{"id":"https://openalex.org/W1999851712","doi":"https://doi.org/10.1109/icnc.2010.5582631","title":"Comparison of HA, NA amino acid sequences of novel influenza virus A/H1N1 and prediction of related B cell epitopes","display_name":"Comparison of HA, NA amino acid sequences of novel influenza virus A/H1N1 and prediction of related B cell epitopes","publication_year":2010,"publication_date":"2010-08-01","ids":{"openalex":"https://openalex.org/W1999851712","doi":"https://doi.org/10.1109/icnc.2010.5582631","mag":"1999851712"},"language":"en","primary_location":{"id":"doi:10.1109/icnc.2010.5582631","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icnc.2010.5582631","pdf_url":null,"source":{"id":"https://openalex.org/S4363608012","display_name":"2010 Sixth International Conference on Natural Computation","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2010 Sixth International Conference on Natural Computation","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054748838","display_name":"Liu ChangWen","orcid":null},"institutions":[{"id":"https://openalex.org/I4210090868","display_name":"Second Affiliated Hospital of Guangzhou Medical University","ror":"https://ror.org/00a98yf63","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210090868"]},{"id":"https://openalex.org/I92039509","display_name":"Guangzhou Medical University","ror":"https://ror.org/00zat6v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I92039509"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Changwen Liu","raw_affiliation_strings":["Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, China","The Second Affiliated Hospital of Guangzhou Medical University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, China","institution_ids":["https://openalex.org/I4210090868","https://openalex.org/I92039509"]},{"raw_affiliation_string":"The Second Affiliated Hospital of Guangzhou Medical University, China","institution_ids":["https://openalex.org/I4210090868","https://openalex.org/I92039509"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067227683","display_name":"Shengtao Li","orcid":null},"institutions":[{"id":"https://openalex.org/I4210090868","display_name":"Second Affiliated Hospital of Guangzhou Medical University","ror":"https://ror.org/00a98yf63","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210090868"]},{"id":"https://openalex.org/I92039509","display_name":"Guangzhou Medical University","ror":"https://ror.org/00zat6v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I92039509"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shengtao Li","raw_affiliation_strings":["Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, China","The Second Affiliated Hospital of Guangzhou Medical University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, China","institution_ids":["https://openalex.org/I4210090868","https://openalex.org/I92039509"]},{"raw_affiliation_string":"The Second Affiliated Hospital of Guangzhou Medical University, China","institution_ids":["https://openalex.org/I4210090868","https://openalex.org/I92039509"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052764415","display_name":"Zehong Zou","orcid":"https://orcid.org/0000-0002-8532-3559"},"institutions":[{"id":"https://openalex.org/I4210090868","display_name":"Second Affiliated Hospital of Guangzhou Medical University","ror":"https://ror.org/00a98yf63","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210090868"]},{"id":"https://openalex.org/I92039509","display_name":"Guangzhou Medical University","ror":"https://ror.org/00zat6v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I92039509"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zehong Zou","raw_affiliation_strings":["Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, China","The Second Affiliated Hospital of Guangzhou Medical University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, China","institution_ids":["https://openalex.org/I4210090868","https://openalex.org/I92039509"]},{"raw_affiliation_string":"The Second Affiliated Hospital of Guangzhou Medical University, China","institution_ids":["https://openalex.org/I4210090868","https://openalex.org/I92039509"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034038396","display_name":"Ailin Tao","orcid":"https://orcid.org/0000-0002-0584-921X"},"institutions":[{"id":"https://openalex.org/I4210090868","display_name":"Second Affiliated Hospital of Guangzhou Medical University","ror":"https://ror.org/00a98yf63","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210090868"]},{"id":"https://openalex.org/I92039509","display_name":"Guangzhou Medical University","ror":"https://ror.org/00zat6v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I92039509"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ailin Tao","raw_affiliation_strings":["Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, China","The Second Affiliated Hospital of Guangzhou Medical University, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, China","institution_ids":["https://openalex.org/I4210090868","https://openalex.org/I92039509"]},{"raw_affiliation_string":"The Second Affiliated Hospital of Guangzhou Medical University, China","institution_ids":["https://openalex.org/I4210090868","https://openalex.org/I92039509"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"21","issue":null,"first_page":"3871","last_page":"3873"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11243","display_name":"Respiratory viral infections research","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epitope","display_name":"Epitope","score":0.8625564575195312},{"id":"https://openalex.org/keywords/antigenicity","display_name":"Antigenicity","score":0.8200657963752747},{"id":"https://openalex.org/keywords/genbank","display_name":"GenBank","score":0.8130971193313599},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.6869529485702515},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.6770914793014526},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.5351384878158569},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5292165875434875},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.527734637260437},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.5139517188072205},{"id":"https://openalex.org/keywords/cowpea-mosaic-virus","display_name":"Cowpea mosaic virus","score":0.511989414691925},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.4842219352722168},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.4468265771865845},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4326792061328888},{"id":"https://openalex.org/keywords/mega","display_name":"Mega-","score":0.4300653040409088},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.395698219537735},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.38730940222740173},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.32776349782943726},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3203888237476349},{"id":"https://openalex.org/keywords/plant-virus","display_name":"Plant virus","score":0.21068602800369263},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17685049772262573}],"concepts":[{"id":"https://openalex.org/C195616568","wikidata":"https://www.wikidata.org/wiki/Q128711","display_name":"Epitope","level":3,"score":0.8625564575195312},{"id":"https://openalex.org/C2779026604","wikidata":"https://www.wikidata.org/wiki/Q4774742","display_name":"Antigenicity","level":3,"score":0.8200657963752747},{"id":"https://openalex.org/C79029880","wikidata":"https://www.wikidata.org/wiki/Q901755","display_name":"GenBank","level":3,"score":0.8130971193313599},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.6869529485702515},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.6770914793014526},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.5351384878158569},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5292165875434875},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.527734637260437},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.5139517188072205},{"id":"https://openalex.org/C2776541148","wikidata":"https://www.wikidata.org/wiki/Q4405221","display_name":"Cowpea mosaic virus","level":4,"score":0.511989414691925},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.4842219352722168},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.4468265771865845},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4326792061328888},{"id":"https://openalex.org/C2781078984","wikidata":"https://www.wikidata.org/wiki/Q107205","display_name":"Mega-","level":2,"score":0.4300653040409088},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.395698219537735},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.38730940222740173},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.32776349782943726},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3203888237476349},{"id":"https://openalex.org/C109110057","wikidata":"https://www.wikidata.org/wiki/Q1495434","display_name":"Plant virus","level":3,"score":0.21068602800369263},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17685049772262573},{"id":"https://openalex.org/C1276947","wikidata":"https://www.wikidata.org/wiki/Q333","display_name":"Astronomy","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/icnc.2010.5582631","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icnc.2010.5582631","pdf_url":null,"source":{"id":"https://openalex.org/S4363608012","display_name":"2010 Sixth International Conference on Natural Computation","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2010 Sixth International Conference on Natural Computation","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.5199999809265137,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W202390675","https://openalex.org/W1975304761","https://openalex.org/W2086885781","https://openalex.org/W2124946306","https://openalex.org/W2134098757","https://openalex.org/W2138582650","https://openalex.org/W2140998261","https://openalex.org/W2153190303","https://openalex.org/W2436216342","https://openalex.org/W2564640125","https://openalex.org/W4205978945"],"related_works":["https://openalex.org/W2051969447","https://openalex.org/W2111937814","https://openalex.org/W2162923930","https://openalex.org/W1482324242","https://openalex.org/W2133116680","https://openalex.org/W2091678889","https://openalex.org/W2029514038","https://openalex.org/W2804480386","https://openalex.org/W3186624150","https://openalex.org/W65850283"],"abstract_inverted_index":{"Objective:":[0],"To":[1],"compare":[2],"the":[3,39,51,105,123,140],"amino":[4,28,52,98],"acid":[5,29,53,99],"sequences":[6,30,54,78],"of":[7,22,31,55,91,107,125],"HA,":[8,23,126],"NA":[9,24,58,86,120,127],"from":[10,43],"novel":[11,33],"influenza":[12,34],"virus":[13,36],"A/H1N1":[14,35],"isolates,":[15],"and":[16,57,64,117,145],"decipher":[17],"possible":[18],"B":[19,67],"cell":[20,68],"epitopes":[21,69],"proteins.":[25],"Methods:":[26],"The":[27],"28":[32],"isolates":[37],"around":[38],"world":[40],"were":[41,47,70],"downloaded":[42],"Genbank.":[44],"Phylogenetic":[45],"trees":[46],"constructed":[48],"based":[49],"on":[50],"HA":[56,76,115],"by":[59],"using":[60],"software":[61],"Clustal":[62],"X":[63],"MEGA":[65],"2.0.":[66],"predicted":[71],"with":[72],"Protean":[73],"software.":[74],"Results:":[75],"protein":[77,87,128],"showed":[79],"a":[80],"relatively":[81,130],"larger":[82],"variation":[83],"comparing":[84],"to":[85],"sequences.":[88],"Nevertheless":[89],"both":[90],"them":[92],"each":[93],"have":[94],"very":[95],"less":[96],"divergent":[97],"residues.":[100],"Software":[101],"prediction":[102],"results":[103],"revealed":[104],"presence":[106],"8":[108],"putative":[109],"antigenic":[110],"regions":[111,134,142],"randomly":[112],"distributed":[113],"throughout":[114,119],"sequence":[116],"12":[118],"sequence.":[121],"Conclusion:":[122],"antigenicity":[124],"is":[129],"stable":[131],"in":[132,143],"certain":[133],"which":[135],"can":[136],"be":[137],"used":[138],"as":[139],"target":[141],"diagnosis":[144],"vaccine":[146],"manufacturing.":[147]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
