{"id":"https://openalex.org/W2085325550","doi":"https://doi.org/10.1109/iccabs.2014.6863913","title":"A weighted classification model for peptide identification","display_name":"A weighted classification model for peptide identification","publication_year":2014,"publication_date":"2014-06-01","ids":{"openalex":"https://openalex.org/W2085325550","doi":"https://doi.org/10.1109/iccabs.2014.6863913","mag":"2085325550"},"language":"en","primary_location":{"id":"doi:10.1109/iccabs.2014.6863913","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iccabs.2014.6863913","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061941155","display_name":"Xijun Liang","orcid":"https://orcid.org/0000-0002-6991-7162"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xijun Liang","raw_affiliation_strings":["College of Science China University of Petroleum, Qingdao, China","College of Science, China University of Petroleum, Qingdao, China 266555"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Science China University of Petroleum, Qingdao, China","institution_ids":["https://openalex.org/I4210162190"]},{"raw_affiliation_string":"College of Science, China University of Petroleum, Qingdao, China 266555","institution_ids":["https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102767987","display_name":"Zhonghang Xia","orcid":"https://orcid.org/0000-0001-8934-7868"},"institutions":[{"id":"https://openalex.org/I94339441","display_name":"Western Kentucky University","ror":"https://ror.org/0446vnd56","country_code":"US","type":"education","lineage":["https://openalex.org/I94339441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhonghang Xia","raw_affiliation_strings":["Department of Computer Science, Western Kentucky University, Bowling Green, KY","Department of Computer Science, Western Kentucky University, Bowling Green, 42101, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Western Kentucky University, Bowling Green, KY","institution_ids":["https://openalex.org/I94339441"]},{"raw_affiliation_string":"Department of Computer Science, Western Kentucky University, Bowling Green, 42101, USA","institution_ids":["https://openalex.org/I94339441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012331541","display_name":"Xinnan Niu","orcid":null},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]},{"id":"https://openalex.org/I2802843175","display_name":"University School of Nashville","ror":"https://ror.org/05s409k40","country_code":"US","type":"education","lineage":["https://openalex.org/I2802843175"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xinnan Niu","raw_affiliation_strings":["Dept. of Pathology, Microbiology and Immunology, School of Medicine, Nashville, TN","Department of Pathology, Microbiology and Immunology, Vanderbilt University, School of Medicine, Nashville, TN, 37232, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Pathology, Microbiology and Immunology, School of Medicine, Nashville, TN","institution_ids":["https://openalex.org/I2802843175"]},{"raw_affiliation_string":"Department of Pathology, Microbiology and Immunology, Vanderbilt University, School of Medicine, Nashville, TN, 37232, USA","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055555857","display_name":"Andrew J. Link","orcid":"https://orcid.org/0000-0003-0885-5786"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]},{"id":"https://openalex.org/I2802843175","display_name":"University School of Nashville","ror":"https://ror.org/05s409k40","country_code":"US","type":"education","lineage":["https://openalex.org/I2802843175"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Link","raw_affiliation_strings":["Dept. of Pathology, Microbiology and Immunology, School of Medicine, Nashville, TN","Department of Pathology, Microbiology and Immunology, Vanderbilt University, School of Medicine, Nashville, TN, 37232, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Pathology, Microbiology and Immunology, School of Medicine, Nashville, TN","institution_ids":["https://openalex.org/I2802843175"]},{"raw_affiliation_string":"Department of Pathology, Microbiology and Immunology, Vanderbilt University, School of Medicine, Nashville, TN, 37232, USA","institution_ids":["https://openalex.org/I200719446"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.4835,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.6248641,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6251704096794128},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.607385516166687},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.566601037979126},{"id":"https://openalex.org/keywords/rank","display_name":"Rank (graph theory)","score":0.5502793192863464},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.538693368434906},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.48398685455322266},{"id":"https://openalex.org/keywords/search-engine","display_name":"Search engine","score":0.4539206027984619},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3391084671020508},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3349626064300537},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.32679030299186707},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1721184253692627},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.12624576687812805}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6251704096794128},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.607385516166687},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.566601037979126},{"id":"https://openalex.org/C164226766","wikidata":"https://www.wikidata.org/wiki/Q7293202","display_name":"Rank (graph theory)","level":2,"score":0.5502793192863464},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.538693368434906},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48398685455322266},{"id":"https://openalex.org/C97854310","wikidata":"https://www.wikidata.org/wiki/Q19541","display_name":"Search engine","level":2,"score":0.4539206027984619},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3391084671020508},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3349626064300537},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.32679030299186707},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1721184253692627},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.12624576687812805},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/iccabs.2014.6863913","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iccabs.2014.6863913","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W1981593008","https://openalex.org/W2026465178","https://openalex.org/W2047275456","https://openalex.org/W2053943711","https://openalex.org/W2064605021","https://openalex.org/W2112078820","https://openalex.org/W2130706354","https://openalex.org/W2142079394","https://openalex.org/W2147898188"],"related_works":["https://openalex.org/W2090763504","https://openalex.org/W148178222","https://openalex.org/W2104657898","https://openalex.org/W1948992892","https://openalex.org/W1886884218","https://openalex.org/W1910826599","https://openalex.org/W2012353789","https://openalex.org/W2530420969","https://openalex.org/W2051187167","https://openalex.org/W1980100242"],"abstract_inverted_index":{"Although":[0],"a":[1,29,35,50],"number":[2],"of":[3],"sequence":[4],"database":[5],"search":[6,10,40],"tools":[7],"and":[8,48,63],"post-database":[9],"algorithms":[11],"for":[12,44],"filtering":[13],"target":[14,46,58],"PSMs":[15,24,69],"have":[16],"been":[17],"developed,":[18],"the":[19,22,41],"discrepancy":[20],"among":[21],"output":[23],"is":[25],"usually":[26],"significant,":[27],"remaining":[28],"few":[30],"disputable":[31],"PSMs.":[32,59],"We":[33],"employ":[34],"SVM-based":[36],"learning":[37],"model":[38],"to":[39,55],"optimal":[42],"weight":[43],"each":[45],"PSM":[47],"develop":[49],"new":[51],"score":[52],"system,":[53],"C-Ranker,":[54],"rank":[56],"all":[57],"Compared":[60],"with":[61],"PeptideProphet":[62],"Percolator,":[64],"CRanker":[65],"has":[66],"identified":[67],"more":[68],"under":[70],"similar":[71],"false":[72],"discover":[73],"rates":[74],"over":[75],"different":[76],"datasets.":[77]},"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
