{"id":"https://openalex.org/W2890199721","doi":"https://doi.org/10.1109/icip.2018.8451724","title":"An Innovative 3D Adaptive Patient-Related Atlas for Automatic Segmentation of Retina Layers from Oct Images","display_name":"An Innovative 3D Adaptive Patient-Related Atlas for Automatic Segmentation of Retina Layers from Oct Images","publication_year":2018,"publication_date":"2018-09-07","ids":{"openalex":"https://openalex.org/W2890199721","doi":"https://doi.org/10.1109/icip.2018.8451724","mag":"2890199721"},"language":"en","primary_location":{"id":"doi:10.1109/icip.2018.8451724","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icip.2018.8451724","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 25th IEEE International Conference on Image Processing (ICIP)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067704900","display_name":"Ahmed A. Sleman","orcid":null},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ahmed A. Sleman","raw_affiliation_strings":["Computer Science and Computer Engineering Department, University of Louisville, KY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science and Computer Engineering Department, University of Louisville, KY, USA","institution_ids":["https://openalex.org/I142740786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025586638","display_name":"Ahmed ElTanboly","orcid":"https://orcid.org/0000-0002-7675-3848"},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ahmed Eltanboly","raw_affiliation_strings":["Bioengineering Department, University of Louisville, KY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering Department, University of Louisville, KY, USA","institution_ids":["https://openalex.org/I142740786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013054530","display_name":"Ahmed Soliman","orcid":"https://orcid.org/0000-0002-1931-3416"},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ahmed Soliman","raw_affiliation_strings":["Bioengineering Department, University of Louisville, KY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering Department, University of Louisville, KY, USA","institution_ids":["https://openalex.org/I142740786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020634024","display_name":"Mohammed Ghazal","orcid":"https://orcid.org/0000-0002-9045-6698"},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mohammed Ghazal","raw_affiliation_strings":["Bioengineering Department, University of Louisville, KY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering Department, University of Louisville, KY, USA","institution_ids":["https://openalex.org/I142740786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028075433","display_name":"Harpal S. Sandhu","orcid":"https://orcid.org/0000-0002-5500-8910"},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Harpal Sandhu","raw_affiliation_strings":["Department of Ophthalmology, University of Louisville, KY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ophthalmology, University of Louisville, KY, USA","institution_ids":["https://openalex.org/I142740786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041574948","display_name":"Shlomit Schaal","orcid":"https://orcid.org/0000-0002-0002-0445"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shlomit Schaal","raw_affiliation_strings":["Ophthalmology and Visual Sciences Department, Medical School, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ophthalmology and Visual Sciences Department, Medical School, MA, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043602973","display_name":"Robert Keynton","orcid":"https://orcid.org/0000-0001-5581-0500"},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Keynton","raw_affiliation_strings":["Bioengineering Department, University of Louisville, KY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering Department, University of Louisville, KY, USA","institution_ids":["https://openalex.org/I142740786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045337673","display_name":"Adel Elmaghraby","orcid":"https://orcid.org/0000-0001-5274-8596"},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Adel Elmaghraby","raw_affiliation_strings":["Computer Science and Computer Engineering Department, University of Louisville, KY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science and Computer Engineering Department, University of Louisville, KY, USA","institution_ids":["https://openalex.org/I142740786"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075057705","display_name":"Ayman El\u2010Baz","orcid":"https://orcid.org/0000-0001-7264-1323"},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ayman El-Baz","raw_affiliation_strings":["Bioengineering Department, University of Louisville, KY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering Department, University of Louisville, KY, USA","institution_ids":["https://openalex.org/I142740786"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.5553,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.70065304,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":95},"biblio":{"volume":"1559","issue":null,"first_page":"729","last_page":"733"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12549","display_name":"Image and Object Detection Techniques","score":0.9837999939918518,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/retina","display_name":"Retina","score":0.7538881897926331},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.7140775322914124},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.709621787071228},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6839637160301208},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6803194880485535},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6593276262283325},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5469512939453125},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.34757885336875916},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.1494792401790619},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.14051777124404907},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.10894817113876343},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.08065420389175415}],"concepts":[{"id":"https://openalex.org/C2777093970","wikidata":"https://www.wikidata.org/wiki/Q169342","display_name":"Retina","level":2,"score":0.7538881897926331},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.7140775322914124},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.709621787071228},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6839637160301208},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6803194880485535},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6593276262283325},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5469512939453125},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.34757885336875916},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.1494792401790619},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.14051777124404907},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.10894817113876343},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.08065420389175415}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/icip.2018.8451724","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icip.2018.8451724","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 25th IEEE International Conference on Image Processing (ICIP)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W1564494933","https://openalex.org/W1603593764","https://openalex.org/W1873693865","https://openalex.org/W1972829195","https://openalex.org/W1985690171","https://openalex.org/W2002643655","https://openalex.org/W2013107002","https://openalex.org/W2024492357","https://openalex.org/W2033494742","https://openalex.org/W2066572511","https://openalex.org/W2100546771","https://openalex.org/W2127318120","https://openalex.org/W2143268474","https://openalex.org/W2163821940","https://openalex.org/W2164774194","https://openalex.org/W2183067223","https://openalex.org/W2342801317","https://openalex.org/W2418802570","https://openalex.org/W2511703975","https://openalex.org/W2520732917","https://openalex.org/W2523513766","https://openalex.org/W2560465672","https://openalex.org/W2564861555","https://openalex.org/W2567707471","https://openalex.org/W2758294756","https://openalex.org/W2807650948","https://openalex.org/W2992561681","https://openalex.org/W6684134572","https://openalex.org/W6744244341"],"related_works":["https://openalex.org/W2314146950","https://openalex.org/W2011187995","https://openalex.org/W2373521488","https://openalex.org/W2324878645","https://openalex.org/W2803101231","https://openalex.org/W4284509","https://openalex.org/W4393084406","https://openalex.org/W606911313","https://openalex.org/W4229506690","https://openalex.org/W1522196789"],"abstract_inverted_index":{"This":[0],"paper":[1],"introduces":[2],"a":[3,90,186,236],"3D":[4,18,29,161,238],"segmentation":[5,54,221,230,240],"approach":[6,168,222,231,241],"using":[7,66,89,202],"an":[8,14],"adaptive":[9],"patient-specific":[10,30],"retinal":[11,31,81],"atlas":[12],"and":[13,76,115,143,182,190,211,232],"appearance":[15,114],"model":[16,121],"for":[17],"Optical":[19],"Coherence":[20],"Tomography":[21],"(OCT)":[22],"data.":[23],"In":[24],"order":[25,113,117],"to":[26,50,110,125,148],"reconstruct":[27],"the":[28,37,42,48,61,111,123,129,132,150,159,191,203,220,225,228],"atlas,":[32],"we":[33],"started":[34],"by":[35,65,196,219],"segmenting":[36],"macula":[38,133],"central":[39],"area":[40,59],"where":[41],"fovea":[43],"is":[44,63],"clearly":[45,223],"identified":[46],"in":[47,243],"data":[49,124],"be":[51,126],"segmented.":[52,127,165],"The":[53,104,153,166,216],"of":[55,79,92,122,131,227],"this":[56],"selected":[57],"foveal":[58],"inside":[60],"retina":[62,197],"accomplished":[64],"joint":[67],"Markov":[68],"Gibbs":[69],"Random":[70],"Field":[71],"(MGRF)":[72],"integrating":[73],"shape,":[74],"intensity,":[75],"spatial":[77,118],"information":[78],"12":[80],"layers.":[82],"A":[83],"2D":[84],"shape":[85,105],"prior":[86,106],"was":[87,107,156,164,169,200],"built":[88],"series":[91],"co-registered":[93],"training":[94],"OCT":[95,162,180,239],"images":[96],"that":[97],"were":[98,146,193],"collected":[99],"from":[100],"200":[101],"different":[102,173],"subjects.":[103],"then":[108,183,194],"adapted":[109],"first":[112],"second":[116],"interaction":[119],"MGRF":[120],"Once":[128],"middle":[130],"\u201cfoveal":[134],"area\u201d":[135],"had":[136],"been":[137],"segmented,":[138],"its":[139],"segmented":[140],"layers'":[141],"labels":[142],"their":[144],"appearances":[145],"used":[147],"segment":[149],"adjacent":[151],"slices.":[152],"previous":[154],"step":[155],"propagated":[157],"until":[158],"complete":[160],"patient-data":[163],"proposed":[167,229],"tested":[170],"on":[171],"30":[172],"subjects,":[174],"with":[175,185],"either":[176],"normal":[177],"or":[178],"pathological":[179],"scans,":[181],"compared":[184],"delineated":[187],"ground":[188],"truth":[189],"results":[192],"verified":[195],"specialists.":[198],"Performance":[199],"measured":[201],"Dice":[204],"Similarity":[205],"Coefficient":[206],"(DSC),":[207],"agreement":[208],"coefficient":[209],"(AC),":[210],"average":[212],"deviation":[213],"(AD)":[214],"metrics.":[215],"accuracy":[217],"achieved":[218],"demonstrates":[224],"promise":[226],"shows":[233],"improvement":[234],"over":[235],"state-of-the-art":[237],"currently":[242],"use.":[244]},"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
