{"id":"https://openalex.org/W2052174659","doi":"https://doi.org/10.1109/iccabs.2012.6182659","title":"Poster: Public health applications of metagenomic data using publicly available computing framework","display_name":"Poster: Public health applications of metagenomic data using publicly available computing framework","publication_year":2012,"publication_date":"2012-02-01","ids":{"openalex":"https://openalex.org/W2052174659","doi":"https://doi.org/10.1109/iccabs.2012.6182659","mag":"2052174659"},"language":"en","primary_location":{"id":"doi:10.1109/iccabs.2012.6182659","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iccabs.2012.6182659","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE 2nd International Conference on Computational Advances in Bio and medical Sciences (ICCABS)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103235701","display_name":"Marissa N. Smith","orcid":"https://orcid.org/0009-0004-0950-3824"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Marissa Smith","raw_affiliation_strings":["Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA"],"affiliations":[{"raw_affiliation_string":"Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA","institution_ids":["https://openalex.org/I201448701","https://openalex.org/I58610484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021370968","display_name":"Jesse A. Port","orcid":null},"institutions":[{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jesse Port","raw_affiliation_strings":["Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA"],"affiliations":[{"raw_affiliation_string":"Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA","institution_ids":["https://openalex.org/I201448701","https://openalex.org/I58610484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084972807","display_name":"Jame C. Wallace","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jame C. Wallace","raw_affiliation_strings":["Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA"],"affiliations":[{"raw_affiliation_string":"Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA","institution_ids":["https://openalex.org/I201448701","https://openalex.org/I58610484"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001722260","display_name":"Elaine M. Faustman","orcid":"https://orcid.org/0000-0002-3085-6403"},"institutions":[{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elaine Faustman","raw_affiliation_strings":["Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA"],"affiliations":[{"raw_affiliation_string":"Department of Environmental and Occupational Health Sciences, School of Public Health, University of Washington, Seattle, USA","institution_ids":["https://openalex.org/I201448701","https://openalex.org/I58610484"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5103235701"],"corresponding_institution_ids":["https://openalex.org/I201448701","https://openalex.org/I58610484"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.09948255,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9359999895095825,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9359999895095825,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9110000133514404,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.9141271114349365},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6043637990951538},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5865688920021057},{"id":"https://openalex.org/keywords/server","display_name":"Server","score":0.48523950576782227},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.434699147939682},{"id":"https://openalex.org/keywords/risk-analysis","display_name":"Risk analysis (engineering)","score":0.3659648299217224},{"id":"https://openalex.org/keywords/business","display_name":"Business","score":0.18388381600379944},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.1789935827255249},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.08505693078041077},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08027705550193787}],"concepts":[{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.9141271114349365},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6043637990951538},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5865688920021057},{"id":"https://openalex.org/C93996380","wikidata":"https://www.wikidata.org/wiki/Q44127","display_name":"Server","level":2,"score":0.48523950576782227},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.434699147939682},{"id":"https://openalex.org/C112930515","wikidata":"https://www.wikidata.org/wiki/Q4389547","display_name":"Risk analysis (engineering)","level":1,"score":0.3659648299217224},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.18388381600379944},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.1789935827255249},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.08505693078041077},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08027705550193787},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/iccabs.2012.6182659","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iccabs.2012.6182659","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE 2nd International Conference on Computational Advances in Bio and medical Sciences (ICCABS)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W638577851","https://openalex.org/W2968354375","https://openalex.org/W2359440920","https://openalex.org/W2889550857","https://openalex.org/W3013372948","https://openalex.org/W3135997498","https://openalex.org/W4242417330","https://openalex.org/W4388282505","https://openalex.org/W3198631238","https://openalex.org/W4255657129"],"abstract_inverted_index":{"Recent":[0],"advances":[1],"in":[2,96],"next":[3,36,82],"generation":[4,37,83],"sequencing":[5,38,84],"technology":[6,39,61,85],"and":[7,12,18,27,40,54,58,86,109],"publicly":[8,41,89],"available":[9,42,90],"computing":[10,43,91],"programs":[11],"servers":[13],"have":[14],"increased":[15],"the":[16,33,63,97],"accessibility":[17],"applications":[19],"of":[20,35,65,99],"microbial":[21],"metagenomic":[22,47,73],"analysis":[23],"beyond":[24],"traditional":[25],"genomics":[26],"bioinformatic":[28],"analysis.":[29,74],"We":[30],"propose":[31],"that":[32],"advent":[34],"frameworks":[44,92],"make":[45],"environmental":[46,53,78],"monitoring":[48,68],"a":[49],"potential":[50],"tool":[51],"for":[52],"public":[55,66,100],"health":[56,67,101],"research":[57],"decision-making.":[59],"As":[60],"advances,":[62],"future":[64],"will":[69],"be":[70,94],"steered":[71],"towards":[72],"Result":[75],"shows":[76],"how":[77],"sampling":[79],"processed":[80],"by":[81,88],"analyzed":[87],"can":[93],"utilized":[95],"areas":[98],"surveillance,":[102],"risk":[103,105],"assessment,":[104],"communication,":[106],"policy":[107],"development":[108],"research.":[110]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
