.org/W2042301222","https://openalex.org/W2043484763","https://openalex.org/W2044523575","https://openalex.org/W2059980912","https://openalex.org/W2073718013","https://openalex.org/W2076710572","https://openalex.org/W2091710329","https://openalex.org/W2097651291","https://openalex.org/W2099862356","https://openalex.org/W2103017472","https://openalex.org/W2113654464","https://openalex.org/W2128796532","https://openalex.org/W2145753039","https://openalex.org/W2146312020","https://openalex.org/W2152705149","https://openalex.org/W2167869241","https://openalex.org/W2194775991","https://openalex.org/W2337686908","https://openalex.org/W2340589369","https://openalex.org/W2504204199","https://openalex.org/W2616246685","https://openalex.org/W2618265628","https://openalex.org/W2744103888","https://openalex.org/W2804331675","https://openalex.org/W2911614559","https://openalex.org/W2919115771","https://openalex.org/W2954199749","https://openalex.org/W2962969117","https://openalex.org/W2963078194","https://openalex.org/W2963686995","https://openalex.org/W2963703618","https://openalex.org/W2966916628","https://openalex.org/W2978855205","https://openalex.org/W3034456004","https://openalex.org/W3083968401","https://openalex.org/W3089575540","https://openalex.org/W3095543875","https://openalex.org/W4231824804","https://openalex.org/W4233751197","https://openalex.org/W6661634902","https://openalex.org/W6724310229","https://openalex.org/W6743446608","https://openalex.org/W6755541679"],"related_works":["https://openalex.org/W4375867731","https://openalex.org/W2611989081","https://openalex.org/W4230611425","https://openalex.org/W2905271011","https://openalex.org/W3164948662","https://openalex.org/W3048601286","https://openalex.org/W4289536128","https://openalex.org/W2965925734","https://openalex.org/W3153597579","https://openalex.org/W4298151006"],"abstract_inverted_index":{"Protein-protein":[0],"interaction":[1,78],"(PPI)":[2],"plays":[3],"essential":[4],"roles":[5],"in":[6,18,48,116],"nearly":[7],"all":[8],"biological":[9,57],"processes":[10],"of":[11,15,26,29,35,40,73,96,100,136,158],"living":[12],"organisms.":[13],"Identification":[14],"PPI":[16,36,101],"helps":[17],"understanding":[19],"the":[20,30,33,45,53,77,93,141,156,159],"cellular":[21],"pathways":[22],"and":[23,55,86,109,127,138,143],"complex":[24],"structure":[25,85],"proteins.":[27,97],"Most":[28],"works":[31],"on":[32,123,140],"prediction":[34],"utilized":[37],"one":[38],"type":[39],"information,":[41],"mainly":[42],"sequence-based.":[43],"With":[44],"recent":[46],"development":[47],"deep":[49,113],"learning":[50,114],"technologies,":[51],"capturing":[52],"diverse":[54],"sparse":[56],"dataset's":[58],"relevant":[59],"features":[60],"is":[61,102],"possible.":[62],"This":[63],"paper":[64],"proposes":[65],"a":[66,70],"framework":[67],"that":[68],"incorporates":[69],"multi-modal":[71],"representation":[72],"proteins":[74],"to":[75,91,164],"predict":[76],"between":[79],"them.":[80],"Current":[81],"work":[82],"utilizes":[83],"3D":[84],"Gene":[87],"ontology":[88],"(GO)":[89],"information":[90],"generate":[92],"vector":[94],"representations":[95],"The":[98,130,149],"task":[99],"divided":[103],"into":[104],"two":[105,124],"phases:":[106],"feature":[107],"generation":[108],"prediction.":[110],"We":[111,119],"use":[112],"algorithms":[115],"both":[117],"stages.":[118],"validate":[120],"our":[121],"approach":[122],"datasets:":[125],"Human":[126],"S.":[128,144],"cerevisiae.":[129],"trained":[131],"model":[132],"achieves":[133],"accuracy":[134],"values":[135],"97.94%":[137],"95.33%":[139],"human":[142],"cerevisiae":[145],"test":[146],"sets,":[147],"respectively.":[148],"results":[150],"obtained":[151],"over":[152],"these":[153],"datasets":[154],"illustrate":[155],"superiority":[157],"proposed":[160],"method":[161],"as":[162],"compared":[163],"state-of-the-art":[165],"methods.":[166]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
