{"id":"https://openalex.org/W2982406106","doi":"https://doi.org/10.1109/iceee.2019.8884558","title":"Comparison between CNA Estimators and WGS technology based on the Refinement of Breakpoints using the Confidence Masks","display_name":"Comparison between CNA Estimators and WGS technology based on the Refinement of Breakpoints using the Confidence Masks","publication_year":2019,"publication_date":"2019-09-01","ids":{"openalex":"https://openalex.org/W2982406106","doi":"https://doi.org/10.1109/iceee.2019.8884558","mag":"2982406106"},"language":"en","primary_location":{"id":"doi:10.1109/iceee.2019.8884558","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iceee.2019.8884558","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 16th International Conference on Electrical Engineering, Computing Science and Automatic Control (CCE)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037857085","display_name":"Jorge Mu\u00f1oz\u2010Minjares","orcid":"https://orcid.org/0000-0001-8097-9551"},"institutions":[{"id":"https://openalex.org/I96523616","display_name":"Technological University of Mexico","ror":"https://ror.org/01687hb54","country_code":"MX","type":"education","lineage":["https://openalex.org/I193484058","https://openalex.org/I96523616"]}],"countries":["MX"],"is_corresponding":true,"raw_author_name":"Jorge Munoz-Minjares","raw_affiliation_strings":["Department of Eng. in Productive Systems, Universidad Tencnologica de Salamanca, Salamanca, Mexico"],"affiliations":[{"raw_affiliation_string":"Department of Eng. in Productive Systems, Universidad Tencnologica de Salamanca, Salamanca, Mexico","institution_ids":["https://openalex.org/I96523616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058205797","display_name":"Yuriy S. Shmaliy","orcid":"https://orcid.org/0000-0001-6848-453X"},"institutions":[{"id":"https://openalex.org/I129858807","display_name":"Universidad de Guanajuato","ror":"https://ror.org/058cjye32","country_code":"MX","type":"education","lineage":["https://openalex.org/I129858807"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Yuriy S. Shmaliy","raw_affiliation_strings":["Department of Electronics Engineering, Universidad de Guanajuato, Salamanca, Mexico"],"affiliations":[{"raw_affiliation_string":"Department of Electronics Engineering, Universidad de Guanajuato, Salamanca, Mexico","institution_ids":["https://openalex.org/I129858807"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101522104","display_name":"Tatiana Popova","orcid":"https://orcid.org/0000-0002-6570-8064"},"institutions":[{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"funder","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Tatiana G. Popova","raw_affiliation_strings":["Department of UNITE 830, Institute Curie, Paris, France"],"affiliations":[{"raw_affiliation_string":"Department of UNITE 830, Institute Curie, Paris, France","institution_ids":["https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048997691","display_name":"Janette Perez-Chimal","orcid":null},"institutions":[{"id":"https://openalex.org/I96523616","display_name":"Technological University of Mexico","ror":"https://ror.org/01687hb54","country_code":"MX","type":"education","lineage":["https://openalex.org/I193484058","https://openalex.org/I96523616"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Janette Perez-Chimal","raw_affiliation_strings":["Department of Mechatronics, Universidad Tecnologica de Salamanca, Salamanca, Mexico"],"affiliations":[{"raw_affiliation_string":"Department of Mechatronics, Universidad Tecnologica de Salamanca, Salamanca, Mexico","institution_ids":["https://openalex.org/I96523616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000515854","display_name":"Jose Lopez-Robles","orcid":null},"institutions":[{"id":"https://openalex.org/I96523616","display_name":"Technological University of Mexico","ror":"https://ror.org/01687hb54","country_code":"MX","type":"education","lineage":["https://openalex.org/I193484058","https://openalex.org/I96523616"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Jose Lopez-Robles","raw_affiliation_strings":["Department of Eng. in Productive Systems, Universidad Tencnologica de Salamanca, Salamanca, Mexico"],"affiliations":[{"raw_affiliation_string":"Department of Eng. in Productive Systems, Universidad Tencnologica de Salamanca, Salamanca, Mexico","institution_ids":["https://openalex.org/I96523616"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055559079","display_name":"Misael Lopez\u2013Ramirez","orcid":"https://orcid.org/0000-0003-0801-029X"},"institutions":[{"id":"https://openalex.org/I4400573279","display_name":"Instituto Tecnol\u00f3gico de Aguascalientes","ror":"https://ror.org/03qvpys73","country_code":null,"type":"education","lineage":["https://openalex.org/I4400573279"]},{"id":"https://openalex.org/I4210145680","display_name":"Universidad Tecnol\u00f3gica de Aguascalientes","ror":"https://ror.org/0426xa281","country_code":"MX","type":"education","lineage":["https://openalex.org/I4210145680"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Misael Lopez-Ramirez","raw_affiliation_strings":["Department of Electronics Engineering, Instituto Tecnologico de Aguascalientes, Aguascalientes, Mexico"],"affiliations":[{"raw_affiliation_string":"Department of Electronics Engineering, Instituto Tecnologico de Aguascalientes, Aguascalientes, Mexico","institution_ids":["https://openalex.org/I4210145680","https://openalex.org/I4400573279"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5037857085"],"corresponding_institution_ids":["https://openalex.org/I96523616"],"apc_list":null,"apc_paid":null,"fwci":0.1786,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.64287538,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":93},"biblio":{"volume":"31","issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/estimator","display_name":"Estimator","score":0.7610529065132141},{"id":"https://openalex.org/keywords/breakpoint","display_name":"Breakpoint","score":0.7168099880218506},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5916361212730408},{"id":"https://openalex.org/keywords/statistic","display_name":"Statistic","score":0.49078330397605896},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.45670080184936523},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.3834289014339447},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34352388978004456},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3233358860015869},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.293907105922699},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.28553926944732666},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19796982407569885},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.11139872670173645},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10354200005531311}],"concepts":[{"id":"https://openalex.org/C185429906","wikidata":"https://www.wikidata.org/wiki/Q1130160","display_name":"Estimator","level":2,"score":0.7610529065132141},{"id":"https://openalex.org/C206936463","wikidata":"https://www.wikidata.org/wiki/Q634179","display_name":"Breakpoint","level":4,"score":0.7168099880218506},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5916361212730408},{"id":"https://openalex.org/C89128539","wikidata":"https://www.wikidata.org/wiki/Q1949963","display_name":"Statistic","level":2,"score":0.49078330397605896},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.45670080184936523},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.3834289014339447},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34352388978004456},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3233358860015869},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.293907105922699},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.28553926944732666},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19796982407569885},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.11139872670173645},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10354200005531311},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/iceee.2019.8884558","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iceee.2019.8884558","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 16th International Conference on Electrical Engineering, Computing Science and Automatic Control (CCE)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.6700000166893005,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W220770808","https://openalex.org/W748361478","https://openalex.org/W1975684011","https://openalex.org/W1997841190","https://openalex.org/W2005236430","https://openalex.org/W2021920872","https://openalex.org/W2073225422","https://openalex.org/W2117882593","https://openalex.org/W2121743948","https://openalex.org/W2133174470","https://openalex.org/W2152575748","https://openalex.org/W2157825442","https://openalex.org/W2158698691","https://openalex.org/W2166481425","https://openalex.org/W2513799316","https://openalex.org/W2588804631","https://openalex.org/W2617530335","https://openalex.org/W2770334133","https://openalex.org/W2794635669","https://openalex.org/W4255375128","https://openalex.org/W6622066425","https://openalex.org/W7048018715"],"related_works":["https://openalex.org/W2036289360","https://openalex.org/W2003824598","https://openalex.org/W2606481030","https://openalex.org/W2123012074","https://openalex.org/W1979375946","https://openalex.org/W2117117412","https://openalex.org/W2102889349","https://openalex.org/W2067409815","https://openalex.org/W2034155503","https://openalex.org/W1975941837"],"abstract_inverted_index":{"Alterations":[0],"in":[1,81],"some":[2],"sections":[3],"of":[4,34,61,74,78,88,100,106,112,193],"genomes":[5],"are":[6,13,22,90,177],"commonly":[7],"related":[8],"with":[9,63,179],"genetic":[10],"disorders,":[11],"which":[12],"well":[14],"known":[15,25],"as":[16,26],"Structural":[17],"Aberrations":[18],"(SAs).":[19],"The":[20],"SAs":[21],"usually":[23],"best":[24,135,216],"Copy":[27],"Number":[28],"Alteration":[29],"(CNA),":[30],"and":[31,43,58,102,128,166,209],"the":[32,56,64,68,85,103,107,110,113,125,134,144,156,164,174,184,191,199,215],"identifications":[33],"this":[35,138],"aberrations":[36],"is":[37,115,122,130,196],"essential":[38],"to":[39,44,54,124,132,142,154,213],"diagnose":[40],"a":[41,170,180],"diseases":[42],"provide":[45],"an":[46,97],"specific":[47,171],"treatment.":[48],"Many":[49],"algorithms":[50,168],"have":[51],"been":[52],"developed":[53],"estimate":[55],"breakpoints":[57,86,157,176],"segmental":[59],"levels":[60],"CNAs":[62,89,114],"minimum":[65],"error":[66],"using":[67,163],"data":[69],"obtained":[70,182],"by":[71,93,183,198],"modern":[72],"technologies":[73],"hybridization.":[75],"In":[76,137],"spite":[77],"recent":[79],"advances":[80],"high":[82],"resolution":[83],"data,":[84],"estimated":[87,158],"regularly":[91],"inconsistent":[92],"two":[94],"principal":[95],"causes:":[96],"extensive":[98],"variability":[99],"measurements":[101],"different":[104],"designs":[105],"algorithms.":[108],"Although":[109],"estimation":[111,126],"extremely":[116],"important,":[117],"still":[118],"much":[119],"less":[120],"attention":[121],"given":[123],"accuracy":[127],"it":[129],"difficult":[131],"select":[133],"estimator.":[136],"work,":[139],"we":[140],"propose":[141],"use":[143],"confidence":[145],"masks":[146],"based":[147],"on":[148],"asymmetric":[149],"exponential":[150],"power":[151],"distribution":[152],"(AEP)":[153],"remove":[155],"from":[159],"Ovarian":[160],"Cancer":[161],"samples":[162],"CBS":[165],"PELT":[167],"at":[169],"probability.":[172],"Next,":[173],"refined":[175],"compared":[178],"reference":[181],"Whole":[185],"Genome":[186],"Sequencing":[187],"(WGS)":[188],"technology.":[189],"Finally,":[190],"effectiveness":[192],"each":[194],"estimator":[195],"registered":[197],"F":[200],"<sub":[201],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[202],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">1</sub>":[203],"test,":[204],"Area":[205],"Under":[206],"Curve":[207],"(AUC)":[208],"Youden's":[210],"J":[211],"statistic":[212],"determine":[214],"algorithm.":[217]},"counts_by_year":[{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
