{"id":"https://openalex.org/W2606959331","doi":"https://doi.org/10.1109/icin.2017.7899403","title":"Designing and deploying a bioinformatics software-defined network exchange (SDX): Architecture, services, capabilities, and foundation technologies","display_name":"Designing and deploying a bioinformatics software-defined network exchange (SDX): Architecture, services, capabilities, and foundation technologies","publication_year":2017,"publication_date":"2017-03-01","ids":{"openalex":"https://openalex.org/W2606959331","doi":"https://doi.org/10.1109/icin.2017.7899403","mag":"2606959331"},"language":"en","primary_location":{"id":"doi:10.1109/icin.2017.7899403","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icin.2017.7899403","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 20th Conference on Innovations in Clouds, Internet and Networks (ICIN)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034110297","display_name":"Joe Mambretti","orcid":"https://orcid.org/0000-0001-8800-6121"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Joe Mambretti","raw_affiliation_strings":["International Center for Advanced Internet Research, Northwestern University, Chicago, Illinois, USA"],"affiliations":[{"raw_affiliation_string":"International Center for Advanced Internet Research, Northwestern University, Chicago, Illinois, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028963231","display_name":"Jim Chen","orcid":"https://orcid.org/0000-0002-3255-9656"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jim Chen","raw_affiliation_strings":["International Center for Advanced Internet Research, Northwestern University, Chicago, Illinois, USA"],"affiliations":[{"raw_affiliation_string":"International Center for Advanced Internet Research, Northwestern University, Chicago, Illinois, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109266899","display_name":"Fei Yeh","orcid":null},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fei Yeh","raw_affiliation_strings":["International Center for Advanced Internet Research, Northwestern University, Chicago, Illinois, USA"],"affiliations":[{"raw_affiliation_string":"International Center for Advanced Internet Research, Northwestern University, Chicago, Illinois, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050853661","display_name":"Robert L. Grossman","orcid":"https://orcid.org/0000-0003-3741-5739"},"institutions":[{"id":"https://openalex.org/I40347166","display_name":"University of Chicago","ror":"https://ror.org/024mw5h28","country_code":"US","type":"education","lineage":["https://openalex.org/I40347166"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Grossman","raw_affiliation_strings":["Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA"],"affiliations":[{"raw_affiliation_string":"Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA","institution_ids":["https://openalex.org/I40347166"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113968260","display_name":"Piers Nash","orcid":null},"institutions":[{"id":"https://openalex.org/I40347166","display_name":"University of Chicago","ror":"https://ror.org/024mw5h28","country_code":"US","type":"education","lineage":["https://openalex.org/I40347166"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Piers Nash","raw_affiliation_strings":["Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA"],"affiliations":[{"raw_affiliation_string":"Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA","institution_ids":["https://openalex.org/I40347166"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031720166","display_name":"Alison Heath","orcid":null},"institutions":[{"id":"https://openalex.org/I40347166","display_name":"University of Chicago","ror":"https://ror.org/024mw5h28","country_code":"US","type":"education","lineage":["https://openalex.org/I40347166"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alison Heath","raw_affiliation_strings":["Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA"],"affiliations":[{"raw_affiliation_string":"Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA","institution_ids":["https://openalex.org/I40347166"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113933526","display_name":"Renuka Arya","orcid":null},"institutions":[{"id":"https://openalex.org/I40347166","display_name":"University of Chicago","ror":"https://ror.org/024mw5h28","country_code":"US","type":"education","lineage":["https://openalex.org/I40347166"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Renuka Arya","raw_affiliation_strings":["Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA"],"affiliations":[{"raw_affiliation_string":"Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA","institution_ids":["https://openalex.org/I40347166"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062234997","display_name":"Stuti Agrawal","orcid":"https://orcid.org/0000-0002-2999-2192"},"institutions":[{"id":"https://openalex.org/I40347166","display_name":"University of Chicago","ror":"https://ror.org/024mw5h28","country_code":"US","type":"education","lineage":["https://openalex.org/I40347166"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stuti Agrawal","raw_affiliation_strings":["Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA"],"affiliations":[{"raw_affiliation_string":"Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA","institution_ids":["https://openalex.org/I40347166"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100389502","display_name":"Zhenyu Zhang","orcid":"https://orcid.org/0000-0001-6655-053X"},"institutions":[{"id":"https://openalex.org/I40347166","display_name":"University of Chicago","ror":"https://ror.org/024mw5h28","country_code":"US","type":"education","lineage":["https://openalex.org/I40347166"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhenyu Zhang","raw_affiliation_strings":["Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA"],"affiliations":[{"raw_affiliation_string":"Center for Data Intensive Science, University of Chicago, Chicago, Illinois, USA","institution_ids":["https://openalex.org/I40347166"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5034110297"],"corresponding_institution_ids":["https://openalex.org/I111979921"],"apc_list":null,"apc_paid":null,"fwci":0.4144,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.63991255,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"14","issue":null,"first_page":"135","last_page":"142"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10714","display_name":"Software-Defined Networks and 5G","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10714","display_name":"Software-Defined Networks and 5G","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11932","display_name":"Wireless Body Area Networks","score":0.9435999989509583,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11478","display_name":"Caching and Content Delivery","score":0.9412000179290771,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7502855658531189},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.684177041053772},{"id":"https://openalex.org/keywords/virtualization","display_name":"Virtualization","score":0.5989214777946472},{"id":"https://openalex.org/keywords/software-defined-networking","display_name":"Software-defined networking","score":0.4658990800380707},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.461661159992218},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4437943994998932},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.419898122549057},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3751145601272583},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.26916348934173584},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.1797424852848053},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1615789830684662}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7502855658531189},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.684177041053772},{"id":"https://openalex.org/C513985346","wikidata":"https://www.wikidata.org/wiki/Q270471","display_name":"Virtualization","level":3,"score":0.5989214777946472},{"id":"https://openalex.org/C77270119","wikidata":"https://www.wikidata.org/wiki/Q1655198","display_name":"Software-defined networking","level":2,"score":0.4658990800380707},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.461661159992218},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4437943994998932},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.419898122549057},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3751145601272583},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.26916348934173584},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.1797424852848053},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1615789830684662}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/icin.2017.7899403","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icin.2017.7899403","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 20th Conference on Innovations in Clouds, Internet and Networks (ICIN)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6399999856948853,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320309475","display_name":"Northwestern University","ror":"https://ror.org/000e0be47"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W597899167","https://openalex.org/W1584646283","https://openalex.org/W1973762965","https://openalex.org/W1975303279","https://openalex.org/W1987598113","https://openalex.org/W2004822338","https://openalex.org/W2006270836","https://openalex.org/W2018666937","https://openalex.org/W2044848698","https://openalex.org/W2050365740","https://openalex.org/W2067489077","https://openalex.org/W2080361005","https://openalex.org/W2099330361","https://openalex.org/W2122425433","https://openalex.org/W2147118406","https://openalex.org/W2148790965","https://openalex.org/W2150574682","https://openalex.org/W2154608739","https://openalex.org/W2186961980","https://openalex.org/W2255382812","https://openalex.org/W2336067426","https://openalex.org/W2414614652","https://openalex.org/W2508431599","https://openalex.org/W2538837735","https://openalex.org/W6651352055","https://openalex.org/W6651783326","https://openalex.org/W6686885839","https://openalex.org/W6692139977","https://openalex.org/W6716008111"],"related_works":["https://openalex.org/W4244478748","https://openalex.org/W4223488648","https://openalex.org/W2134969820","https://openalex.org/W2251605416","https://openalex.org/W1997222214","https://openalex.org/W2560439919","https://openalex.org/W4389340727","https://openalex.org/W3150465815","https://openalex.org/W2802581102","https://openalex.org/W4205786897"],"abstract_inverted_index":{"This":[0,34],"paper":[1],"describes":[2],"a":[3,20],"Bioinformatics":[4],"Software":[5],"Defined":[6],"Network":[7],"Exchange":[8],"(SDX)":[9],"or":[10],"BioSDX,":[11],"which":[12],"has":[13],"been":[14],"designed,":[15],"deployed,":[16],"and":[17,60,102],"demonstrated":[18],"by":[19,30],"multi-organizational":[21],"research":[22],"consortium":[23],"to":[24,39],"enable":[25],"bioinformatics":[26,95],"knowledge":[27],"discovery":[28],"supported":[29],"dynamic":[31],"networking":[32,38],"services.":[33],"BioSDX":[35,44,82],"uses":[36],"precision":[37,41,103],"support":[40],"medicine.":[42,104],"The":[43],"is":[45,83],"based":[46],"on":[47],"recent":[48],"technical":[49],"developments":[50],"in":[51,87],"infrastructure":[52,65],"abstraction":[53],"that":[54],"enables":[55],"new":[56,90],"types":[57],"of":[58,69,76,92],"tools":[59],"services":[61],"utilizing":[62],"programmable":[63,77],"network":[64],"through":[66],"high":[67],"levels":[68],"resource":[70],"virtualization.":[71],"Combined":[72],"with":[73],"close":[74],"integration":[75],"cloud":[78],"computing":[79],"facilities,":[80],"the":[81,89],"an":[84],"important":[85],"advance":[86],"supporting":[88],"paradigm":[91],"data":[93],"intensive":[94],"across":[96],"multiple":[97],"disciplines,":[98],"including":[99],"computational":[100],"genomics":[101]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
