{"id":"https://openalex.org/W1987279266","doi":"https://doi.org/10.1109/icpr.2014.405","title":"S-BLOSUM: Classification of 2D Shapes with Biological Sequence Alignment","display_name":"S-BLOSUM: Classification of 2D Shapes with Biological Sequence Alignment","publication_year":2014,"publication_date":"2014-08-01","ids":{"openalex":"https://openalex.org/W1987279266","doi":"https://doi.org/10.1109/icpr.2014.405","mag":"1987279266"},"language":"en","primary_location":{"id":"doi:10.1109/icpr.2014.405","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icpr.2014.405","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 22nd International Conference on Pattern Recognition","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028591679","display_name":"Pietro Lovato","orcid":"https://orcid.org/0000-0002-1002-5434"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Pietro Lovato","raw_affiliation_strings":["Department of Computer Science, University of Verona, Verona, ITALY","Department of Computer Science \u2013 University of Verona, Verona, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Verona, Verona, ITALY","institution_ids":["https://openalex.org/I119439378"]},{"raw_affiliation_string":"Department of Computer Science \u2013 University of Verona, Verona, Italy","institution_ids":["https://openalex.org/I119439378"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056939276","display_name":"Alessio Milanese","orcid":"https://orcid.org/0000-0002-7050-2239"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alessio Milanese","raw_affiliation_strings":["Department of Biotechnology, University of Verona, Verona, ITALY","Dept. of Biotechnol., Univ. of Verona, Verona, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, University of Verona, Verona, ITALY","institution_ids":["https://openalex.org/I119439378"]},{"raw_affiliation_string":"Dept. of Biotechnol., Univ. of Verona, Verona, Italy","institution_ids":["https://openalex.org/I119439378"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027565025","display_name":"Cesare Centomo","orcid":null},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Cesare Centomo","raw_affiliation_strings":["Universita degli Studi di Verona, Verona, Veneto, IT","Dept. of Biotechnol., Univ. of Verona, Verona, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universita degli Studi di Verona, Verona, Veneto, IT","institution_ids":["https://openalex.org/I119439378"]},{"raw_affiliation_string":"Dept. of Biotechnol., Univ. of Verona, Verona, Italy","institution_ids":["https://openalex.org/I119439378"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101510898","display_name":"Alejandro Giorgetti","orcid":"https://orcid.org/0000-0001-8738-6150"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alejandro Giorgetti","raw_affiliation_strings":["Department of Biotechnology, University of Verona, Verona, ITALY","Dept. of Biotechnol., Univ. of Verona, Verona, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, University of Verona, Verona, ITALY","institution_ids":["https://openalex.org/I119439378"]},{"raw_affiliation_string":"Dept. of Biotechnol., Univ. of Verona, Verona, Italy","institution_ids":["https://openalex.org/I119439378"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011831938","display_name":"Manuele Bicego","orcid":"https://orcid.org/0000-0002-1008-3917"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Manuele Bicego","raw_affiliation_strings":["Department of Computer Science, University of Verona, Verona, ITALY","Department of Computer Science \u2013 University of Verona, Verona, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Verona, Verona, ITALY","institution_ids":["https://openalex.org/I119439378"]},{"raw_affiliation_string":"Department of Computer Science \u2013 University of Verona, Verona, Italy","institution_ids":["https://openalex.org/I119439378"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I119439378"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"5","issue":null,"first_page":"2335","last_page":"2340"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10824","display_name":"Image Retrieval and Classification Techniques","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9812999963760376,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7401154637336731},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.689154863357544},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6625148057937622},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6509289741516113},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.61179518699646},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5259078741073608},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.525020182132721},{"id":"https://openalex.org/keywords/matrix","display_name":"Matrix (chemical analysis)","score":0.5195367932319641},{"id":"https://openalex.org/keywords/matrix-representation","display_name":"Matrix representation","score":0.4404948949813843},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33835121989250183},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.33174440264701843},{"id":"https://openalex.org/keywords/group","display_name":"Group (periodic table)","score":0.08734959363937378}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7401154637336731},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.689154863357544},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6625148057937622},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6509289741516113},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.61179518699646},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5259078741073608},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.525020182132721},{"id":"https://openalex.org/C106487976","wikidata":"https://www.wikidata.org/wiki/Q685816","display_name":"Matrix (chemical analysis)","level":2,"score":0.5195367932319641},{"id":"https://openalex.org/C103275481","wikidata":"https://www.wikidata.org/wiki/Q6787889","display_name":"Matrix representation","level":3,"score":0.4404948949813843},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33835121989250183},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.33174440264701843},{"id":"https://openalex.org/C2781311116","wikidata":"https://www.wikidata.org/wiki/Q83306","display_name":"Group (periodic table)","level":2,"score":0.08734959363937378},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/icpr.2014.405","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icpr.2014.405","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 22nd International Conference on Pattern Recognition","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W147723833","https://openalex.org/W164528648","https://openalex.org/W1498183065","https://openalex.org/W1531055819","https://openalex.org/W1570052007","https://openalex.org/W1793673267","https://openalex.org/W1967925628","https://openalex.org/W2026480276","https://openalex.org/W2027075083","https://openalex.org/W2045915581","https://openalex.org/W2055043387","https://openalex.org/W2074231493","https://openalex.org/W2087064593","https://openalex.org/W2097827365","https://openalex.org/W2106882534","https://openalex.org/W2108556791","https://openalex.org/W2110518837","https://openalex.org/W2111574755","https://openalex.org/W2112074816","https://openalex.org/W2126604179","https://openalex.org/W2137161518","https://openalex.org/W2143210482","https://openalex.org/W2159049248","https://openalex.org/W2164206608","https://openalex.org/W3023411394","https://openalex.org/W4236236547","https://openalex.org/W6631808785","https://openalex.org/W6683479584","https://openalex.org/W6996882303"],"related_works":["https://openalex.org/W17155033","https://openalex.org/W3207760230","https://openalex.org/W1496222301","https://openalex.org/W1590307681","https://openalex.org/W2536018345","https://openalex.org/W4312814274","https://openalex.org/W2509138561","https://openalex.org/W2783489612","https://openalex.org/W3081697272","https://openalex.org/W2137256705"],"abstract_inverted_index":{"Recent":[0],"works":[1],"investigated":[2],"the":[3,14,23,62,71,75,89,93,103,114,122,126,132,137,144,149,163,166],"possibility":[4],"to":[5,57,68,113,162],"design":[6],"solutions":[7],"for":[8,39,70,125],"pattern":[9,24],"recognition":[10,25],"problems":[11],"by":[12],"exploiting":[13],"huge":[15,34],"amount":[16],"of":[17,36,65,74,105,110,165],"work":[18],"done":[19],"in":[20,29,107],"bioinformatics.":[21],"If":[22],"problem":[26],"is":[27,88,158],"cast":[28],"biological":[30,53,63,145],"terms,":[31],"then":[32],"a":[33,83,140],"range":[35],"algorithms,":[37],"exploitable":[38],"classification,":[40],"detection,":[41],"visualization,":[42],"etc.":[43],"can":[44],"be":[45],"effectively":[46],"borrowed.":[47],"In":[48,79],"this":[49],"paper,":[50],"we":[51,81],"exploit":[52],"sequence":[54,94],"alignment":[55,95],"tools":[56,67],"classify":[58],"2D":[59,76,127],"shapes,":[60],"tailoring":[61],"parameters":[64],"these":[66],"account":[69],"different":[72],"semantic":[73],"shape":[77],"scenario.":[78],"particular,":[80],"propose":[82],"novel":[84],"substitution":[85],"matrix,":[86,99],"which":[87],"crucial":[90],"parameter":[91],"determining":[92],"solution.":[96],"The":[97],"new":[98],"called":[100],"S-BLOSUM,":[101],"learns":[102],"rates":[104],"matches/mismatches":[106],"conserved":[108],"portions":[109],"shapes":[111],"belonging":[112],"same":[115],"category,":[116],"and":[117],"incorporates":[118],"prior":[119],"knowledge":[120],"on":[121,148],"chosen":[123],"representation":[124],"shape.":[128],"On":[129],"one":[130],"hand,":[131,151],"experimental":[133],"evaluation":[134],"showed":[135],"that":[136,155],"S-BLOSUM":[138],"provides":[139],"significant":[141],"improvement":[142],"over":[143],"counterpart":[146],"(BLOSUM),":[147],"other":[150],"classification":[152],"results":[153],"prove":[154],"our":[156],"approach":[157],"competitive":[159],"with":[160],"respect":[161],"state":[164],"art.":[167]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
