{"id":"https://openalex.org/W2153184876","doi":"https://doi.org/10.1109/icde.2004.1320039","title":"Unordered tree mining with applications to phylogeny","display_name":"Unordered tree mining with applications to phylogeny","publication_year":2004,"publication_date":"2004-09-28","ids":{"openalex":"https://openalex.org/W2153184876","doi":"https://doi.org/10.1109/icde.2004.1320039","mag":"2153184876"},"language":"en","primary_location":{"id":"doi:10.1109/icde.2004.1320039","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icde.2004.1320039","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. 20th International Conference on Data Engineering","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055576104","display_name":"Dennis Shasha","orcid":"https://orcid.org/0000-0002-7036-3312"},"institutions":[{"id":"https://openalex.org/I36672615","display_name":"Courant Institute of Mathematical Sciences","ror":"https://ror.org/037tm7f56","country_code":"US","type":"education","lineage":["https://openalex.org/I36672615","https://openalex.org/I57206974"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"D. Shasha","raw_affiliation_strings":["Courant Institute of Mathematical Sciences, New York University, New York, NY, USA"],"affiliations":[{"raw_affiliation_string":"Courant Institute of Mathematical Sciences, New York University, New York, NY, USA","institution_ids":["https://openalex.org/I36672615","https://openalex.org/I57206974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110106915","display_name":"J.T.L. Wang","orcid":"https://orcid.org/0009-0007-9928-980X"},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J.T.L. Wang","raw_affiliation_strings":["College of Computing Science, New Jersey Institute of Technology, Newark, NJ, USA"],"affiliations":[{"raw_affiliation_string":"College of Computing Science, New Jersey Institute of Technology, Newark, NJ, USA","institution_ids":["https://openalex.org/I118118575"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100378893","display_name":"Sen Zhang","orcid":"https://orcid.org/0000-0002-8010-6045"},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sen Zhang","raw_affiliation_strings":["College of Computing Science, New Jersey Institute of Technology, Newark, NJ, USA"],"affiliations":[{"raw_affiliation_string":"College of Computing Science, New Jersey Institute of Technology, Newark, NJ, USA","institution_ids":["https://openalex.org/I118118575"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5055576104"],"corresponding_institution_ids":["https://openalex.org/I36672615","https://openalex.org/I57206974"],"apc_list":null,"apc_paid":null,"fwci":13.727,"has_fulltext":false,"cited_by_count":65,"citation_normalized_percentile":{"value":0.98343913,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"708","last_page":"719"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12016","display_name":"Web Data Mining and Analysis","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6539746522903442},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.6157742142677307},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5316213965415955},{"id":"https://openalex.org/keywords/cousin","display_name":"Cousin","score":0.5193861126899719},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5019183158874512},{"id":"https://openalex.org/keywords/kernel","display_name":"Kernel (algebra)","score":0.41282233595848083},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.33864742517471313},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32819080352783203},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.24441039562225342},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.12242186069488525},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.07487562298774719}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6539746522903442},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.6157742142677307},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5316213965415955},{"id":"https://openalex.org/C2779879524","wikidata":"https://www.wikidata.org/wiki/Q23009870","display_name":"Cousin","level":2,"score":0.5193861126899719},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5019183158874512},{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.41282233595848083},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.33864742517471313},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32819080352783203},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.24441039562225342},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.12242186069488525},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.07487562298774719},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/icde.2004.1320039","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icde.2004.1320039","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. 20th International Conference on Data Engineering","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.66.4812","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.66.4812","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cis.njit.edu/~jason/publications/ARTICLES/icde04.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4399999976158142,"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":58,"referenced_works":["https://openalex.org/W202299441","https://openalex.org/W1535469659","https://openalex.org/W1553696291","https://openalex.org/W1557102886","https://openalex.org/W1641749581","https://openalex.org/W1967074821","https://openalex.org/W1971239730","https://openalex.org/W1979655691","https://openalex.org/W1995028654","https://openalex.org/W1996437477","https://openalex.org/W2002446259","https://openalex.org/W2004555680","https://openalex.org/W2009758120","https://openalex.org/W2011999472","https://openalex.org/W2030766291","https://openalex.org/W2040615703","https://openalex.org/W2049535977","https://openalex.org/W2050137450","https://openalex.org/W2055568252","https://openalex.org/W2069578775","https://openalex.org/W2089308938","https://openalex.org/W2092057784","https://openalex.org/W2094034674","https://openalex.org/W2100316327","https://openalex.org/W2102424972","https://openalex.org/W2102465628","https://openalex.org/W2108150886","https://openalex.org/W2112620675","https://openalex.org/W2120158609","https://openalex.org/W2124996875","https://openalex.org/W2128695242","https://openalex.org/W2129774983","https://openalex.org/W2135445920","https://openalex.org/W2136593687","https://openalex.org/W2137120608","https://openalex.org/W2156210689","https://openalex.org/W2156543375","https://openalex.org/W2158784529","https://openalex.org/W2159580106","https://openalex.org/W2160350701","https://openalex.org/W2163307056","https://openalex.org/W2163509192","https://openalex.org/W2163892779","https://openalex.org/W2400499165","https://openalex.org/W2522853541","https://openalex.org/W3199943451","https://openalex.org/W4231101924","https://openalex.org/W4236824548","https://openalex.org/W4254717640","https://openalex.org/W6608186361","https://openalex.org/W6632152498","https://openalex.org/W6633201405","https://openalex.org/W6633402183","https://openalex.org/W6675104676","https://openalex.org/W6679751352","https://openalex.org/W6680713955","https://openalex.org/W6773252166","https://openalex.org/W6800717233"],"related_works":["https://openalex.org/W2625844631","https://openalex.org/W2269191065","https://openalex.org/W2267108656","https://openalex.org/W2786298498","https://openalex.org/W3117360544","https://openalex.org/W2784608462","https://openalex.org/W2797860309","https://openalex.org/W628624614","https://openalex.org/W569989911","https://openalex.org/W2760989893"],"abstract_inverted_index":{"Frequent":[0],"structure":[1],"mining":[2],"(FSM)":[3],"aims":[4],"to":[5,131],"discover":[6],"and":[7,18,31,109,114,146],"extract":[8],"patterns":[9,42,49,134],"frequently":[10],"occurring":[11],"in":[12,24,43,55,91,102,135],"structural":[13],"data,":[14],"such":[15],"as":[16],"trees":[17,149],"graphs.":[19],"FSM":[20,38],"finds":[21,84],"many":[22],"applications":[23,130],"bioinformatics,":[25],"XML":[26],"processing,":[27],"Web":[28],"log":[29],"analysis,":[30],"so":[32],"on.":[33],"We":[34,154],"present":[35],"a":[36,62,79],"new":[37],"technique":[39],"for":[40,161],"finding":[41,147],"rooted":[44],"unordered":[45],"labeled":[46],"trees.":[47,57],"The":[48],"of":[50,64,89,100,116,124,142,150,152,158],"interest":[51],"are":[52],"cousin":[53,59,87],"pairs":[54,88],"these":[56],"A":[58],"pair":[60,63],"is":[61,97],"nodes":[65,101],"sharing":[66],"the":[67,70,74,98,112,117,122,140],"same":[68,71,75],"parent,":[69],"grandparent,":[72],"or":[73],"great-grandparent,":[76],"etc.":[77],"Given":[78],"tree":[80],"T,":[81],"our":[82,125,159],"algorithm":[83],"all":[85],"interesting":[86],"T":[90],"O(|T|/sup":[92],"2/)":[93],"time":[94],"where":[95],"|T|":[96],"number":[99],"T.":[103],"Experimental":[104],"results":[105],"on":[106],"synthetic":[107],"data":[108],"phylogenies":[110],"show":[111],"scalability":[113],"effectiveness":[115],"proposed":[118],"technique.":[119],"To":[120],"demonstrate":[121],"usefulness":[123],"approach,":[126],"we":[127],"discuss":[128],"its":[129],"locating":[132],"co-occurring":[133],"multiple":[136],"evolutionary":[137],"trees,":[138,145],"evaluating":[139],"consensus":[141],"equally":[143],"parsimonious":[144],"kernel":[148],"groups":[151],"phylogenies.":[153],"also":[155],"describe":[156],"extensions":[157],"algorithms":[160],"undirected":[162],"acyclic":[163],"graphs":[164],"(or":[165],"free":[166],"trees).":[167]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":7}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
