{"id":"https://openalex.org/W2042426679","doi":"https://doi.org/10.1109/icsmc.2011.6083841","title":"Prediction of protein translation initiation site from the perspective of imbalanced classes","display_name":"Prediction of protein translation initiation site from the perspective of imbalanced classes","publication_year":2011,"publication_date":"2011-10-01","ids":{"openalex":"https://openalex.org/W2042426679","doi":"https://doi.org/10.1109/icsmc.2011.6083841","mag":"2042426679"},"language":"en","primary_location":{"id":"doi:10.1109/icsmc.2011.6083841","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icsmc.2011.6083841","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Conference on Systems, Man, and Cybernetics","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066620217","display_name":"Felipe Teixeira","orcid":null},"institutions":[{"id":"https://openalex.org/I166595947","display_name":"Federal University of S\u00e3o Jo\u00e3o del-Rei","ror":"https://ror.org/03vrj4p82","country_code":"BR","type":"education","lineage":["https://openalex.org/I166595947"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Felipe Carvalho de Souza Teixeira","raw_affiliation_strings":["Departamento de Ci\u00eancia da Computa\u00e7\u00e3o, Universidade Federal de S\u00e3o Jo\u00e3o del-Rei-MG, UFSJ, Sao Joao del-Rei, Brazil","Universidade Federal de S\u00e3o Jo\u00e3o del-Rei-MG, Departamento de Ci\u00eancia da Computa\u00e7\u00e3o - UFSJ, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Ci\u00eancia da Computa\u00e7\u00e3o, Universidade Federal de S\u00e3o Jo\u00e3o del-Rei-MG, UFSJ, Sao Joao del-Rei, Brazil","institution_ids":["https://openalex.org/I166595947"]},{"raw_affiliation_string":"Universidade Federal de S\u00e3o Jo\u00e3o del-Rei-MG, Departamento de Ci\u00eancia da Computa\u00e7\u00e3o - UFSJ, Brazil","institution_ids":["https://openalex.org/I166595947"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048437524","display_name":"Cristiane Neri Nobre","orcid":"https://orcid.org/0000-0001-8517-9852"},"institutions":[{"id":"https://openalex.org/I166595947","display_name":"Federal University of S\u00e3o Jo\u00e3o del-Rei","ror":"https://ror.org/03vrj4p82","country_code":"BR","type":"education","lineage":["https://openalex.org/I166595947"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Cristiane Neri Nobre","raw_affiliation_strings":["Departamento de Ci\u00eancia da Computa\u00e7\u00e3o, Universidade Federal de S\u00e3o Jo\u00e3o del-Rei-MG, UFSJ, Sao Joao del-Rei, Brazil","Universidade Federal de S\u00e3o Jo\u00e3o del-Rei-MG, Departamento de Ci\u00eancia da Computa\u00e7\u00e3o - UFSJ, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Ci\u00eancia da Computa\u00e7\u00e3o, Universidade Federal de S\u00e3o Jo\u00e3o del-Rei-MG, UFSJ, Sao Joao del-Rei, Brazil","institution_ids":["https://openalex.org/I166595947"]},{"raw_affiliation_string":"Universidade Federal de S\u00e3o Jo\u00e3o del-Rei-MG, Departamento de Ci\u00eancia da Computa\u00e7\u00e3o - UFSJ, Brazil","institution_ids":["https://openalex.org/I166595947"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003401466","display_name":"L\u00edvia M\u00e1rcia Silva","orcid":null},"institutions":[{"id":"https://openalex.org/I170935008","display_name":"Pontif\u00edcia Universidade Cat\u00f3lica de Minas Gerais","ror":"https://ror.org/03j1rr444","country_code":"BR","type":"education","lineage":["https://openalex.org/I170935008"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Livia Marcia Silva","raw_affiliation_strings":["Instituto de Inform\u00e1tica, Pontif\u00edcia Universidade Cat\u00f3lica de Minas Gerais-MG, PUCMINAS, Belo Horizonte, Brazil","Pontif\u00edcia Universidade Cat\u00f3lica de Minas Gerais-MG, Instituto de Inform\u00e1tica, PUCMINAS, Belo Horizonte, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto de Inform\u00e1tica, Pontif\u00edcia Universidade Cat\u00f3lica de Minas Gerais-MG, PUCMINAS, Belo Horizonte, Brazil","institution_ids":["https://openalex.org/I170935008"]},{"raw_affiliation_string":"Pontif\u00edcia Universidade Cat\u00f3lica de Minas Gerais-MG, Instituto de Inform\u00e1tica, PUCMINAS, Belo Horizonte, Brazil","institution_ids":["https://openalex.org/I170935008"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056686523","display_name":"Luis E. Z\u00e1rate","orcid":"https://orcid.org/0000-0001-7063-1658"},"institutions":[{"id":"https://openalex.org/I170935008","display_name":"Pontif\u00edcia Universidade Cat\u00f3lica de Minas Gerais","ror":"https://ror.org/03j1rr444","country_code":"BR","type":"education","lineage":["https://openalex.org/I170935008"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Luis Enrique Zarate","raw_affiliation_strings":["Instituto de Inform\u00e1tica, Pontif\u00edcia Universidade Cat\u00f3lica de Minas Gerais-MG, PUCMINAS, Belo Horizonte, Brazil","Pontif\u00edcia Universidade Cat\u00f3lica de Minas Gerais-MG, Instituto de Inform\u00e1tica, PUCMINAS, Belo Horizonte, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto de Inform\u00e1tica, Pontif\u00edcia Universidade Cat\u00f3lica de Minas Gerais-MG, PUCMINAS, Belo Horizonte, Brazil","institution_ids":["https://openalex.org/I170935008"]},{"raw_affiliation_string":"Pontif\u00edcia Universidade Cat\u00f3lica de Minas Gerais-MG, Instituto de Inform\u00e1tica, PUCMINAS, Belo Horizonte, Brazil","institution_ids":["https://openalex.org/I170935008"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14668282,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1313","last_page":"1318"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11652","display_name":"Imbalanced Data Classification Techniques","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11550","display_name":"Text and Document Classification Technologies","score":0.9725000262260437,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7595252990722656},{"id":"https://openalex.org/keywords/undersampling","display_name":"Undersampling","score":0.7032802700996399},{"id":"https://openalex.org/keywords/translation","display_name":"Translation (biology)","score":0.5395092368125916},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5195375084877014},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5080156326293945},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4893030822277069},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.37211498618125916},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.36521655321121216},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09313401579856873},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08688542246818542}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7595252990722656},{"id":"https://openalex.org/C136536468","wikidata":"https://www.wikidata.org/wiki/Q1225894","display_name":"Undersampling","level":2,"score":0.7032802700996399},{"id":"https://openalex.org/C149364088","wikidata":"https://www.wikidata.org/wiki/Q185917","display_name":"Translation (biology)","level":4,"score":0.5395092368125916},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5195375084877014},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5080156326293945},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4893030822277069},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.37211498618125916},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.36521655321121216},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09313401579856873},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08688542246818542},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/icsmc.2011.6083841","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icsmc.2011.6083841","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Conference on Systems, Man, and Cybernetics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W85350352","https://openalex.org/W1520212375","https://openalex.org/W1541321639","https://openalex.org/W1591261915","https://openalex.org/W1601087766","https://openalex.org/W1654622166","https://openalex.org/W1680392829","https://openalex.org/W1867765825","https://openalex.org/W1940988901","https://openalex.org/W1963789055","https://openalex.org/W1981371363","https://openalex.org/W1983634076","https://openalex.org/W1983716193","https://openalex.org/W1993220166","https://openalex.org/W1994410331","https://openalex.org/W2006561388","https://openalex.org/W2009105413","https://openalex.org/W2053724458","https://openalex.org/W2101530945","https://openalex.org/W2105712140","https://openalex.org/W2114281975","https://openalex.org/W2145991872","https://openalex.org/W2148143831","https://openalex.org/W2168847939","https://openalex.org/W4212883601","https://openalex.org/W6637386731","https://openalex.org/W6640420169","https://openalex.org/W6675248708"],"related_works":["https://openalex.org/W2109073422","https://openalex.org/W2887783772","https://openalex.org/W2101754595","https://openalex.org/W4249381695","https://openalex.org/W2534887053","https://openalex.org/W2026172757","https://openalex.org/W2080076470","https://openalex.org/W4386229954","https://openalex.org/W3174925618","https://openalex.org/W2023978881"],"abstract_inverted_index":{"The":[0],"correct":[1],"prediction":[2],"of":[3,104,109,119],"protein":[4],"translation":[5,33],"initiation":[6,34],"from":[7,70],"messenger":[8],"RNA":[9],"(mRNA)":[10],"is":[11,20,97,112],"an":[12],"important":[13],"activity":[14],"for":[15,55,92],"genomic":[16],"annotation.":[17],"This":[18],"problem":[19],"known":[21,83],"to":[22,60,114],"be":[23],"highly":[24],"imbalanced,":[25],"since":[26],"each":[27],"molecule":[28],"has":[29,50],"a":[30,89,116],"single":[31],"mRNA":[32],"site":[35],"and":[36,78,87],"several":[37],"others":[38],"which":[39,96],"are":[40],"not":[41],"initiator":[42],"AUGs.":[43],"In":[44],"this":[45],"context,":[46],"the":[47,67,71,85,102,107,120],"present":[48,66],"work":[49],"focused":[51],"on":[52,99],"undersampling":[53],"methods":[54,81],"balancing":[56],"class":[57],"distribution":[58],"proposed":[59],"solve":[61],"such":[62],"problem.":[63],"Here,":[64],"we":[65],"results":[68,108],"obtained":[69],"Condensed":[72],"Nearest":[73],"Neighbor":[74],"Rule":[75],"(CNN),":[76],"Tomek,":[77],"random":[79],"sampling":[80],"already":[82],"in":[84],"literature,":[86],"introduce":[88],"new":[90],"one":[91],"balancing,":[93],"namely":[94],"C-Blocks,":[95],"based":[98],"clustering.":[100],"Using":[101],"concept":[103],"Bagging":[105],"[1],":[106],"these":[110],"classifiers":[111],"combined":[113],"obtain":[115],"final":[117],"ranking":[118],"sequence.":[121]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
