{"id":"https://openalex.org/W3090330235","doi":"https://doi.org/10.1109/ijcnn48605.2020.9206682","title":"HIME: Mining and Ensembling Heterogeneous Information for Protein-Protein Interactions Prediction","display_name":"HIME: Mining and Ensembling Heterogeneous Information for Protein-Protein Interactions Prediction","publication_year":2020,"publication_date":"2020-07-01","ids":{"openalex":"https://openalex.org/W3090330235","doi":"https://doi.org/10.1109/ijcnn48605.2020.9206682","mag":"3090330235"},"language":"en","primary_location":{"id":"doi:10.1109/ijcnn48605.2020.9206682","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn48605.2020.9206682","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 International Joint Conference on Neural Networks (IJCNN)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101987301","display_name":"Huaming Chen","orcid":"https://orcid.org/0000-0001-5678-472X"},"institutions":[{"id":"https://openalex.org/I204824540","display_name":"University of Wollongong","ror":"https://ror.org/00jtmb277","country_code":"AU","type":"education","lineage":["https://openalex.org/I204824540"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Huaming Chen","raw_affiliation_strings":["School of Computing and Information Technology, University of Wollongong, Wollongong, NSW, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing and Information Technology, University of Wollongong, Wollongong, NSW, Australia","institution_ids":["https://openalex.org/I204824540"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032314861","display_name":"Yaochu Jin","orcid":"https://orcid.org/0000-0003-1100-0631"},"institutions":[{"id":"https://openalex.org/I28290843","display_name":"University of Surrey","ror":"https://ror.org/00ks66431","country_code":"GB","type":"education","lineage":["https://openalex.org/I28290843"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Yaochu Jin","raw_affiliation_strings":["Department of Computer Science, University of Surrey, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Surrey, United Kingdom","institution_ids":["https://openalex.org/I28290843"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100436059","display_name":"Lei Wang","orcid":"https://orcid.org/0000-0003-0184-307X"},"institutions":[{"id":"https://openalex.org/I204824540","display_name":"University of Wollongong","ror":"https://ror.org/00jtmb277","country_code":"AU","type":"education","lineage":["https://openalex.org/I204824540"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Lei Wang","raw_affiliation_strings":["School of Computing and Information Technology, University of Wollongong, Wollongong, NSW, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing and Information Technology, University of Wollongong, Wollongong, NSW, Australia","institution_ids":["https://openalex.org/I204824540"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058644115","display_name":"Chi\u2010Hung Chi","orcid":"https://orcid.org/0000-0001-7271-1926"},"institutions":[{"id":"https://openalex.org/I1292875679","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07","country_code":"AU","type":"government","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Chi-Hung Chi","raw_affiliation_strings":["Data61, CSIRO, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Data61, CSIRO, Australia","institution_ids":["https://openalex.org/I42894916","https://openalex.org/I1292875679"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031318875","display_name":"Jun Shen","orcid":"https://orcid.org/0000-0002-9403-7140"},"institutions":[{"id":"https://openalex.org/I204824540","display_name":"University of Wollongong","ror":"https://ror.org/00jtmb277","country_code":"AU","type":"education","lineage":["https://openalex.org/I204824540"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Jun Shen","raw_affiliation_strings":["School of Computing and Information Technology, University of Wollongong, Wollongong, NSW, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing and Information Technology, University of Wollongong, Wollongong, NSW, Australia","institution_ids":["https://openalex.org/I204824540"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.09410919,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"36","issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8031527996063232},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5671876072883606},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5470401644706726},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.49341097474098206},{"id":"https://openalex.org/keywords/ensemble-forecasting","display_name":"Ensemble forecasting","score":0.4297513961791992},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3724178373813629},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33789148926734924},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.06072840094566345}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8031527996063232},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5671876072883606},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5470401644706726},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.49341097474098206},{"id":"https://openalex.org/C119898033","wikidata":"https://www.wikidata.org/wiki/Q3433888","display_name":"Ensemble forecasting","level":2,"score":0.4297513961791992},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3724178373813629},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33789148926734924},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.06072840094566345},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/ijcnn48605.2020.9206682","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn48605.2020.9206682","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 International Joint Conference on Neural Networks (IJCNN)","raw_type":"proceedings-article"},{"id":"pmh:oai:pub.uni-bielefeld.de:2978415","is_oa":false,"landing_page_url":"https://pub.uni-bielefeld.de/record/2978415","pdf_url":null,"source":{"id":"https://openalex.org/S4306401670","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"http://purl.org/coar/resource_type/c_5794"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W1967572918","https://openalex.org/W1981005463","https://openalex.org/W1982267716","https://openalex.org/W1986708244","https://openalex.org/W1989277387","https://openalex.org/W1998977002","https://openalex.org/W2009884897","https://openalex.org/W2021210077","https://openalex.org/W2021389623","https://openalex.org/W2036956828","https://openalex.org/W2052685738","https://openalex.org/W2055562489","https://openalex.org/W2058190388","https://openalex.org/W2059325738","https://openalex.org/W2062685052","https://openalex.org/W2079277579","https://openalex.org/W2092123736","https://openalex.org/W2095867585","https://openalex.org/W2099862356","https://openalex.org/W2108134720","https://openalex.org/W2118128448","https://openalex.org/W2118601386","https://openalex.org/W2124249167","https://openalex.org/W2132582966","https://openalex.org/W2139237500","https://openalex.org/W2142734829","https://openalex.org/W2145957695","https://openalex.org/W2147580225","https://openalex.org/W2149310258","https://openalex.org/W2152705149","https://openalex.org/W2153569313","https://openalex.org/W2165253681","https://openalex.org/W2465613542","https://openalex.org/W2522528995","https://openalex.org/W2558837609","https://openalex.org/W2757598598","https://openalex.org/W2768348081","https://openalex.org/W2784098468","https://openalex.org/W2793767769","https://openalex.org/W2915536738","https://openalex.org/W2979087928","https://openalex.org/W2984956438","https://openalex.org/W2989711391","https://openalex.org/W4233698560","https://openalex.org/W4248391971","https://openalex.org/W6655422985","https://openalex.org/W6745609711"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4224009465","https://openalex.org/W4306674287","https://openalex.org/W4286629047","https://openalex.org/W4389443772","https://openalex.org/W4205958290","https://openalex.org/W4384212932","https://openalex.org/W2548721895","https://openalex.org/W2373456246","https://openalex.org/W1975570126"],"abstract_inverted_index":{"Research":[0],"on":[1,71,115],"protein-protein":[2],"interactions":[3],"(PPIs)":[4],"data":[5,34],"paves":[6],"the":[7,11,18,83,88,110],"way":[8],"towards":[9],"understanding":[10],"mechanisms":[12],"of":[13,21,23,32,46,55,58,103,109],"infectious":[14],"diseases,":[15],"however":[16],"improving":[17],"prediction":[19,45,69,105],"performance":[20,102,108,128],"PPIs":[22,68,104],"inter-species":[24],"remains":[25],"a":[26,52,64],"challenge.":[27],"Since":[28],"one":[29],"single":[30],"type":[31],"sequence":[33],"such":[35],"as":[36],"amino":[37],"acid":[38],"composition":[39],"may":[40],"be":[41],"deficient":[42],"for":[43,67],"high-quality":[44],"protein":[47,117],"interactions,":[48],"we":[49],"have":[50],"investigated":[51],"broader":[53],"range":[54],"heterogeneous":[56],"information":[57],"sequences":[59],"data.":[60,85],"This":[61],"paper":[62],"proposes":[63],"novel":[65],"framework":[66,112],"based":[70],"Heterogeneous":[72],"Information":[73],"Mining":[74],"and":[75],"Ensembling":[76],"(HIME)":[77],"process":[78,94],"to":[79],"effectively":[80],"learn":[81],"from":[82],"interaction":[84,118],"In":[86],"particular,":[87],"proposed":[89,111],"approach":[90],"introduces":[91],"an":[92],"ensemble":[93],"together":[95],"with":[96],"substantial":[97],"features":[98],"that":[99,124],"generate":[100],"better":[101],"task.":[106],"The":[107,120],"is":[113],"validated":[114],"real":[116],"datasets.":[119],"extensive":[121],"experiments":[122],"show":[123],"HIME":[125],"achieves":[126],"higher":[127],"over":[129],"all":[130],"existing":[131],"methods":[132],"reported":[133],"in":[134],"literature":[135],"so":[136],"far.":[137]},"counts_by_year":[],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
