{"id":"https://openalex.org/W3162834281","doi":"https://doi.org/10.1109/icpr48806.2021.9412824","title":"Classifying Breast Histopathology Images with a Ductal Instance-Oriented Pipeline","display_name":"Classifying Breast Histopathology Images with a Ductal Instance-Oriented Pipeline","publication_year":2021,"publication_date":"2021-01-10","ids":{"openalex":"https://openalex.org/W3162834281","doi":"https://doi.org/10.1109/icpr48806.2021.9412824","mag":"3162834281","pmid":"https://pubmed.ncbi.nlm.nih.gov/36745147"},"language":"en","primary_location":{"id":"doi:10.1109/icpr48806.2021.9412824","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icpr48806.2021.9412824","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 25th International Conference on Pattern Recognition (ICPR)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9893896","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028849793","display_name":"Beibin Li","orcid":"https://orcid.org/0000-0002-4426-3449"},"institutions":[{"id":"https://openalex.org/I1295499534","display_name":"Seattle Children's Hospital","ror":"https://ror.org/01njes783","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1295499534"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Beibin Li","raw_affiliation_strings":["Seattle Children's Hospital, Seattle, WA","University of Washington, Seattle, WA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Seattle Children's Hospital, Seattle, WA","institution_ids":["https://openalex.org/I1295499534"]},{"raw_affiliation_string":"University of Washington, Seattle, WA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010427214","display_name":"Ezgi Mercan","orcid":"https://orcid.org/0000-0001-6920-048X"},"institutions":[{"id":"https://openalex.org/I1295499534","display_name":"Seattle Children's Hospital","ror":"https://ror.org/01njes783","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1295499534"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ezgi Mercan","raw_affiliation_strings":["Seattle Children's Hospital, Seattle, WA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Seattle Children's Hospital, Seattle, WA","institution_ids":["https://openalex.org/I1295499534"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074132108","display_name":"Sachin Mehta","orcid":"https://orcid.org/0000-0002-5420-4725"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sachin Mehta","raw_affiliation_strings":["University of Washington, Seattle, WA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Washington, Seattle, WA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017523626","display_name":"Stevan R. Knezevich","orcid":null},"institutions":[{"id":"https://openalex.org/I4210151488","display_name":"Clovis Oncology (United States)","ror":"https://ror.org/04ps4d441","country_code":"US","type":"company","lineage":["https://openalex.org/I4210151488"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stevan Knezevich","raw_affiliation_strings":["Pathology Associates, Clovis, CA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Pathology Associates, Clovis, CA","institution_ids":["https://openalex.org/I4210151488"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001751044","display_name":"Corey Arnold","orcid":"https://orcid.org/0000-0002-4119-8143"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Corey W. Arnold","raw_affiliation_strings":["University of California, Los Angles, CA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Los Angles, CA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066330260","display_name":"Donald L. Weaver","orcid":"https://orcid.org/0000-0002-2065-7187"},"institutions":[{"id":"https://openalex.org/I111236770","display_name":"University of Vermont","ror":"https://ror.org/0155zta11","country_code":"US","type":"education","lineage":["https://openalex.org/I111236770"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Donald L. Weaver","raw_affiliation_strings":["University of Vermont, Burlington, VT"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Vermont, Burlington, VT","institution_ids":["https://openalex.org/I111236770"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040878044","display_name":"Joann G. Elmore","orcid":"https://orcid.org/0000-0002-7311-6835"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joann G. Elmore","raw_affiliation_strings":["University of California, Los Angles, CA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California, Los Angles, CA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076121553","display_name":"Linda G. Shapiro","orcid":"https://orcid.org/0000-0002-9495-0968"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Linda G. Shapiro","raw_affiliation_strings":["University of Washington, Seattle, WA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Washington, Seattle, WA","institution_ids":["https://openalex.org/I201448701"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.6997,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.75750929,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"2017","issue":null,"first_page":"8727","last_page":"8734"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12702","display_name":"Brain Tumor Detection and Classification","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/2808","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/histopathology","display_name":"Histopathology","score":0.6261690258979797},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6159290075302124},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4968009293079376},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4948806166648865},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.38728833198547363},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.13032397627830505},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1215728223323822},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.10967549681663513}],"concepts":[{"id":"https://openalex.org/C544855455","wikidata":"https://www.wikidata.org/wiki/Q1070952","display_name":"Histopathology","level":2,"score":0.6261690258979797},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6159290075302124},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4968009293079376},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4948806166648865},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.38728833198547363},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.13032397627830505},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1215728223323822},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.10967549681663513}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/icpr48806.2021.9412824","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icpr48806.2021.9412824","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 25th International Conference on Pattern Recognition (ICPR)","raw_type":"proceedings-article"},{"id":"pmid:36745147","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36745147","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the ... IAPR International Conference on Pattern Recognition. International Conference on Pattern Recognition","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9893896","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9893896","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc IAPR Int Conf Pattern Recogn","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:9893896","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9893896","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc IAPR Int Conf Pattern Recogn","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W1966735833","https://openalex.org/W1975427119","https://openalex.org/W2062758226","https://openalex.org/W2148309496","https://openalex.org/W2194775991","https://openalex.org/W2261730215","https://openalex.org/W2307809763","https://openalex.org/W2698626679","https://openalex.org/W2746267047","https://openalex.org/W2746791238","https://openalex.org/W2762672048","https://openalex.org/W2768453707","https://openalex.org/W2786974903","https://openalex.org/W2788562687","https://openalex.org/W2792527495","https://openalex.org/W2807045376","https://openalex.org/W2807585993","https://openalex.org/W2883567318","https://openalex.org/W2891253216","https://openalex.org/W2898020899","https://openalex.org/W2917989249","https://openalex.org/W2924361103","https://openalex.org/W2947078801","https://openalex.org/W2962862931","https://openalex.org/W2963150697","https://openalex.org/W2963418739","https://openalex.org/W2964150021","https://openalex.org/W2964252887","https://openalex.org/W2967127264","https://openalex.org/W2971013993","https://openalex.org/W2977942577","https://openalex.org/W2998175747","https://openalex.org/W3011769840","https://openalex.org/W3013753460","https://openalex.org/W3014795415","https://openalex.org/W3021359142","https://openalex.org/W3027538410","https://openalex.org/W3099201107","https://openalex.org/W4300812599","https://openalex.org/W6737947904","https://openalex.org/W6748314856","https://openalex.org/W6749046737"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W3039419443","https://openalex.org/W4386772532","https://openalex.org/W4393212117","https://openalex.org/W2115661411","https://openalex.org/W2399391471","https://openalex.org/W2400254106","https://openalex.org/W2033914206","https://openalex.org/W2042327336"],"abstract_inverted_index":{"In":[0],"this":[1,107,145],"study,":[2],"we":[3],"propose":[4],"the":[5,37,60,76,79,94,98,121,140,148],"Ductal":[6],"Instance-Oriented":[7],"Pipeline":[8],"(DIOP)":[9],"that":[10],"contains":[11],"a":[12,17,51,115],"duct-level":[13,42],"instance":[14,34],"segmentation":[15,20,35],"model,":[16,21,40],"tissue-level":[18,57],"semantic":[19],"and":[22,36,74,87,142],"three-levels":[23],"of":[24,67,144],"features":[25],"for":[26,93],"diagnostic":[27,91],"classification.":[28],"Based":[29],"on":[30,129],"recent":[31],"advancements":[32],"in":[33,89,106,120,147],"Mask":[38],"RCNN":[39],"our":[41],"segmenter":[43],"tries":[44],"to":[45,103,118,138],"identify":[46],"each":[47],"ductal":[48,62,72],"individual":[49],"inside":[50],"microscopic":[52],"image;":[53],"then,":[54],"it":[55],"extracts":[56],"information":[58,68],"from":[59,70],"identified":[61],"instances.":[63],"Leveraging":[64],"three":[65],"levels":[66],"obtained":[69],"these":[71],"instances":[73],"also":[75],"histopathology":[77],"image,":[78],"proposed":[80,111],"DIOP":[81,99,112],"outperforms":[82],"previous":[83],"approaches":[84],"(both":[85],"feature-based":[86],"CNN-based)":[88],"all":[90],"tasks;":[92],"four-way":[95],"classification":[96],"task,":[97],"achieves":[100],"comparable":[101],"performance":[102],"general":[104],"pathologists":[105],"unique":[108],"dataset.":[109],"The":[110],"only":[113],"takes":[114],"few":[116],"seconds":[117],"run":[119],"inference":[122],"time,":[123],"which":[124],"could":[125],"be":[126],"used":[127],"interactively":[128],"most":[130],"modern":[131],"computers.":[132],"More":[133],"clinical":[134],"explorations":[135],"are":[136],"needed":[137],"study":[139],"robustness":[141],"generalizability":[143],"system":[146],"future.":[149]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
