{"id":"https://openalex.org/W1990569257","doi":"https://doi.org/10.1109/icmlc.2010.5580719","title":"Modeling and identification of gene regulatory networks: A Granger causality approach","display_name":"Modeling and identification of gene regulatory networks: A Granger causality approach","publication_year":2010,"publication_date":"2010-07-01","ids":{"openalex":"https://openalex.org/W1990569257","doi":"https://doi.org/10.1109/icmlc.2010.5580719","mag":"1990569257"},"language":"en","primary_location":{"id":"doi:10.1109/icmlc.2010.5580719","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icmlc.2010.5580719","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2010 International Conference on Machine Learning and Cybernetics","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087925601","display_name":"Z. G. Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Z. G. Zhang","raw_affiliation_strings":["Department of Electrical and Electronic Engineering, University of Hong Kong, Hong Kong, China","Department of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Electronic Engineering, University of Hong Kong, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Y. S. Hung","orcid":null},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Y. S. Hung","raw_affiliation_strings":["Department of Electrical and Electronic Engineering, University of Hong Kong, Hong Kong, China","Department of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Electronic Engineering, University of Hong Kong, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057049452","display_name":"S. C. Chan","orcid":"https://orcid.org/0000-0001-7212-4182"},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"S. C. Chan","raw_affiliation_strings":["Department of Electrical and Electronic Engineering, University of Hong Kong, Hong Kong, China","Department of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Electronic Engineering, University of Hong Kong, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110751155","display_name":"Wenjing Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"W. C. Xu","raw_affiliation_strings":["Department of Electrical and Electronic Engineering, University of Hong Kong, Hong Kong, China","Department of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Electronic Engineering, University of Hong Kong, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam, Hong Kong, China","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042083053","display_name":"Yong Hu","orcid":"https://orcid.org/0000-0003-0305-5616"},"institutions":[{"id":"https://openalex.org/I4210094324","display_name":"Duchess of Kent Children's Hospital","ror":"https://ror.org/006f92m60","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I1294586568","https://openalex.org/I4210094324"]},{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["CN","HK"],"is_corresponding":false,"raw_author_name":"Y. Hu","raw_affiliation_strings":["Department of Orthopaedics and Traumatology, Duchess of Kent ChildrenE28099s Hospital, University of Hong Kong, Hong Kong, China","Department of Orthopaedics & Traumatology, The University of Hong Kong, Duchess of Kent Children's Hospital, 12 Sandy Bay Road, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Orthopaedics and Traumatology, Duchess of Kent ChildrenE28099s Hospital, University of Hong Kong, Hong Kong, China","institution_ids":["https://openalex.org/I4210094324","https://openalex.org/I889458895"]},{"raw_affiliation_string":"Department of Orthopaedics & Traumatology, The University of Hong Kong, Duchess of Kent Children's Hospital, 12 Sandy Bay Road, Hong Kong, China","institution_ids":["https://openalex.org/I4210094324","https://openalex.org/I889458895"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":3.6944,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.92196193,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"10","issue":null,"first_page":"3073","last_page":"3078"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/granger-causality","display_name":"Granger causality","score":0.739795446395874},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.7048773765563965},{"id":"https://openalex.org/keywords/autoregressive-model","display_name":"Autoregressive model","score":0.6117333173751831},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5897419452667236},{"id":"https://openalex.org/keywords/vector-autoregression","display_name":"Vector autoregression","score":0.5397871732711792},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.5385651588439941},{"id":"https://openalex.org/keywords/time-series","display_name":"Time series","score":0.500952959060669},{"id":"https://openalex.org/keywords/causality","display_name":"Causality (physics)","score":0.48951709270477295},{"id":"https://openalex.org/keywords/curse-of-dimensionality","display_name":"Curse of dimensionality","score":0.4838370382785797},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.4782651662826538},{"id":"https://openalex.org/keywords/variable","display_name":"Variable (mathematics)","score":0.4595983624458313},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4529024064540863},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.42011672258377075},{"id":"https://openalex.org/keywords/model-selection","display_name":"Model selection","score":0.41189703345298767},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.34633228182792664},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.342923641204834},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.33293449878692627},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.29289066791534424},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.24570342898368835},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2303902506828308},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21748420596122742},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11949104070663452}],"concepts":[{"id":"https://openalex.org/C129824826","wikidata":"https://www.wikidata.org/wiki/Q2630107","display_name":"Granger causality","level":2,"score":0.739795446395874},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7048773765563965},{"id":"https://openalex.org/C159877910","wikidata":"https://www.wikidata.org/wiki/Q2202883","display_name":"Autoregressive model","level":2,"score":0.6117333173751831},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5897419452667236},{"id":"https://openalex.org/C133029050","wikidata":"https://www.wikidata.org/wiki/Q385593","display_name":"Vector autoregression","level":2,"score":0.5397871732711792},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.5385651588439941},{"id":"https://openalex.org/C151406439","wikidata":"https://www.wikidata.org/wiki/Q186588","display_name":"Time series","level":2,"score":0.500952959060669},{"id":"https://openalex.org/C64357122","wikidata":"https://www.wikidata.org/wiki/Q1149766","display_name":"Causality (physics)","level":2,"score":0.48951709270477295},{"id":"https://openalex.org/C111030470","wikidata":"https://www.wikidata.org/wiki/Q1430460","display_name":"Curse of dimensionality","level":2,"score":0.4838370382785797},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.4782651662826538},{"id":"https://openalex.org/C182365436","wikidata":"https://www.wikidata.org/wiki/Q50701","display_name":"Variable (mathematics)","level":2,"score":0.4595983624458313},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4529024064540863},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.42011672258377075},{"id":"https://openalex.org/C93959086","wikidata":"https://www.wikidata.org/wiki/Q6888345","display_name":"Model selection","level":2,"score":0.41189703345298767},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34633228182792664},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.342923641204834},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.33293449878692627},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.29289066791534424},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.24570342898368835},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2303902506828308},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21748420596122742},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11949104070663452},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/icmlc.2010.5580719","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icmlc.2010.5580719","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2010 International Conference on Machine Learning and Cybernetics","raw_type":"proceedings-article"},{"id":"pmh:oai:hub.hku.hk:10722/143347","is_oa":false,"landing_page_url":"http://hdl.handle.net/10722/143347","pdf_url":null,"source":{"id":"https://openalex.org/S4377196271","display_name":"The HKU Scholars Hub (University of Hong Kong)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I889458895","host_organization_name":"University of Hong Kong","host_organization_lineage":["https://openalex.org/I889458895"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference_Paper"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322170","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1963672021","https://openalex.org/W1969008680","https://openalex.org/W1981547652","https://openalex.org/W1983965569","https://openalex.org/W1992165506","https://openalex.org/W1997320407","https://openalex.org/W2021786299","https://openalex.org/W2033284638","https://openalex.org/W2049058758","https://openalex.org/W2060393046","https://openalex.org/W2062029454","https://openalex.org/W2065515536","https://openalex.org/W2070672503","https://openalex.org/W2074682976","https://openalex.org/W2099235429","https://openalex.org/W2101094851","https://openalex.org/W2101296410","https://openalex.org/W2101567517","https://openalex.org/W2116018370","https://openalex.org/W2116063398","https://openalex.org/W2118328021","https://openalex.org/W2122825543","https://openalex.org/W2125951014","https://openalex.org/W2132663737","https://openalex.org/W2135046866","https://openalex.org/W2137317896","https://openalex.org/W2138049103","https://openalex.org/W2142170851","https://openalex.org/W2149846618","https://openalex.org/W2178225550","https://openalex.org/W2798823272","https://openalex.org/W6680156768"],"related_works":["https://openalex.org/W4296209631","https://openalex.org/W2961694600","https://openalex.org/W2912343539","https://openalex.org/W2997621663","https://openalex.org/W3125259513","https://openalex.org/W2549115975","https://openalex.org/W2357952031","https://openalex.org/W3118945149","https://openalex.org/W2356268820","https://openalex.org/W4321854976"],"abstract_inverted_index":{"It":[0],"is":[1,38,72],"of":[2,27,69,76,81,110],"increasing":[3],"interest":[4],"in":[5,86,120],"systems":[6],"biology":[7],"to":[8,19],"discover":[9],"gene":[10,30],"regulatory":[11],"networks":[12],"(GRNs)":[13],"from":[14,59],"time-series":[15,46],"genomic":[16,47],"data,":[17],"i.e.,":[18],"explore":[20],"the":[21,45,57,60,73,122,142],"interactions":[22],"among":[23],"a":[24,50,128],"large":[25],"number":[26,80],"genes":[28,77],"and":[29,55,78,90,96,113,145],"products":[31],"over":[32],"time.":[33],"Currently,":[34],"one":[35],"common":[36],"approach":[37],"based":[39],"on":[40],"Granger":[41],"causality,":[42],"which":[43,84,133],"models":[44,71,119],"data":[48],"as":[49],"vector":[51],"autoregressive":[52],"(VAR)":[53],"process":[54],"estimates":[56],"GRNs":[58,123,137],"VAR":[61,70,118,130],"coefficient":[62],"matrix.":[63],"The":[64],"main":[65],"challenge":[66],"for":[67,117,135],"identification":[68,111,147],"high":[74,91],"dimensionality":[75],"limited":[79],"time":[82,140],"points,":[83],"results":[85],"statistically":[87],"inefficient":[88],"solution":[89],"computational":[92],"complexity.":[93],"Therefore,":[94],"fast":[95],"efficient":[97],"variable":[98,114],"selection":[99,115],"techniques":[100,116],"are":[101,149],"highly":[102],"desirable.":[103],"In":[104],"this":[105],"paper,":[106],"an":[107],"introductory":[108],"review":[109],"methods":[112,148],"learning":[121],"will":[124],"be":[125],"presented.":[126],"Furthermore,":[127],"dynamic":[129,136],"(DVAR)":[131],"model,":[132],"accounts":[134],"changing":[138],"with":[139],"during":[141],"experimental":[143],"cycle,":[144],"its":[146],"introduced.":[150]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2016-06-24T00:00:00"}
