{"id":"https://openalex.org/W2020789523","doi":"https://doi.org/10.1109/iccabs.2014.6863927","title":"Constructing regulatory gene set networks to reveal novel insights into biological systems","display_name":"Constructing regulatory gene set networks to reveal novel insights into biological systems","publication_year":2014,"publication_date":"2014-06-01","ids":{"openalex":"https://openalex.org/W2020789523","doi":"https://doi.org/10.1109/iccabs.2014.6863927","mag":"2020789523"},"language":"en","primary_location":{"id":"doi:10.1109/iccabs.2014.6863927","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iccabs.2014.6863927","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001546652","display_name":"Chayaporn Suphavilai","orcid":"https://orcid.org/0000-0002-4777-4586"},"institutions":[{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chayaporn Suphavilai","raw_affiliation_strings":["Department of Computer & Information Science, Purdue University School of Science, Indianapolis, IN, USA","Discovery Informatics and Computing Laboratory, Indiana University, Indianapolis, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer & Information Science, Purdue University School of Science, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]},{"raw_affiliation_string":"Discovery Informatics and Computing Laboratory, Indiana University, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102148356","display_name":"Liugen Zhu","orcid":null},"institutions":[{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Liugen Zhu","raw_affiliation_strings":["Indiana University School of Informatics and Computing, Indianapolis, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indiana University School of Informatics and Computing, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I55769427"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058469124","display_name":"Jake Y. Chen","orcid":"https://orcid.org/0000-0001-8829-7504"},"institutions":[{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jake Y. Chen","raw_affiliation_strings":["Department of Computer & Information Science, Purdue University School of Science, Indianapolis, IN, USA","Discovery Informatics and Computing Laboratory, Indiana University, Indianapolis, IN, USA","Indiana University School of Informatics and Computing, Indianapolis, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer & Information Science, Purdue University School of Science, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]},{"raw_affiliation_string":"Discovery Informatics and Computing Laboratory, Indiana University, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I55769427"]},{"raw_affiliation_string":"Indiana University School of Informatics and Computing, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I55769427"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.761567234992981},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.7584012150764465},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5751618146896362},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.545598030090332},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5060390830039978},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.45115411281585693},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.41904884576797485},{"id":"https://openalex.org/keywords/set-theory","display_name":"Set theory","score":0.4106397330760956},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25021615624427795},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21337848901748657},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.17204561829566956}],"concepts":[{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.761567234992981},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.7584012150764465},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5751618146896362},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.545598030090332},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5060390830039978},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.45115411281585693},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.41904884576797485},{"id":"https://openalex.org/C153046414","wikidata":"https://www.wikidata.org/wiki/Q12482","display_name":"Set theory","level":3,"score":0.4106397330760956},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25021615624427795},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21337848901748657},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.17204561829566956},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/iccabs.2014.6863927","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iccabs.2014.6863927","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W2003031595","https://openalex.org/W2017079501","https://openalex.org/W2105325784","https://openalex.org/W2105924489","https://openalex.org/W2114830914","https://openalex.org/W2129605195","https://openalex.org/W2130410032","https://openalex.org/W2135329546","https://openalex.org/W2159482845","https://openalex.org/W2166898290","https://openalex.org/W2171322586","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2130939068","https://openalex.org/W3163717165","https://openalex.org/W2114466827","https://openalex.org/W249159571","https://openalex.org/W2791736663","https://openalex.org/W2010571965","https://openalex.org/W2806770614","https://openalex.org/W2129949791","https://openalex.org/W2131550814","https://openalex.org/W372882296"],"abstract_inverted_index":{"In":[0],"this":[1,23],"study,":[2],"we":[3],"proposed":[4],"an":[5],"approach":[6],"for":[7],"constructing":[8],"directed,":[9],"regulatory":[10,27],"gene":[11,19,28,39],"set":[12,29,40],"networks":[13,30,41],"to":[14,35],"reveal":[15],"novel":[16],"relationships":[17],"among":[18],"sets.":[20],"Results":[21],"from":[22],"study":[24],"showed":[25],"that":[26],"can":[31],"provide":[32],"complementary":[33],"information":[34],"existing":[36],"types":[37],"of":[38,46],"and":[42],"explain":[43],"underlying":[44],"mechanisms":[45],"a":[47],"disease.":[48]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
