{"id":"https://openalex.org/W2146542760","doi":"https://doi.org/10.1109/icarcv.2004.1469036","title":"Discovering possible context dependences around SNP sites in human genes with Bayesian network learning","display_name":"Discovering possible context dependences around SNP sites in human genes with Bayesian network learning","publication_year":2005,"publication_date":"2005-07-27","ids":{"openalex":"https://openalex.org/W2146542760","doi":"https://doi.org/10.1109/icarcv.2004.1469036","mag":"2146542760"},"language":"en","primary_location":{"id":"doi:10.1109/icarcv.2004.1469036","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icarcv.2004.1469036","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ICARCV 2004 8th Control, Automation, Robotics and Vision Conference, 2004.","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109239908","display_name":"Xi Ma","orcid":null},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xi Ma","raw_affiliation_strings":["MOE Key Laboratory of Bioinformatics / Department of Automation, Tsinghua University, Beijing, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MOE Key Laboratory of Bioinformatics / Department of Automation, Tsinghua University, Beijing, Beijing, China","institution_ids":["https://openalex.org/I99065089"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015753751","display_name":"Jun Cai","orcid":"https://orcid.org/0000-0001-9495-1226"},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Cai","raw_affiliation_strings":["MOE Key Laboratory of Bioinformatics / Department of Automation, Tsinghua University, Beijing, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MOE Key Laboratory of Bioinformatics / Department of Automation, Tsinghua University, Beijing, Beijing, China","institution_ids":["https://openalex.org/I99065089"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101596498","display_name":"Wei Hu","orcid":"https://orcid.org/0000-0003-4880-991X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wei Hu","raw_affiliation_strings":["Intel China Research Center Limited, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intel China Research Center Limited, Beijing, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100391587","display_name":"Yimin Zhang","orcid":"https://orcid.org/0000-0001-7673-8800"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yimin Zhang","raw_affiliation_strings":["Intel China Research Center Limited, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intel China Research Center Limited, Beijing, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033512723","display_name":"Yanda Li","orcid":"https://orcid.org/0000-0002-9439-202X"},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanda Li","raw_affiliation_strings":["MOE Key Laboratory of Bioinformatics / Department of Automation, Tsinghua University, Beijing, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MOE Key Laboratory of Bioinformatics / Department of Automation, Tsinghua University, Beijing, Beijing, China","institution_ids":["https://openalex.org/I99065089"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081242795","display_name":"Xuegong Zhang","orcid":"https://orcid.org/0000-0002-9684-5643"},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuegong Zhang","raw_affiliation_strings":["MOE Key Laboratory of Bioinformatics / Department of Automation, Tsinghua University, Beijing, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MOE Key Laboratory of Bioinformatics / Department of Automation, Tsinghua University, Beijing, Beijing, China","institution_ids":["https://openalex.org/I99065089"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"2","issue":null,"first_page":"1315","last_page":"1319"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.7990661859512329},{"id":"https://openalex.org/keywords/snp","display_name":"SNP","score":0.7565717101097107},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.6217544078826904},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6208418607711792},{"id":"https://openalex.org/keywords/tag-snp","display_name":"Tag SNP","score":0.5533605813980103},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.547032356262207},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5061809420585632},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.45804235339164734},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.4363466501235962},{"id":"https://openalex.org/keywords/bayesian-network","display_name":"Bayesian network","score":0.42559847235679626},{"id":"https://openalex.org/keywords/allele","display_name":"Allele","score":0.4227694869041443},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.39668357372283936},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.38181862235069275},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1969316005706787},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.18032124638557434},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.09650009870529175}],"concepts":[{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.7990661859512329},{"id":"https://openalex.org/C139275648","wikidata":"https://www.wikidata.org/wiki/Q17134011","display_name":"SNP","level":5,"score":0.7565717101097107},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6217544078826904},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6208418607711792},{"id":"https://openalex.org/C55060382","wikidata":"https://www.wikidata.org/wiki/Q7675093","display_name":"Tag SNP","level":5,"score":0.5533605813980103},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.547032356262207},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5061809420585632},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45804235339164734},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.4363466501235962},{"id":"https://openalex.org/C33724603","wikidata":"https://www.wikidata.org/wiki/Q812540","display_name":"Bayesian network","level":2,"score":0.42559847235679626},{"id":"https://openalex.org/C180754005","wikidata":"https://www.wikidata.org/wiki/Q80726","display_name":"Allele","level":3,"score":0.4227694869041443},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.39668357372283936},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.38181862235069275},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1969316005706787},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.18032124638557434},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.09650009870529175},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/icarcv.2004.1469036","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icarcv.2004.1469036","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ICARCV 2004 8th Control, Automation, Robotics and Vision Conference, 2004.","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322392","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W1615454278","https://openalex.org/W2007349518","https://openalex.org/W2031946640","https://openalex.org/W2037234934","https://openalex.org/W2058970027","https://openalex.org/W2060563775","https://openalex.org/W2065087403","https://openalex.org/W2072885673","https://openalex.org/W2083702725","https://openalex.org/W2119394710","https://openalex.org/W3006549497","https://openalex.org/W6636455871"],"related_works":["https://openalex.org/W1997352593","https://openalex.org/W1978000554","https://openalex.org/W2583457094","https://openalex.org/W2415959690","https://openalex.org/W2745006295","https://openalex.org/W2057218249","https://openalex.org/W2329144129","https://openalex.org/W2047365082","https://openalex.org/W2383248267","https://openalex.org/W2388756488"],"abstract_inverted_index":{"Single":[0],"nucleotide":[1],"polymorphisms":[2],"(SNPs)":[3],"are":[4,12,138],"loci":[5,112],"on":[6],"the":[7,15,31,72,77,117,127,160,163],"genome":[8],"where":[9],"different":[10,135],"alleles":[11,75],"observed":[13,20],"in":[14,30,50,59,67,92,101,115,126],"population.":[16],"It":[17],"has":[18],"been":[19],"that":[21],"there":[22],"might":[23],"be":[24],"some":[25,111],"patterns":[26],"or":[27],"context":[28,142],"dependences":[29,40,91,143],"sequence":[32,93,172],"segments":[33,94],"adjacent":[34],"to":[35,71,87],"SNPs":[36,49,56],"sites.":[37],"Discovering":[38],"such":[39],"is":[41,85],"very":[42],"important":[43,148],"for":[44,150,170],"understanding":[45],"possible":[46,90],"origins":[47],"of":[48,57,74,89,162],"evolution.":[51],"We":[52],"collected":[53,104],"519,767":[54],"bi-allelic":[55],"human":[58],"gene":[60],"regions":[61],"from":[62],"HGBASE":[63],"and":[64,121],"separated":[65],"them":[66],"6":[68,118],"groups":[69,120,137],"according":[70],"types":[73],"at":[76],"SNP":[78,119,136,145],"loci.":[79],"Bayesian":[80,164],"network":[81,165],"structure":[82],"learning":[83],"technique":[84],"applied":[86],"discovery":[88],"around":[95,144],"these":[96],"sites":[97,146],"as":[98,100,105,167],"well":[99],"reference":[102,128],"sequences":[103,154],"comparison.":[106],"Noticeable":[107],"probabilistic":[108],"correlations":[109],"among":[110],"were":[113],"detected":[114],"all":[116],"nothing":[122],"significant":[123],"was":[124],"found":[125,133],"sequences.":[129],"The":[130,156],"dependence":[131],"relations":[132],"with":[134],"different.":[139],"These":[140],"putative":[141],"provide":[147],"hints":[149],"further":[151],"analyzing":[152],"SNP-related":[153],"patterns.":[155],"work":[157],"also":[158],"illustrates":[159],"powerfulness":[161],"method":[166],"a":[168],"tool":[169],"biological":[171],"analysis.":[173]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
