{"id":"https://openalex.org/W1965346645","doi":"https://doi.org/10.1109/iembs.2011.6090631","title":"Unifying the integration, analysis and interpretation of multi-omic datasets: Exploration of the disease networks of Obstructive Nephropathy in children","display_name":"Unifying the integration, analysis and interpretation of multi-omic datasets: Exploration of the disease networks of Obstructive Nephropathy in children","publication_year":2011,"publication_date":"2011-08-01","ids":{"openalex":"https://openalex.org/W1965346645","doi":"https://doi.org/10.1109/iembs.2011.6090631","mag":"1965346645","pmid":"https://pubmed.ncbi.nlm.nih.gov/22255147"},"language":"en","primary_location":{"id":"doi:10.1109/iembs.2011.6090631","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iembs.2011.6090631","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079422639","display_name":"Panagiotis Moulos","orcid":"https://orcid.org/0000-0002-4199-0333"},"institutions":[{"id":"https://openalex.org/I4210127711","display_name":"National Hellenic Research Foundation","ror":"https://ror.org/033m02g29","country_code":"GR","type":"funder","lineage":["https://openalex.org/I4210127711"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"P. Moulos","raw_affiliation_strings":["Institute of Biological Research and Biotechnology, National Hellenic Research Foundation, Athens, Greece. pmoulos@eie.gr","Institute of Biological Research and Biotechnology, National Hellenic Research Foundation, Athens, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biological Research and Biotechnology, National Hellenic Research Foundation, Athens, Greece. pmoulos@eie.gr","institution_ids":["https://openalex.org/I4210127711"]},{"raw_affiliation_string":"Institute of Biological Research and Biotechnology, National Hellenic Research Foundation, Athens, Greece","institution_ids":["https://openalex.org/I4210127711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045630754","display_name":"Ioannis Valavanis","orcid":null},"institutions":[{"id":"https://openalex.org/I4210127711","display_name":"National Hellenic Research Foundation","ror":"https://ror.org/033m02g29","country_code":"GR","type":"funder","lineage":["https://openalex.org/I4210127711"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"I. Valavanis","raw_affiliation_strings":["Institute of Biological Research and Biotechnology, National Hellenic Research Foundation, Athens, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biological Research and Biotechnology, National Hellenic Research Foundation, Athens, Greece","institution_ids":["https://openalex.org/I4210127711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045393131","display_name":"Julie Klein","orcid":"https://orcid.org/0000-0002-3279-0559"},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"J. Klein","raw_affiliation_strings":["Institut de M\u00e9decine Mol\u00e9culaire de Rangueil, Universit\u00e9 Toulouse III Paul-Sabatier, Toulouse, France","U858, Institut National de la Sant\u00e9 Et de la Recherche M\u00e9dicale, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut de M\u00e9decine Mol\u00e9culaire de Rangueil, Universit\u00e9 Toulouse III Paul-Sabatier, Toulouse, France","institution_ids":["https://openalex.org/I134560555"]},{"raw_affiliation_string":"U858, Institut National de la Sant\u00e9 Et de la Recherche M\u00e9dicale, Toulouse, France","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013025849","display_name":"Ilias Maglogiannis","orcid":"https://orcid.org/0000-0003-2860-399X"},"institutions":[{"id":"https://openalex.org/I179161674","display_name":"Technological Educational Institute of Central Greece","ror":"https://ror.org/03ed9w591","country_code":"GR","type":"education","lineage":["https://openalex.org/I179161674"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"I. Maglogiannis","raw_affiliation_strings":["University of Central Greece, Lamia, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Central Greece, Lamia, Greece","institution_ids":["https://openalex.org/I179161674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009141968","display_name":"Joost P. Schanstra","orcid":"https://orcid.org/0000-0002-7471-372X"},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"J. Schanstra","raw_affiliation_strings":["Institut de M\u00e9decine Mol\u00e9culaire de Rangueil, Universit\u00e9 Toulouse III Paul-Sabatier, Toulouse, France","U858, Institut National de la Sant\u00e9 Et de la Recherche M\u00e9dicale, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut de M\u00e9decine Mol\u00e9culaire de Rangueil, Universit\u00e9 Toulouse III Paul-Sabatier, Toulouse, France","institution_ids":["https://openalex.org/I134560555"]},{"raw_affiliation_string":"U858, Institut National de la Sant\u00e9 Et de la Recherche M\u00e9dicale, Toulouse, France","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067189264","display_name":"Aristotelis Chatziioannou","orcid":"https://orcid.org/0000-0003-2078-0844"},"institutions":[{"id":"https://openalex.org/I4210127711","display_name":"National Hellenic Research Foundation","ror":"https://ror.org/033m02g29","country_code":"GR","type":"funder","lineage":["https://openalex.org/I4210127711"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"A. Chatziioannou","raw_affiliation_strings":["Institute of Biological Research and Biotechnology, National Hellenic Research Foundation, Athens, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biological Research and Biotechnology, National Hellenic Research Foundation, Athens, Greece","institution_ids":["https://openalex.org/I4210127711"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.9882,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.85049119,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"2011","issue":null,"first_page":"3716","last_page":"3719"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9704999923706055,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14393","display_name":"Health, Environment, Cognitive Aging","score":0.9513999819755554,"subfield":{"id":"https://openalex.org/subfields/2307","display_name":"Health, Toxicology and Mutagenesis"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7817171812057495},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7691087126731873},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6178333163261414},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.5235214233398438},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.5066183805465698},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.4605196714401245},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.42989444732666016},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3979365825653076},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2689693868160248},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.16061455011367798}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7817171812057495},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7691087126731873},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6178333163261414},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.5235214233398438},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.5066183805465698},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.4605196714401245},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.42989444732666016},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3979365825653076},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2689693868160248},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.16061455011367798},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000704","descriptor_name":"Analysis of Variance","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000704","descriptor_name":"Analysis of Variance","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000704","descriptor_name":"Analysis of Variance","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002648","descriptor_name":"Child","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002648","descriptor_name":"Child","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002648","descriptor_name":"Child","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007674","descriptor_name":"Kidney Diseases","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D007674","descriptor_name":"Kidney Diseases","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D007674","descriptor_name":"Kidney Diseases","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1109/iembs.2011.6090631","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iembs.2011.6090631","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society","raw_type":"proceedings-article"},{"id":"pmid:22255147","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22255147","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null},{"id":"pmh:oai:http://helios-eie.ekt.gr:10442/12385","is_oa":false,"landing_page_url":"http://hdl.handle.net/10442/12385","pdf_url":null,"source":{"id":"https://openalex.org/S4306402248","display_name":"National Hellenic Research Foundation Helios Repository (National Hellenic Research Foundation)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210127711","host_organization_name":"National Hellenic Research Foundation","host_organization_lineage":["https://openalex.org/I4210127711"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:ir.lib.uth.gr:11615/31157","is_oa":false,"landing_page_url":"http://hdl.handle.net/11615/31157","pdf_url":null,"source":{"id":"https://openalex.org/S4306400243","display_name":"University of Thessaly Institutional Repository (University of Thessaly)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I145722265","host_organization_name":"University of Thessaly","host_organization_lineage":["https://openalex.org/I145722265"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.scopus.com/inward/record.url?eid=2-s2.0-84055189760&amp;partnerID=40&amp;md5=f6ff5d2b48aa9c0ffda3839beecef6db","raw_type":"conferenceItem"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.41999998688697815,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W118243704","https://openalex.org/W1538739904","https://openalex.org/W1976529806","https://openalex.org/W2002671057","https://openalex.org/W2002815072","https://openalex.org/W2004053140","https://openalex.org/W2014716295","https://openalex.org/W2027033896","https://openalex.org/W2037548921","https://openalex.org/W2039783492","https://openalex.org/W2058839892","https://openalex.org/W2069525354","https://openalex.org/W2078022480","https://openalex.org/W2105470473","https://openalex.org/W2105556644","https://openalex.org/W2115108153","https://openalex.org/W2125557245","https://openalex.org/W2129010206","https://openalex.org/W2151163584","https://openalex.org/W2173947680","https://openalex.org/W6670155802"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2154046714","https://openalex.org/W2189613078","https://openalex.org/W2579659702","https://openalex.org/W2923661510","https://openalex.org/W1574055964","https://openalex.org/W1965329638","https://openalex.org/W2542318691","https://openalex.org/W3160708108"],"abstract_inverted_index":{"The":[0,70],"wealth":[1],"of":[2,8,15,22,25,93,120],"data":[3,32,62],"amassed":[4],"by":[5],"the":[6,19,23,26,90,94,104,109,121],"utilization":[7],"various":[9,13,86],"high-throughput":[10],"techniques,":[11],"in":[12,30,46,58,112],"layers":[14,66],"molecular":[16,97],"dissection,":[17],"stresses":[18],"critical":[20],"role":[21],"unification":[24],"computational":[27],"methodologies":[28],"applied":[29],"biological":[31,65],"handling,":[33],"storage,":[34],"analysis":[35],"and":[36,75,82],"visualization.":[37],"In":[38],"this":[39],"article,":[40],"a":[41,47,116],"generic":[42],"workflow":[43,71],"is":[44,51],"showcased":[45],"multi-omic":[48],"dataset":[49],"that":[50],"used":[52],"to":[53],"study":[54],"Obstructive":[55],"Nephropathy":[56],"(ON)":[57],"children,":[59],"integrating":[60],"microarray":[61],"from":[63],"several":[64,77],"(transcriptomic,":[67],"post-transcriptomic,":[68],"proteomic).":[69],"exploits":[72],"raw":[73],"measurements":[74],"through":[76],"analytical":[78],"stages":[79],"(preprocessing,":[80],"statistical":[81],"functional),":[83],"which":[84],"entail":[85],"parsing":[87],"steps,":[88],"reaches":[89],"visualization":[91],"stage":[92],"heterogeneous,":[95],"broader,":[96],"interacting":[98],"network":[99],"derived.":[100],"This":[101],"network,":[102],"where":[103],"interconnected":[105],"entities":[106],"are":[107],"exploiting":[108],"knowledge":[110],"stored":[111],"public":[113],"repositories,":[114],"represents":[115],"systems":[117],"level":[118],"interpretation":[119],"pathological":[122],"state":[123],"probed.":[124]},"counts_by_year":[{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
