{"id":"https://openalex.org/W3160795532","doi":"https://doi.org/10.1109/icpr48806.2021.9412849","title":"On Identification and Retrieval of Near-Duplicate Biological Images: a New Dataset and Protocol","display_name":"On Identification and Retrieval of Near-Duplicate Biological Images: a New Dataset and Protocol","publication_year":2021,"publication_date":"2021-01-10","ids":{"openalex":"https://openalex.org/W3160795532","doi":"https://doi.org/10.1109/icpr48806.2021.9412849","mag":"3160795532"},"language":"en","primary_location":{"id":"doi:10.1109/icpr48806.2021.9412849","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icpr48806.2021.9412849","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 25th International Conference on Pattern Recognition (ICPR)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046661007","display_name":"Thomas Edward Koker","orcid":"https://orcid.org/0000-0001-8861-9788"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"T.E. Koker","raw_affiliation_strings":["Harvard Medical School"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard Medical School","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007279905","display_name":"S.S. Chintapalli","orcid":null},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S.S. Chintapalli","raw_affiliation_strings":["Harvard Medical School"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard Medical School","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049761137","display_name":"S. Wang","orcid":"https://orcid.org/0009-0001-9157-0548"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Wang","raw_affiliation_strings":["Harvard Medical School"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard Medical School","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033758659","display_name":"Beatrice Talbot","orcid":null},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B.A. Talbot","raw_affiliation_strings":["Harvard Medical School"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard Medical School","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052604560","display_name":"D. Wainstock","orcid":null},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Wainstock","raw_affiliation_strings":["Harvard Medical School"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard Medical School","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029778986","display_name":"Marcelo Cicconet","orcid":"https://orcid.org/0000-0003-2649-1509"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Cicconet","raw_affiliation_strings":["Harvard Medical School"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard Medical School","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5105556304","display_name":"M.C. Walsh","orcid":null},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M.C. Walsh","raw_affiliation_strings":["Harvard Medical School"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard Medical School","institution_ids":["https://openalex.org/I136199984"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I136199984"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"3114","last_page":"3121"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10824","display_name":"Image Retrieval and Classification Techniques","score":0.9840999841690063,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9825999736785889,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7860488891601562},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.7101421356201172},{"id":"https://openalex.org/keywords/protocol","display_name":"Protocol (science)","score":0.5940596461296082},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.46007591485977173},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4175110459327698},{"id":"https://openalex.org/keywords/image-retrieval","display_name":"Image retrieval","score":0.41300612688064575},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.40888655185699463},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37696442008018494},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.16428247094154358},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.07118090987205505},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.060438841581344604}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7860488891601562},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7101421356201172},{"id":"https://openalex.org/C2780385302","wikidata":"https://www.wikidata.org/wiki/Q367158","display_name":"Protocol (science)","level":3,"score":0.5940596461296082},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.46007591485977173},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4175110459327698},{"id":"https://openalex.org/C1667742","wikidata":"https://www.wikidata.org/wiki/Q10927554","display_name":"Image retrieval","level":3,"score":0.41300612688064575},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.40888655185699463},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37696442008018494},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.16428247094154358},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.07118090987205505},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.060438841581344604},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/icpr48806.2021.9412849","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icpr48806.2021.9412849","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 25th International Conference on Pattern Recognition (ICPR)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1686810756","https://openalex.org/W1861492603","https://openalex.org/W1989319638","https://openalex.org/W2007290502","https://openalex.org/W2055289292","https://openalex.org/W2062848942","https://openalex.org/W2080266750","https://openalex.org/W2081670464","https://openalex.org/W2138833446","https://openalex.org/W2151103935","https://openalex.org/W2155653793","https://openalex.org/W2155803963","https://openalex.org/W2194775991","https://openalex.org/W2296119343","https://openalex.org/W2338908902","https://openalex.org/W2418392267","https://openalex.org/W2544587078","https://openalex.org/W2549837027","https://openalex.org/W2783543328","https://openalex.org/W2810419619","https://openalex.org/W2921316190","https://openalex.org/W2944356404","https://openalex.org/W2949505195","https://openalex.org/W2962797452","https://openalex.org/W2963157250","https://openalex.org/W2963588253","https://openalex.org/W3000942725","https://openalex.org/W3160851792","https://openalex.org/W4243625505","https://openalex.org/W6958808831"],"related_works":["https://openalex.org/W2898732673","https://openalex.org/W2410053581","https://openalex.org/W2383658677","https://openalex.org/W3123203398","https://openalex.org/W1972473893","https://openalex.org/W2466435674","https://openalex.org/W2765200542","https://openalex.org/W2367893528","https://openalex.org/W3107784576","https://openalex.org/W242750434"],"abstract_inverted_index":{"Manipulation":[0],"and":[1,44,67,69,78,114,144,153],"re-use":[2],"of":[3,110],"images":[4],"in":[5,23],"scientific":[6],"publications":[7],"is":[8],"a":[9,36,127,137],"growing":[10],"issue,":[11],"not":[12],"only":[13],"for":[14,19,58,65,74,81,129,140],"biomedical":[15,50],"publishers,":[16],"but":[17],"also":[18],"the":[20,82,103],"research":[21],"community":[22],"general.":[24],"In":[25,132],"this":[26],"work":[27],"we":[28,134],"introduce":[29],"BINDER":[30,52],"-":[31],"Bio-Image":[32],"Near-Duplicate":[33],"Examples":[34],"Repository,":[35],"novel":[37,108],"dataset":[38,104,152],"to":[39,47,105,121],"help":[40],"researchers":[41],"develop,":[42],"train,":[43],"test":[45],"models":[46,117],"detect":[48],"same-source":[49],"images.":[51],"contains":[53],"7,490":[54],"unique":[55],"image":[56,75,112,142],"patches":[57,85],"model":[59],"training,":[60],"1,821":[61],"same-size":[62],"patch":[63],"duplicates":[64],"validation":[66,77],"testing,":[68],"868":[70],"different-size":[71],"image/patch":[72],"pairs":[73],"retrieval":[76,113,145],"testing.":[79],"Except":[80],"training":[83,149],"set,":[84],"already":[86],"contain":[87],"manipulations":[88],"including":[89],"rotation,":[90],"translation,":[91],"scale,":[92],"perspective":[93],"transform,":[94],"contrast":[95],"adjustment":[96],"and/or":[97],"compression":[98],"artifacts.":[99],"We":[100],"further":[101],"use":[102],"demonstrate":[106],"how":[107],"adaptations":[109],"existing":[111],"metric":[115],"learning":[116],"can":[118],"be":[119],"applied":[120],"achieve":[122],"high-accuracy":[123],"inference":[124],"results,":[125],"creating":[126],"baseline":[128],"future":[130],"work.":[131],"aggregate,":[133],"thus":[135],"present":[136],"supervised":[138],"protocol":[139],"near-duplicate":[141],"identification":[143],"without":[146],"any":[147],"\u201creal-world\u201d":[148],"example.":[150],"Our":[151],"source":[154],"code":[155],"are":[156],"available":[157],"at":[158],"hms-idac.github.io/BINDER.":[159]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2022,"cited_by_count":2}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
