{"id":"https://openalex.org/W3009132179","doi":"https://doi.org/10.1109/icspcs47537.2019.9008745","title":"Correction of the genes expression measurements based on the probes design features","display_name":"Correction of the genes expression measurements based on the probes design features","publication_year":2019,"publication_date":"2019-12-01","ids":{"openalex":"https://openalex.org/W3009132179","doi":"https://doi.org/10.1109/icspcs47537.2019.9008745","mag":"3009132179"},"language":"en","primary_location":{"id":"doi:10.1109/icspcs47537.2019.9008745","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icspcs47537.2019.9008745","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 13th International Conference on Signal Processing and Communication Systems (ICSPCS)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007617587","display_name":"Krzysztof Puszy\u0144ski","orcid":"https://orcid.org/0000-0002-5546-4916"},"institutions":[{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Krzysztof Puszynski","raw_affiliation_strings":["System Engineering Group, Silesian University of Technology, Gliwice, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"System Engineering Group, Silesian University of Technology, Gliwice, Poland","institution_ids":["https://openalex.org/I119004910"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063136074","display_name":"Anna Lalik","orcid":"https://orcid.org/0000-0003-4856-9821"},"institutions":[{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Anna Lalik","raw_affiliation_strings":["System Engineering Group, Silesian University of Technology, Gliwice, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"System Engineering Group, Silesian University of Technology, Gliwice, Poland","institution_ids":["https://openalex.org/I119004910"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049208063","display_name":"Roman Jaksik","orcid":"https://orcid.org/0000-0003-1866-6380"},"institutions":[{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Roman Jaksik","raw_affiliation_strings":["System Engineering Group, Silesian University of Technology, Gliwice, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"System Engineering Group, Silesian University of Technology, Gliwice, Poland","institution_ids":["https://openalex.org/I119004910"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I119004910"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14207131,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"2019","issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6937128901481628},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6278781294822693},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5908930897712708},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5588563084602356},{"id":"https://openalex.org/keywords/oligonucleotide","display_name":"Oligonucleotide","score":0.552661120891571},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.5102565288543701},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.5076922178268433},{"id":"https://openalex.org/keywords/sequence-motif","display_name":"Sequence motif","score":0.45226895809173584},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.42944595217704773},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41083961725234985},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.38979852199554443},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.36999061703681946},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3288421630859375},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.12353581190109253},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.06975021958351135}],"concepts":[{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6937128901481628},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6278781294822693},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5908930897712708},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5588563084602356},{"id":"https://openalex.org/C129312508","wikidata":"https://www.wikidata.org/wiki/Q133686","display_name":"Oligonucleotide","level":3,"score":0.552661120891571},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.5102565288543701},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.5076922178268433},{"id":"https://openalex.org/C117745874","wikidata":"https://www.wikidata.org/wiki/Q901612","display_name":"Sequence motif","level":3,"score":0.45226895809173584},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.42944595217704773},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41083961725234985},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.38979852199554443},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.36999061703681946},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3288421630859375},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.12353581190109253},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.06975021958351135},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/icspcs47537.2019.9008745","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icspcs47537.2019.9008745","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 13th International Conference on Signal Processing and Communication Systems (ICSPCS)","raw_type":"proceedings-article"},{"id":"mag:3086637179","is_oa":false,"landing_page_url":"https://jglobal.jst.go.jp/en/detail?JGLOBAL_ID=202002284333626278","pdf_url":null,"source":{"id":"https://openalex.org/S4306512817","display_name":"IEEE Conference Proceedings","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":"IEEE Conference Proceedings","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W1542823905","https://openalex.org/W1554238696","https://openalex.org/W1847307531","https://openalex.org/W2030626250","https://openalex.org/W2060173830","https://openalex.org/W2064641822","https://openalex.org/W2074955506","https://openalex.org/W2104431394","https://openalex.org/W2510152514","https://openalex.org/W2743105407","https://openalex.org/W2922408859"],"related_works":["https://openalex.org/W2840367830","https://openalex.org/W2159038264","https://openalex.org/W2027177155","https://openalex.org/W1974344026","https://openalex.org/W2168160406","https://openalex.org/W2050630975","https://openalex.org/W2171396485","https://openalex.org/W2048404795","https://openalex.org/W2034858540","https://openalex.org/W2087940846"],"abstract_inverted_index":{"In":[0,19,88],"this":[1,61,89],"work":[2,90],"we":[3,69,91],"focus":[4,92],"on":[5,60,93,130],"the":[6,10,21,53,56,84,94,100,103,113,120,125,131],"problem":[7,35],"associated":[8],"with":[9],"estimation":[11],"of":[12,28,55,83,102,105,115,127],"gene":[13,39],"expression":[14,22],"levels":[15,23],"using":[16,26],"oligonucleotide":[17],"microarrays.":[18],"short,":[20],"are":[24],"measured":[25,132],"sets":[27],"probes":[29,51,98],"that":[30,37],"target":[31],"specific":[32,50,85,116],"gene.":[33],"The":[34],"is":[36,46],"each":[38],"has":[40],"a":[41,64,137],"different":[42],"nucleotide":[43],"structure":[44],"which":[45],"used":[47],"to":[48],"design":[49],"however":[52],"sensitivity":[54],"measurement":[57],"also":[58],"depends":[59],"sequence.":[62,122],"As":[63],"result":[65],"for":[66,139],"some":[67],"genes":[68],"may":[70],"receive":[71],"higher":[72],"or":[73],"lower":[74],"signal":[75,133],"level":[76,134],"then":[77],"it":[78],"should":[79],"be":[80],"just":[81],"because":[82],"probe":[86,121],"structure.":[87],"two":[95],"most":[96],"important":[97],"features:":[99],"sum":[101],"number":[104],"G":[106],"and":[107,135],"C":[108],"nucleotides":[109],"as":[110,112],"well":[111],"occurrence":[114],"sequence":[117],"motif":[118],"in":[119],"We":[123],"show":[124],"impact":[126],"those":[128],"features":[129],"propose":[136],"method":[138],"correcting":[140],"errors":[141],"introduced":[142],"by":[143],"these":[144],"features.":[145]},"counts_by_year":[],"updated_date":"2026-06-26T08:34:08.712188","created_date":"2025-10-10T00:00:00"}
