{"id":"https://openalex.org/W1994527015","doi":"https://doi.org/10.1109/iembs.2011.6090164","title":"GPGPU accelerated cardiac arrhythmia simulations","display_name":"GPGPU accelerated cardiac arrhythmia simulations","publication_year":2011,"publication_date":"2011-08-01","ids":{"openalex":"https://openalex.org/W1994527015","doi":"https://doi.org/10.1109/iembs.2011.6090164","mag":"1994527015","pmid":"https://pubmed.ncbi.nlm.nih.gov/22254412"},"language":"en","primary_location":{"id":"doi:10.1109/iembs.2011.6090164","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iembs.2011.6090164","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3589987","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100391999","display_name":"Wei Wang","orcid":"https://orcid.org/0000-0002-5257-7675"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wei Wang","raw_affiliation_strings":["Department Information Sciences, University of Delaware, Newark, DE 19716, USA. wwang@cis.udel.edu","Department of Computer and Information Sciences, University of Delaware, Newark, DE 19716, USA.#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department Information Sciences, University of Delaware, Newark, DE 19716, USA. wwang@cis.udel.edu","institution_ids":["https://openalex.org/I86501945"]},{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware, Newark, DE 19716, USA.#TAB#","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002254350","display_name":"H. Howie Huang","orcid":"https://orcid.org/0000-0001-8588-7680"},"institutions":[{"id":"https://openalex.org/I193531525","display_name":"George Washington University","ror":"https://ror.org/00y4zzh67","country_code":"US","type":"education","lineage":["https://openalex.org/I193531525"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"H. Howie Huang","raw_affiliation_strings":["Departm Computer Engineering, George Washington University, Washington DC, DC, USA","Department of Electrical and Computer Engineering, The George Washington University, Washington DC 20052 USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departm Computer Engineering, George Washington University, Washington DC, DC, USA","institution_ids":["https://openalex.org/I193531525"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, The George Washington University, Washington DC 20052 USA","institution_ids":["https://openalex.org/I193531525"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066442351","display_name":"Matthew W. Kay","orcid":"https://orcid.org/0000-0003-2756-5055"},"institutions":[{"id":"https://openalex.org/I193531525","display_name":"George Washington University","ror":"https://ror.org/00y4zzh67","country_code":"US","type":"education","lineage":["https://openalex.org/I193531525"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Kay","raw_affiliation_strings":["Departm Computer Engineering, George Washington University, Washington DC, DC, USA","Department of Electrical and Computer Engineering, The George Washington University, Washington DC 20052 USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departm Computer Engineering, George Washington University, Washington DC, DC, USA","institution_ids":["https://openalex.org/I193531525"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, The George Washington University, Washington DC 20052 USA","institution_ids":["https://openalex.org/I193531525"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103791820","display_name":"John Cavazos","orcid":null},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Cavazos","raw_affiliation_strings":["Department of Computer and Information Sciences, University of Delaware, Newark, DE, USA","Department of Computer and Information Sciences, University of Delaware, Newark, DE 19716, USA.#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware, Newark, DE, USA","institution_ids":["https://openalex.org/I86501945"]},{"raw_affiliation_string":"Department of Computer and Information Sciences, University of Delaware, Newark, DE 19716, USA.#TAB#","institution_ids":["https://openalex.org/I86501945"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"2011","issue":null,"first_page":"724","last_page":"727"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11601","display_name":"Neuroscience and Neural Engineering","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11601","display_name":"Neuroscience and Neural Engineering","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10904","display_name":"Embedded Systems Design Techniques","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10054","display_name":"Parallel Computing and Optimization Techniques","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/general-purpose-computing-on-graphics-processing-units","display_name":"General-purpose computing on graphics processing units","score":0.807585597038269},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7728703618049622},{"id":"https://openalex.org/keywords/porting","display_name":"Porting","score":0.6734374761581421},{"id":"https://openalex.org/keywords/implementation","display_name":"Implementation","score":0.5982120037078857},{"id":"https://openalex.org/keywords/cardiac-electrophysiology","display_name":"Cardiac electrophysiology","score":0.5254627466201782},{"id":"https://openalex.org/keywords/cuda","display_name":"CUDA","score":0.4273649752140045},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.4172014594078064},{"id":"https://openalex.org/keywords/embedded-system","display_name":"Embedded system","score":0.323982834815979},{"id":"https://openalex.org/keywords/electrophysiology","display_name":"Electrophysiology","score":0.15294674038887024},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.12367600202560425},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.09004545211791992}],"concepts":[{"id":"https://openalex.org/C50630238","wikidata":"https://www.wikidata.org/wiki/Q971505","display_name":"General-purpose computing on graphics processing units","level":3,"score":0.807585597038269},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7728703618049622},{"id":"https://openalex.org/C106251023","wikidata":"https://www.wikidata.org/wiki/Q851989","display_name":"Porting","level":3,"score":0.6734374761581421},{"id":"https://openalex.org/C26713055","wikidata":"https://www.wikidata.org/wiki/Q245962","display_name":"Implementation","level":2,"score":0.5982120037078857},{"id":"https://openalex.org/C61381695","wikidata":"https://www.wikidata.org/wiki/Q3302130","display_name":"Cardiac electrophysiology","level":3,"score":0.5254627466201782},{"id":"https://openalex.org/C2778119891","wikidata":"https://www.wikidata.org/wiki/Q477690","display_name":"CUDA","level":2,"score":0.4273649752140045},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.4172014594078064},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.323982834815979},{"id":"https://openalex.org/C185263204","wikidata":"https://www.wikidata.org/wiki/Q1154774","display_name":"Electrophysiology","level":2,"score":0.15294674038887024},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.12367600202560425},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.09004545211791992},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000200","descriptor_name":"Action Potentials","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000200","descriptor_name":"Action Potentials","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000200","descriptor_name":"Action Potentials","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001145","descriptor_name":"Arrhythmias, Cardiac","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D001145","descriptor_name":"Arrhythmias, Cardiac","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D001145","descriptor_name":"Arrhythmias, Cardiac","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006329","descriptor_name":"Heart Conduction System","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D006329","descriptor_name":"Heart Conduction System","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D006329","descriptor_name":"Heart Conduction System","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008955","descriptor_name":"Models, Cardiovascular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008955","descriptor_name":"Models, Cardiovascular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008955","descriptor_name":"Models, Cardiovascular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012815","descriptor_name":"Signal Processing, Computer-Assisted","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D012815","descriptor_name":"Signal Processing, Computer-Assisted","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D012815","descriptor_name":"Signal Processing, Computer-Assisted","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D032383","descriptor_name":"Myocytes, Cardiac","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D032383","descriptor_name":"Myocytes, Cardiac","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D032383","descriptor_name":"Myocytes, Cardiac","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1109/iembs.2011.6090164","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iembs.2011.6090164","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society","raw_type":"proceedings-article"},{"id":"pmid:22254412","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22254412","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null},{"id":"pmh:oai:europepmc.org:2590160","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3589987","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3589987","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3589987","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Conf Proc IEEE Eng Med Biol Soc","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:3589987","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3589987","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Conf Proc IEEE Eng Med Biol Soc","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3330258275","display_name":null,"funder_award_id":"R01 HL095828","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"}],"funders":[{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W1919989578","https://openalex.org/W1984336411","https://openalex.org/W1991182597","https://openalex.org/W2041387489","https://openalex.org/W2100140335","https://openalex.org/W2119244261","https://openalex.org/W2143421187","https://openalex.org/W6640490414"],"related_works":["https://openalex.org/W2621501241","https://openalex.org/W2208757713","https://openalex.org/W3177128669","https://openalex.org/W2991848348","https://openalex.org/W1963859303","https://openalex.org/W2364044215","https://openalex.org/W2352639277","https://openalex.org/W2389600408","https://openalex.org/W240129890","https://openalex.org/W3048701459"],"abstract_inverted_index":{"Computational":[0],"modeling":[1],"of":[2,152],"cardiac":[3,15,109],"electrophysiology":[4],"is":[5],"a":[6,71,105,160],"powerful":[7],"tool":[8],"for":[9,19,39,76,139,144],"studying":[10],"arrhythmia":[11,101],"mechanisms.":[12],"In":[13,86],"particular,":[14],"models":[16,47,66,79],"are":[17,48],"useful":[18,69],"gaining":[20],"insights":[21],"into":[22],"experimental":[23],"studies,":[24],"and":[25,56,111,125,142],"in":[26,52,57,70,80,163],"the":[27,40,58,78,135,150,165],"foreseeable":[28],"future":[29],"they":[30],"will":[31],"be":[32,68,84,97,156],"used":[33,98],"by":[34],"clinicians":[35],"to":[36,67,99],"improve":[37],"therapy":[38],"patients":[41],"suffering":[42],"from":[43],"complex":[44],"arrhythmias.":[45],"Such":[46],"highly":[49],"intricate,":[50],"both":[51],"their":[53],"geometric":[54],"structure":[55],"equations":[59],"that":[60,91,149,154],"represent":[61],"myocyte":[62],"electrophysiology.":[63],"For":[64],"these":[65],"clinical":[72],"setting,":[73],"cost-effective":[74],"solutions":[75],"solving":[77],"real":[81],"time":[82],"must":[83],"developed.":[85],"this":[87],"work,":[88],"we":[89],"hypothesized":[90],"low-cost":[92],"GPGPU-based":[93],"hardware":[94],"systems":[95],"can":[96],"accelerate":[100],"simulations.":[102],"We":[103,147],"ported":[104],"two":[106],"dimensional":[107],"monodomain":[108],"model":[110],"executed":[112],"it":[113],"on":[114],"various":[115],"GPGPU":[116,129,166],"platforms.":[117],"Electrical":[118],"activity":[119],"was":[120,159],"simulated":[121],"during":[122],"point":[123,140],"stimulation":[124,141],"rotor":[126,145],"activity.":[127,146],"Our":[128],"implementations":[130],"provided":[131],"significant":[132],"speedups":[133],"over":[134],"CPU":[136],"implementation:":[137],"18X":[138],"12X":[143],"found":[148],"number":[151],"threads":[153],"could":[155],"launched":[157],"concurrently":[158],"critical":[161],"factor":[162],"optimizing":[164],"implementations.":[167]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
