{"id":"https://openalex.org/W2147167831","doi":"https://doi.org/10.1109/ijcnn.2010.5596807","title":"An improved SOM-based visualization technique for DNA microarray data analysis","display_name":"An improved SOM-based visualization technique for DNA microarray data analysis","publication_year":2010,"publication_date":"2010-07-01","ids":{"openalex":"https://openalex.org/W2147167831","doi":"https://doi.org/10.1109/ijcnn.2010.5596807","mag":"2147167831"},"language":"en","primary_location":{"id":"doi:10.1109/ijcnn.2010.5596807","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn.2010.5596807","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The 2010 International Joint Conference on Neural Networks (IJCNN)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049913930","display_name":"Jagdish C. Patra","orcid":"https://orcid.org/0000-0002-6257-0469"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Jagdish C. Patra","raw_affiliation_strings":["School of Computer Engineering, Nanyang Technological University, Singapore","School of Computer Engineering, Nanyang Technological University,,Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University, Singapore","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University,,Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068070739","display_name":"Jacob A. Abraham","orcid":"https://orcid.org/0000-0002-5336-5631"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Jacob Abraham","raw_affiliation_strings":["School of Computer Engineering, Nanyang Technological University, Singapore","School of Computer Engineering, Nanyang Technological University,,Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University, Singapore","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University,,Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025809855","display_name":"Pramod Kumar Meher","orcid":"https://orcid.org/0000-0003-0992-1159"},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Pramod K. Meher","raw_affiliation_strings":["Department of Communication Systems, Institute for Infocomm Research, Singapore","Department of Communication Systems, Institute for Infocomm Research, Singapore#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Communication Systems, Institute for Infocomm Research, Singapore","institution_ids":["https://openalex.org/I3005327000"]},{"raw_affiliation_string":"Department of Communication Systems, Institute for Infocomm Research, Singapore#TAB#","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101615097","display_name":"Goutam Chakraborty","orcid":"https://orcid.org/0000-0001-9661-1129"},"institutions":[{"id":"https://openalex.org/I6090238","display_name":"Iwate Prefectural University","ror":"https://ror.org/054dx8336","country_code":"JP","type":"education","lineage":["https://openalex.org/I6090238"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Goutam Chakraborty","raw_affiliation_strings":["Department of Software and Information Science, Iwate Prefectural University, Japan","[Department of Software & Information Science, Iwate Prefectural University, Japan]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Software and Information Science, Iwate Prefectural University, Japan","institution_ids":["https://openalex.org/I6090238"]},{"raw_affiliation_string":"[Department of Software & Information Science, Iwate Prefectural University, Japan]","institution_ids":["https://openalex.org/I6090238"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"36","issue":null,"first_page":"1","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9825999736785889,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.8381270170211792},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7348940968513489},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5998457074165344},{"id":"https://openalex.org/keywords/self-organizing-map","display_name":"Self-organizing map","score":0.5773331522941589},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5534972548484802},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.47248855233192444},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.42026615142822266},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4087763726711273},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3408581018447876},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10920074582099915},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10157567262649536}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.8381270170211792},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7348940968513489},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5998457074165344},{"id":"https://openalex.org/C111168008","wikidata":"https://www.wikidata.org/wiki/Q1136838","display_name":"Self-organizing map","level":3,"score":0.5773331522941589},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5534972548484802},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.47248855233192444},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.42026615142822266},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4087763726711273},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3408581018447876},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10920074582099915},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10157567262649536},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/ijcnn.2010.5596807","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn.2010.5596807","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The 2010 International Joint Conference on Neural Networks (IJCNN)","raw_type":"proceedings-article"},{"id":"pmh:oai:researchbank.swinburne.edu.au:dd75d3f0-8c1e-4bb6-9f00-50373575b770/1","is_oa":false,"landing_page_url":"http://hdl.handle.net/1959.3/385112","pdf_url":null,"source":{"id":"https://openalex.org/S4306401157","display_name":"Swinburne Research Bank (Swinburne University of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I57093077","host_organization_name":"Swinburne University of Technology","host_organization_lineage":["https://openalex.org/I57093077"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"2010 International Joint Conference on Neural Networks (IJCNN), Barcelona, Spain, 18-23 July 2010, pp. 800-806","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W181546580","https://openalex.org/W238668910","https://openalex.org/W1679913846","https://openalex.org/W1989297334","https://openalex.org/W2004958539","https://openalex.org/W2014545696","https://openalex.org/W2043754674","https://openalex.org/W2063473501","https://openalex.org/W2088709281","https://openalex.org/W2098793454","https://openalex.org/W2101938621","https://openalex.org/W2105853822","https://openalex.org/W2109363337","https://openalex.org/W2110634300","https://openalex.org/W2110802877","https://openalex.org/W2122389322","https://openalex.org/W2123237319","https://openalex.org/W2135187880","https://openalex.org/W2147246240","https://openalex.org/W2149519821","https://openalex.org/W2150926065","https://openalex.org/W2169415399","https://openalex.org/W2171209182","https://openalex.org/W4245176872","https://openalex.org/W6607405641","https://openalex.org/W6675156470","https://openalex.org/W6684753479"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2154046714","https://openalex.org/W2189613078","https://openalex.org/W2579659702","https://openalex.org/W2923661510","https://openalex.org/W1574055964","https://openalex.org/W1965329638","https://openalex.org/W2542318691","https://openalex.org/W3160708108"],"abstract_inverted_index":{"Effective":[0],"and":[1,32,43,76,96],"meaningful":[2],"visualization":[3,62,82],"techniques":[4],"are":[5,24],"quite":[6],"important":[7],"for":[8],"multidimensional":[9,22,50],"DNA":[10],"microarray":[11],"gene":[12,39],"expression":[13],"data":[14,23,51],"analysis.":[15],"Elucidating":[16],"the":[17,30,35,38,49],"cluster":[18,93],"properties":[19],"of":[20,34,37,48],"these":[21],"often":[25],"complex.":[26],"Patterns,":[27],"hypotheses":[28],"on":[29],"relationships,":[31],"ultimately":[33],"function":[36],"can":[40],"be":[41],"analyzed":[42],"visualized":[44],"by":[45],"non-linear":[46],"reduction":[47],"to":[52,90],"a":[53],"lower":[54],"dimension.":[55],"In":[56],"this":[57],"paper,":[58],"an":[59],"improved":[60],"SOM":[61,80],"technique":[63],"named":[64],"Improved":[65],"Side":[66],"Intensity":[67],"Modulated":[68],"(ISIM)":[69],"Self-Organizing":[70],"Map":[71],"(SOM)":[72],"has":[73],"been":[74],"proposed":[75],"compared":[77],"with":[78],"other":[79],"based":[81],"techniques.":[83],"On":[84],"different":[85],"datasets,":[86],"ISIM-SOM":[87],"is":[88],"found":[89],"offer":[91],"better":[92],"boundary,":[94],"simplicity":[95],"clarity.":[97]},"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}