{"id":"https://openalex.org/W2736033163","doi":"https://doi.org/10.1109/ijcnn.2017.7965860","title":"Accurate classification of immunomodulatory RNA sequences","display_name":"Accurate classification of immunomodulatory RNA sequences","publication_year":2017,"publication_date":"2017-05-01","ids":{"openalex":"https://openalex.org/W2736033163","doi":"https://doi.org/10.1109/ijcnn.2017.7965860","mag":"2736033163"},"language":"en","primary_location":{"id":"doi:10.1109/ijcnn.2017.7965860","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn.2017.7965860","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 International Joint Conference on Neural Networks (IJCNN)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040516353","display_name":"Hugo Guillen-Ramirez","orcid":"https://orcid.org/0000-0003-0705-7432"},"institutions":[{"id":"https://openalex.org/I64663401","display_name":"Center for Scientific Research and Higher Education at Ensenada","ror":"https://ror.org/04znhwb73","country_code":"MX","type":"facility","lineage":["https://openalex.org/I64663401"]}],"countries":["MX"],"is_corresponding":true,"raw_author_name":"Hugo A. Guillen-Ramirez","raw_affiliation_strings":["Computer Sciences Department, Center for Scientific Research and Higher Education of Ensenada (CICESE), Ensenada, Baja California, Mexico"],"affiliations":[{"raw_affiliation_string":"Computer Sciences Department, Center for Scientific Research and Higher Education of Ensenada (CICESE), Ensenada, Baja California, Mexico","institution_ids":["https://openalex.org/I64663401"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016655479","display_name":"Jos\u00e9 Colbes","orcid":"https://orcid.org/0000-0002-7231-7563"},"institutions":[{"id":"https://openalex.org/I64663401","display_name":"Center for Scientific Research and Higher Education at Ensenada","ror":"https://ror.org/04znhwb73","country_code":"MX","type":"facility","lineage":["https://openalex.org/I64663401"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Jose Colbes","raw_affiliation_strings":["Computer Sciences Department, Center for Scientific Research and Higher Education of Ensenada (CICESE), Ensenada, Baja California, Mexico"],"affiliations":[{"raw_affiliation_string":"Computer Sciences Department, Center for Scientific Research and Higher Education of Ensenada (CICESE), Ensenada, Baja California, Mexico","institution_ids":["https://openalex.org/I64663401"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075390665","display_name":"Carlos A. Brizuela","orcid":"https://orcid.org/0000-0003-4621-0380"},"institutions":[{"id":"https://openalex.org/I64663401","display_name":"Center for Scientific Research and Higher Education at Ensenada","ror":"https://ror.org/04znhwb73","country_code":"MX","type":"facility","lineage":["https://openalex.org/I64663401"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Carlos A. Brizuela","raw_affiliation_strings":["Computer Sciences Department, Center for Scientific Research and Higher Education of Ensenada (CICESE), Ensenada, Baja California, Mexico"],"affiliations":[{"raw_affiliation_string":"Computer Sciences Department, Center for Scientific Research and Higher Education of Ensenada (CICESE), Ensenada, Baja California, Mexico","institution_ids":["https://openalex.org/I64663401"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042399304","display_name":"Israel Mart\u00ednez-P\u00e9rez","orcid":"https://orcid.org/0000-0003-0451-1353"},"institutions":[{"id":"https://openalex.org/I64663401","display_name":"Center for Scientific Research and Higher Education at Ensenada","ror":"https://ror.org/04znhwb73","country_code":"MX","type":"facility","lineage":["https://openalex.org/I64663401"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Israel M. Martinez-Perez","raw_affiliation_strings":["Computer Sciences Department, Center for Scientific Research and Higher Education of Ensenada (CICESE), Ensenada, Baja California, Mexico"],"affiliations":[{"raw_affiliation_string":"Computer Sciences Department, Center for Scientific Research and Higher Education of Ensenada (CICESE), Ensenada, Baja California, Mexico","institution_ids":["https://openalex.org/I64663401"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5040516353"],"corresponding_institution_ids":["https://openalex.org/I64663401"],"apc_list":null,"apc_paid":null,"fwci":0.1063,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.47768007,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"14","issue":null,"first_page":"236","last_page":"241"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10725","display_name":"RNA Interference and Gene Delivery","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11668","display_name":"interferon and immune responses","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.6335774064064026},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.5949479937553406},{"id":"https://openalex.org/keywords/rna-interference","display_name":"RNA interference","score":0.5919487476348877},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5910680294036865},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5235925912857056},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.4802951514720917},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4185836613178253},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.37508416175842285},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2832939922809601},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19112399220466614},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1906382143497467}],"concepts":[{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.6335774064064026},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.5949479937553406},{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.5919487476348877},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5910680294036865},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5235925912857056},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.4802951514720917},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4185836613178253},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.37508416175842285},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2832939922809601},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19112399220466614},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1906382143497467},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/ijcnn.2017.7965860","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn.2017.7965860","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 International Joint Conference on Neural Networks (IJCNN)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4399999976158142,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W114517082","https://openalex.org/W1512098439","https://openalex.org/W1542426682","https://openalex.org/W1680392829","https://openalex.org/W2015858554","https://openalex.org/W2061888576","https://openalex.org/W2065596509","https://openalex.org/W2086561953","https://openalex.org/W2087347434","https://openalex.org/W2125993116","https://openalex.org/W2133990480","https://openalex.org/W2144926976","https://openalex.org/W2153635508","https://openalex.org/W2158275940","https://openalex.org/W2261539256","https://openalex.org/W2487087946","https://openalex.org/W2911964244","https://openalex.org/W6630527977","https://openalex.org/W6637386731"],"related_works":["https://openalex.org/W2387630553","https://openalex.org/W1572871015","https://openalex.org/W2411232599","https://openalex.org/W3156756868","https://openalex.org/W2030262874","https://openalex.org/W1998876971","https://openalex.org/W2885524011","https://openalex.org/W2078249988","https://openalex.org/W2351305945","https://openalex.org/W2131861600"],"abstract_inverted_index":{"During":[0],"the":[1,31,52,64,107,125,140],"past":[2],"decade,":[3],"non-coding":[4],"RNA":[5,32],"has":[6],"been":[7],"an":[8,55],"exploding":[9],"area":[10],"of":[11,27,45,54,67,90,102,118,145],"interest":[12],"for":[13],"researches":[14],"from":[15,18,36,127],"many":[16],"fields,":[17],"cellular":[19],"biology":[20],"to":[21,62,105,129],"medical":[22],"applications.":[23],"A":[24],"commercial":[25],"application":[26],"these":[28,73,91],"molecules":[29,71],"is":[30],"interference":[33],"process":[34],"(RNAi)":[35],"which":[37],"there":[38],"are":[39,75],"available":[40],"reagents":[41],"and":[42,109,148],"a":[43,86,100,116],"database":[44],"documented":[46],"unwanted":[47],"side":[48],"effects,":[49],"such":[50],"as":[51],"generation":[53],"immunomodulatory":[56,77],"response":[57],"that":[58],"might":[59],"be":[60,95],"used":[61],"enhance":[63],"therapeutic":[65],"effects":[66],"gene":[68],"therapy.":[69],"The":[70,135],"with":[72,122],"properties":[74],"denominated":[76],"ribonucleotides":[78],"(IMORNs).":[79],"We":[80,97],"explore":[81],"here":[82],"whether":[83],"or":[84],"not":[85],"recent":[87],"classification":[88,113],"result":[89],"IMORNs":[92,108],"[6]":[93],"can":[94],"improved.":[96],"focus":[98],"on":[99,115],"set":[101],"sequence-based":[103],"features":[104],"represent":[106],"we":[110],"test":[111],"different":[112],"algorithms":[114],"dataset":[117],"1122":[119],"ssRNA":[120],"sequences":[121],"lengths":[123],"in":[124,133,143],"range":[126],"17":[128],"27":[130],"nucleotides":[131],"proposed":[132],"[6].":[134],"best":[136],"found":[137],"classifier":[138],"outperforms":[139],"existing":[141],"results":[142],"terms":[144],"accuracy,":[146],"specificity,":[147],"Matthews":[149],"correlation":[150],"coefficient.":[151]},"counts_by_year":[{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
