{"id":"https://openalex.org/W4408352851","doi":"https://doi.org/10.1109/icassp49660.2025.10890640","title":"Exploring the Distribution of Cell Subpopulations in Pancreatic Ductal Adenocarcinoma Slides by Joint Spatial Transcriptomics and Pathology Data","display_name":"Exploring the Distribution of Cell Subpopulations in Pancreatic Ductal Adenocarcinoma Slides by Joint Spatial Transcriptomics and Pathology Data","publication_year":2025,"publication_date":"2025-03-12","ids":{"openalex":"https://openalex.org/W4408352851","doi":"https://doi.org/10.1109/icassp49660.2025.10890640"},"language":"en","primary_location":{"id":"doi:10.1109/icassp49660.2025.10890640","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icassp49660.2025.10890640","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ICASSP 2025 - 2025 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016412264","display_name":"Yaqi Deng","orcid":"https://orcid.org/0000-0003-3585-8093"},"institutions":[{"id":"https://openalex.org/I1297991670","display_name":"Southwest University of Science and Technology","ror":"https://ror.org/04d996474","country_code":"CN","type":"education","lineage":["https://openalex.org/I1297991670"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yaqi Deng","raw_affiliation_strings":["Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China","institution_ids":["https://openalex.org/I1297991670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102805622","display_name":"Wenjie Cai","orcid":"https://orcid.org/0000-0002-2496-2322"},"institutions":[{"id":"https://openalex.org/I1297991670","display_name":"Southwest University of Science and Technology","ror":"https://ror.org/04d996474","country_code":"CN","type":"education","lineage":["https://openalex.org/I1297991670"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenjie Cai","raw_affiliation_strings":["Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China","institution_ids":["https://openalex.org/I1297991670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040919799","display_name":"B. Song","orcid":null},"institutions":[{"id":"https://openalex.org/I1297991670","display_name":"Southwest University of Science and Technology","ror":"https://ror.org/04d996474","country_code":"CN","type":"education","lineage":["https://openalex.org/I1297991670"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bentao Song","raw_affiliation_strings":["Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China","institution_ids":["https://openalex.org/I1297991670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040155601","display_name":"Bin Yang","orcid":"https://orcid.org/0000-0002-4244-1635"},"institutions":[{"id":"https://openalex.org/I1297991670","display_name":"Southwest University of Science and Technology","ror":"https://ror.org/04d996474","country_code":"CN","type":"education","lineage":["https://openalex.org/I1297991670"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Yang","raw_affiliation_strings":["Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China","institution_ids":["https://openalex.org/I1297991670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101979814","display_name":"Lingming Kong","orcid":"https://orcid.org/0000-0001-7507-5232"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lingming Kong","raw_affiliation_strings":["University of Science and Technology of China,Division of Life Sciences and Medicine,Department of General Surgery, The First Affiliated Hospital of USTC,Hefei,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China,Division of Life Sciences and Medicine,Department of General Surgery, The First Affiliated Hospital of USTC,Hefei,China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100419918","display_name":"Qingfeng Wang","orcid":"https://orcid.org/0000-0002-9654-6731"},"institutions":[{"id":"https://openalex.org/I1297991670","display_name":"Southwest University of Science and Technology","ror":"https://ror.org/04d996474","country_code":"CN","type":"education","lineage":["https://openalex.org/I1297991670"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qingfeng Wang","raw_affiliation_strings":["Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China","institution_ids":["https://openalex.org/I1297991670"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020146420","display_name":"Jun Huang","orcid":"https://orcid.org/0000-0001-9393-4416"},"institutions":[{"id":"https://openalex.org/I1297991670","display_name":"Southwest University of Science and Technology","ror":"https://ror.org/04d996474","country_code":"CN","type":"education","lineage":["https://openalex.org/I1297991670"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Huang","raw_affiliation_strings":["Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southwest University of Science and Technology,School of Computer Science and Technology,Mianyang,China","institution_ids":["https://openalex.org/I1297991670"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10231","display_name":"Pancreatic and Hepatic Oncology Research","score":0.9855999946594238,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10231","display_name":"Pancreatic and Hepatic Oncology Research","score":0.9855999946594238,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9645000100135803,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9309999942779541,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pancreatic-ductal-adenocarcinoma","display_name":"Pancreatic ductal adenocarcinoma","score":0.8013002276420593},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.5278244614601135},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.5039834380149841},{"id":"https://openalex.org/keywords/adenocarcinoma","display_name":"Adenocarcinoma","score":0.49229609966278076},{"id":"https://openalex.org/keywords/joint","display_name":"Joint (building)","score":0.4917023777961731},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.4042116105556488},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3795371651649475},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3413107991218567},{"id":"https://openalex.org/keywords/pancreatic-cancer","display_name":"Pancreatic cancer","score":0.221853107213974},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.21859002113342285},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.10845211148262024},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10627013444900513},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.08948585391044617},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.06831017136573792}],"concepts":[{"id":"https://openalex.org/C2992026798","wikidata":"https://www.wikidata.org/wiki/Q212961","display_name":"Pancreatic ductal adenocarcinoma","level":4,"score":0.8013002276420593},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.5278244614601135},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.5039834380149841},{"id":"https://openalex.org/C2781182431","wikidata":"https://www.wikidata.org/wiki/Q356033","display_name":"Adenocarcinoma","level":3,"score":0.49229609966278076},{"id":"https://openalex.org/C18555067","wikidata":"https://www.wikidata.org/wiki/Q8375051","display_name":"Joint (building)","level":2,"score":0.4917023777961731},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4042116105556488},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3795371651649475},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3413107991218567},{"id":"https://openalex.org/C2780210213","wikidata":"https://www.wikidata.org/wiki/Q212961","display_name":"Pancreatic cancer","level":3,"score":0.221853107213974},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.21859002113342285},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.10845211148262024},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10627013444900513},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.08948585391044617},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.06831017136573792},{"id":"https://openalex.org/C170154142","wikidata":"https://www.wikidata.org/wiki/Q150737","display_name":"Architectural engineering","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/icassp49660.2025.10890640","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icassp49660.2025.10890640","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ICASSP 2025 - 2025 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.4300000071525574}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1902027874","https://openalex.org/W2060324894","https://openalex.org/W2194775991","https://openalex.org/W2343160907","https://openalex.org/W2965620020","https://openalex.org/W2982083293","https://openalex.org/W3036371598","https://openalex.org/W3205213119","https://openalex.org/W3206229516","https://openalex.org/W4205817967","https://openalex.org/W4214493665","https://openalex.org/W4292641742","https://openalex.org/W4306403570","https://openalex.org/W4312957757","https://openalex.org/W4317566052","https://openalex.org/W4323350443","https://openalex.org/W4324144441","https://openalex.org/W4379377108","https://openalex.org/W4384493234","https://openalex.org/W4386076358","https://openalex.org/W4390242455","https://openalex.org/W4390992192","https://openalex.org/W4392190141","https://openalex.org/W6762718338"],"related_works":["https://openalex.org/W2399513595","https://openalex.org/W4388386498","https://openalex.org/W2028462563","https://openalex.org/W2982720988","https://openalex.org/W4388725868","https://openalex.org/W2104762330","https://openalex.org/W4379374180","https://openalex.org/W2523545060","https://openalex.org/W4229998356","https://openalex.org/W4392059188"],"abstract_inverted_index":{"Current":[0],"spatial":[1,104],"transcriptomics":[2,105],"(ST)":[3],"technology":[4,32],"can":[5,33],"integrate":[6],"stained":[7],"pathological":[8,27,108],"slides":[9,28],"with":[10,67,83],"RNA":[11],"sequencing,":[12],"providing":[13],"precise":[14],"information":[15],"on":[16,54,97,115],"gene":[17,84],"expression":[18],"and":[19,69,72,106],"cell":[20,118],"types.":[21],"However,":[22],"the":[23,55],"unique":[24],"handling":[25],"of":[26],"required":[29],"by":[30],"ST":[31],"lead":[34],"to":[35,79,112],"image":[36],"quality":[37],"issues,":[38],"impacting":[39],"model":[40,95],"performance.":[41],"To":[42],"address":[43],"this":[44,98],"challenge,":[45],"we":[46,59],"applied":[47],"Structure":[48],"Preserving":[49],"Color":[50],"Normalization":[51],"(SPCN),":[52],"based":[53],"Beer-Lambert":[56],"law.":[57],"Here,":[58],"use":[60],"a":[61],"pancreatic":[62],"ductal":[63],"adenocarcinoma":[64],"(PDAC)":[65],"dataset":[66],"class-level":[68],"gene-level":[70],"annotations,":[71],"introduced":[73],"Gene":[74],"Feature":[75],"Align":[76],"(GFA)":[77],"Loss":[78],"align":[80],"classification":[81],"features":[82],"expression,":[85],"resulting":[86],"in":[87],"clearer":[88],"decision":[89],"boundaries.":[90],"Our":[91],"approach":[92],"significantly":[93],"enhances":[94],"performance":[96],"dataset,":[99],"offering":[100],"novel":[101],"solutions":[102],"for":[103],"paired":[107],"images,":[109],"while":[110],"contributing":[111],"limited":[113],"research":[114],"PDAC":[116],"slide":[117],"distribution":[119],"prediction":[120],"through":[121],"deep":[122],"neural":[123],"networks.":[124]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
