{"id":"https://openalex.org/W4386597591","doi":"https://doi.org/10.1109/icip49359.2023.10222930","title":"HER2-Sish Histopathology Image Classification Using Deep Neural Networks","display_name":"HER2-Sish Histopathology Image Classification Using Deep Neural Networks","publication_year":2023,"publication_date":"2023-09-11","ids":{"openalex":"https://openalex.org/W4386597591","doi":"https://doi.org/10.1109/icip49359.2023.10222930"},"language":"en","primary_location":{"id":"doi:10.1109/icip49359.2023.10222930","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/icip49359.2023.10222930","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE International Conference on Image Processing (ICIP)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059926621","display_name":"Choo Hui Tan","orcid":null},"institutions":[{"id":"https://openalex.org/I173029219","display_name":"Multimedia University","ror":"https://ror.org/04zrbnc33","country_code":"MY","type":"education","lineage":["https://openalex.org/I173029219"]}],"countries":["MY"],"is_corresponding":true,"raw_author_name":"Choo Hui Tan","raw_affiliation_strings":["Multimedia University,Faculty of Computing and Informatics,Cyberjaya,Malaysia","Faculty of Computing and Informatics, Multimedia University, Cyberjaya, Malaysia"],"affiliations":[{"raw_affiliation_string":"Multimedia University,Faculty of Computing and Informatics,Cyberjaya,Malaysia","institution_ids":["https://openalex.org/I173029219"]},{"raw_affiliation_string":"Faculty of Computing and Informatics, Multimedia University, Cyberjaya, Malaysia","institution_ids":["https://openalex.org/I173029219"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010264337","display_name":"Wei Jie Lim","orcid":"https://orcid.org/0000-0001-7867-3641"},"institutions":[{"id":"https://openalex.org/I173029219","display_name":"Multimedia University","ror":"https://ror.org/04zrbnc33","country_code":"MY","type":"education","lineage":["https://openalex.org/I173029219"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Wei Jie Lim","raw_affiliation_strings":["Multimedia University,Faculty of Computing and Informatics,Cyberjaya,Malaysia","Faculty of Computing and Informatics, Multimedia University, Cyberjaya, Malaysia"],"affiliations":[{"raw_affiliation_string":"Multimedia University,Faculty of Computing and Informatics,Cyberjaya,Malaysia","institution_ids":["https://openalex.org/I173029219"]},{"raw_affiliation_string":"Faculty of Computing and Informatics, Multimedia University, Cyberjaya, Malaysia","institution_ids":["https://openalex.org/I173029219"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002757668","display_name":"Wan Siti Halimatul Munirah Wan Ahmad","orcid":"https://orcid.org/0000-0001-6364-6341"},"institutions":[{"id":"https://openalex.org/I173029219","display_name":"Multimedia University","ror":"https://ror.org/04zrbnc33","country_code":"MY","type":"education","lineage":["https://openalex.org/I173029219"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Wan Siti Halimatul Munirah Wan Ahmad","raw_affiliation_strings":["Multimedia University,Faculty of Engineering,Cyberjaya,Malaysia","Faculty of Engineering, Multimedia University, Cyberjaya, Malaysia"],"affiliations":[{"raw_affiliation_string":"Multimedia University,Faculty of Engineering,Cyberjaya,Malaysia","institution_ids":["https://openalex.org/I173029219"]},{"raw_affiliation_string":"Faculty of Engineering, Multimedia University, Cyberjaya, Malaysia","institution_ids":["https://openalex.org/I173029219"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046326626","display_name":"Lai-Kuan Wong","orcid":null},"institutions":[{"id":"https://openalex.org/I173029219","display_name":"Multimedia University","ror":"https://ror.org/04zrbnc33","country_code":"MY","type":"education","lineage":["https://openalex.org/I173029219"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Lai-Kuan Wong","raw_affiliation_strings":["Multimedia University,Faculty of Computing and Informatics,Cyberjaya,Malaysia","Faculty of Computing and Informatics, Multimedia University, Cyberjaya, Malaysia"],"affiliations":[{"raw_affiliation_string":"Multimedia University,Faculty of Computing and Informatics,Cyberjaya,Malaysia","institution_ids":["https://openalex.org/I173029219"]},{"raw_affiliation_string":"Faculty of Computing and Informatics, Multimedia University, Cyberjaya, Malaysia","institution_ids":["https://openalex.org/I173029219"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091147672","display_name":"Zaka Ur Rehman","orcid":"https://orcid.org/0000-0003-1341-6366"},"institutions":[{"id":"https://openalex.org/I173029219","display_name":"Multimedia University","ror":"https://ror.org/04zrbnc33","country_code":"MY","type":"education","lineage":["https://openalex.org/I173029219"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Zaka Ur Rehman","raw_affiliation_strings":["Multimedia University,Faculty of Engineering,Cyberjaya,Malaysia","Faculty of Engineering, Multimedia University, Cyberjaya, Malaysia"],"affiliations":[{"raw_affiliation_string":"Multimedia University,Faculty of Engineering,Cyberjaya,Malaysia","institution_ids":["https://openalex.org/I173029219"]},{"raw_affiliation_string":"Faculty of Engineering, Multimedia University, Cyberjaya, Malaysia","institution_ids":["https://openalex.org/I173029219"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005236363","display_name":"Lai\u2010Meng Looi","orcid":"https://orcid.org/0000-0001-8325-0117"},"institutions":[{"id":"https://openalex.org/I1296788130","display_name":"University Malaya Medical Centre","ror":"https://ror.org/00vkrxq08","country_code":"MY","type":"healthcare","lineage":["https://openalex.org/I1296788130"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Lai Meng Looi","raw_affiliation_strings":["University Malaya Medical Center,Department of Pathology,Kuala Lumpur,Malaysia","Department of Pathology, University Malaya Medical Center, Kuala Lumpur, Malaysia"],"affiliations":[{"raw_affiliation_string":"University Malaya Medical Center,Department of Pathology,Kuala Lumpur,Malaysia","institution_ids":["https://openalex.org/I1296788130"]},{"raw_affiliation_string":"Department of Pathology, University Malaya Medical Center, Kuala Lumpur, Malaysia","institution_ids":["https://openalex.org/I1296788130"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107351315","display_name":"Phaik Leng Cheah","orcid":null},"institutions":[{"id":"https://openalex.org/I1296788130","display_name":"University Malaya Medical Centre","ror":"https://ror.org/00vkrxq08","country_code":"MY","type":"healthcare","lineage":["https://openalex.org/I1296788130"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Phaik Leng Cheah","raw_affiliation_strings":["University Malaya Medical Center,Department of Pathology,Kuala Lumpur,Malaysia","Department of Pathology, University Malaya Medical Center, Kuala Lumpur, Malaysia"],"affiliations":[{"raw_affiliation_string":"University Malaya Medical Center,Department of Pathology,Kuala Lumpur,Malaysia","institution_ids":["https://openalex.org/I1296788130"]},{"raw_affiliation_string":"Department of Pathology, University Malaya Medical Center, Kuala Lumpur, Malaysia","institution_ids":["https://openalex.org/I1296788130"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013576396","display_name":"Yen Fa Toh","orcid":"https://orcid.org/0000-0002-4162-7884"},"institutions":[{"id":"https://openalex.org/I1296788130","display_name":"University Malaya Medical Centre","ror":"https://ror.org/00vkrxq08","country_code":"MY","type":"healthcare","lineage":["https://openalex.org/I1296788130"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Yen Fa Toh","raw_affiliation_strings":["University Malaya Medical Center,Department of Pathology,Kuala Lumpur,Malaysia","Department of Pathology, University Malaya Medical Center, Kuala Lumpur, Malaysia"],"affiliations":[{"raw_affiliation_string":"University Malaya Medical Center,Department of Pathology,Kuala Lumpur,Malaysia","institution_ids":["https://openalex.org/I1296788130"]},{"raw_affiliation_string":"Department of Pathology, University Malaya Medical Center, Kuala Lumpur, Malaysia","institution_ids":["https://openalex.org/I1296788130"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019400360","display_name":"Mohammad Faizal Ahmad Fauzi","orcid":"https://orcid.org/0000-0001-5382-6269"},"institutions":[{"id":"https://openalex.org/I173029219","display_name":"Multimedia University","ror":"https://ror.org/04zrbnc33","country_code":"MY","type":"education","lineage":["https://openalex.org/I173029219"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Mohammad Faizal Ahmad Fauzi","raw_affiliation_strings":["Multimedia University,Faculty of Engineering,Cyberjaya,Malaysia","Faculty of Engineering, Multimedia University, Cyberjaya, Malaysia"],"affiliations":[{"raw_affiliation_string":"Multimedia University,Faculty of Engineering,Cyberjaya,Malaysia","institution_ids":["https://openalex.org/I173029219"]},{"raw_affiliation_string":"Faculty of Engineering, Multimedia University, Cyberjaya, Malaysia","institution_ids":["https://openalex.org/I173029219"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5059926621"],"corresponding_institution_ids":["https://openalex.org/I173029219"],"apc_list":null,"apc_paid":null,"fwci":0.5231,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.71954092,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"2500","last_page":"2504"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10755","display_name":"HER2/EGFR in Cancer Research","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6820885539054871},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6706377267837524},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.6659682989120483},{"id":"https://openalex.org/keywords/transformer","display_name":"Transformer","score":0.6605024337768555},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.6329537630081177},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5653165578842163},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.513892412185669},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.43120452761650085},{"id":"https://openalex.org/keywords/speech-recognition","display_name":"Speech recognition","score":0.3310527801513672},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3235473036766052},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.0936596691608429}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6820885539054871},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6706377267837524},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.6659682989120483},{"id":"https://openalex.org/C66322947","wikidata":"https://www.wikidata.org/wiki/Q11658","display_name":"Transformer","level":3,"score":0.6605024337768555},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.6329537630081177},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5653165578842163},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.513892412185669},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.43120452761650085},{"id":"https://openalex.org/C28490314","wikidata":"https://www.wikidata.org/wiki/Q189436","display_name":"Speech recognition","level":1,"score":0.3310527801513672},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3235473036766052},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0936596691608429},{"id":"https://openalex.org/C165801399","wikidata":"https://www.wikidata.org/wiki/Q25428","display_name":"Voltage","level":2,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/icip49359.2023.10222930","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/icip49359.2023.10222930","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE International Conference on Image Processing (ICIP)","raw_type":"proceedings-article"},{"id":"pmh:oai:shdl.mmu.edu.my:12129","is_oa":false,"landing_page_url":"http://shdl.mmu.edu.my/12129/","pdf_url":null,"source":{"id":"https://openalex.org/S4377196753","display_name":"Siti Hasmah Digital Library-MMU Institutiona Repository (Multimedia University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I173029219","host_organization_name":"Multimedia University","host_organization_lineage":["https://openalex.org/I173029219"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference or Workshop Item"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.49000000953674316,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320311649","display_name":"Ministry of Education","ror":"https://ror.org/036nq5137"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1772131958","https://openalex.org/W2130900820","https://openalex.org/W2141393790","https://openalex.org/W2163167967","https://openalex.org/W2951594447","https://openalex.org/W2963446712","https://openalex.org/W3130891966","https://openalex.org/W4297775537","https://openalex.org/W4298005544","https://openalex.org/W4311401918","https://openalex.org/W4312069245","https://openalex.org/W4361829736","https://openalex.org/W6737664043","https://openalex.org/W6784333009","https://openalex.org/W6788135285"],"related_works":["https://openalex.org/W4293226380","https://openalex.org/W4375867731","https://openalex.org/W2397288865","https://openalex.org/W2611989081","https://openalex.org/W4226493464","https://openalex.org/W4312417841","https://openalex.org/W3133861977","https://openalex.org/W2951211570","https://openalex.org/W3103566983","https://openalex.org/W3029198973"],"abstract_inverted_index":{"The":[0],"status":[1],"of":[2,21,32,150],"the":[3,19,30,57,67,98,126,132,142],"human":[4],"epidermal":[5],"growth":[6],"factor":[7],"receptor":[8],"2":[9],"(HER2)":[10],"gene":[11],"amplification":[12,48],"is":[13,115],"an":[14],"important":[15],"marker":[16],"for":[17,24,55],"assessing":[18],"efficacy":[20],"clinical":[22],"treatments":[23],"breast":[25],"cancer.":[26],"This":[27],"article":[28],"discusses":[29],"application":[31],"deep":[33],"learning":[34],"to":[35,103,125,130],"classify":[36],"HER2-SISH":[37,158],"(silver-enhanced":[38],"in":[39,117,155],"situ":[40],"hybridization)":[41],"pathological":[42],"images":[43,128],"and":[44,73,75,81,100],"identifies":[45],"their":[46,105],"HER2/Chr17":[47],"status.":[49],"We":[50],"used":[51,116],"four":[52],"pre-trained":[53],"models":[54,65,78,95],"classifying":[56],"cases":[58],"into":[59],"either":[60],"amplified":[61,157],"or":[62],"non-amplified:":[63],"two":[64,76,93],"from":[66,86,111],"convolutional":[68],"neural":[69],"networks,":[70],"CNNs":[71],"(DenseNet,":[72],"MobileNet),":[74],"transformer":[77,99],"(Vision":[79],"Transformer,":[80],"Data-Efficient":[82],"Image":[83],"Transformers).":[84],"Apart":[85],"these":[87],"single":[88],"models,":[89],"we":[90],"also":[91],"built":[92],"ensemble":[94],"by":[96],"concatenating":[97],"CNN":[101],"architectures":[102],"observe":[104],"performances.":[106],"A":[107],"private":[108],"dataset":[109],"obtained":[110],"our":[112],"collaborating":[113],"hospital":[114],"this":[118],"project,":[119],"with":[120,138,146,152],"several":[121],"preprocessing":[122],"techniques":[123],"applied":[124],"raw":[127],"prior":[129],"feeding":[131],"models.":[133],"Promising":[134],"results":[135],"are":[136],"reported":[137],"ViT":[139],"emerged":[140],"as":[141],"best":[143],"performing":[144],"model":[145],"a":[147],"high":[148],"accuracy":[149],"87.48%,":[151],"92.93%":[153],"recall":[154],"detecting":[156],"samples.":[159]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2}],"updated_date":"2026-03-25T13:04:00.132906","created_date":"2025-10-10T00:00:00"}
