{"id":"https://openalex.org/W2043325015","doi":"https://doi.org/10.1109/icacci.2013.6637226","title":"Using formal concept analysis for mining hyomethylated genes among breast cancer tumors subtypes","display_name":"Using formal concept analysis for mining hyomethylated genes among breast cancer tumors subtypes","publication_year":2013,"publication_date":"2013-08-01","ids":{"openalex":"https://openalex.org/W2043325015","doi":"https://doi.org/10.1109/icacci.2013.6637226","mag":"2043325015"},"language":"en","primary_location":{"id":"doi:10.1109/icacci.2013.6637226","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icacci.2013.6637226","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 International Conference on Advances in Computing, Communications and Informatics (ICACCI)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082224873","display_name":"Islam Ibrahim Amin","orcid":"https://orcid.org/0000-0002-0321-8027"},"institutions":[{"id":"https://openalex.org/I145487455","display_name":"Cairo University","ror":"https://ror.org/03q21mh05","country_code":"EG","type":"education","lineage":["https://openalex.org/I145487455"]}],"countries":["EG"],"is_corresponding":true,"raw_author_name":"Islam Ibrahim Amin","raw_affiliation_strings":["Cairo University, Giza, EG","Inst. Of Stat. Studies & Researches, Cairo Univ., Cairo, Egypt"],"affiliations":[{"raw_affiliation_string":"Cairo University, Giza, EG","institution_ids":["https://openalex.org/I145487455"]},{"raw_affiliation_string":"Inst. Of Stat. Studies & Researches, Cairo Univ., Cairo, Egypt","institution_ids":["https://openalex.org/I145487455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039362444","display_name":"Samar K. Kassim","orcid":"https://orcid.org/0000-0002-4359-6620"},"institutions":[{"id":"https://openalex.org/I107720978","display_name":"Ain Shams University","ror":"https://ror.org/00cb9w016","country_code":"EG","type":"education","lineage":["https://openalex.org/I107720978"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Samar K. Kassim","raw_affiliation_strings":["Faculty of Medicine, Ain Shams University, Cairo, Egypt","Fac. of Med., Ain Shams Univ., Cairo, Egypt"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine, Ain Shams University, Cairo, Egypt","institution_ids":["https://openalex.org/I107720978"]},{"raw_affiliation_string":"Fac. of Med., Ain Shams Univ., Cairo, Egypt","institution_ids":["https://openalex.org/I107720978"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085432173","display_name":"Aboul Ella Hassanien","orcid":"https://orcid.org/0000-0002-9989-6681"},"institutions":[{"id":"https://openalex.org/I145487455","display_name":"Cairo University","ror":"https://ror.org/03q21mh05","country_code":"EG","type":"education","lineage":["https://openalex.org/I145487455"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Aboul Ella Hassanien","raw_affiliation_strings":["Faculty of Computers and Information, Cairo University, Cairo, Egypt","Fac. of Comput. & Inf, Cairo Univ., Cairo, Egypt"],"affiliations":[{"raw_affiliation_string":"Faculty of Computers and Information, Cairo University, Cairo, Egypt","institution_ids":["https://openalex.org/I145487455"]},{"raw_affiliation_string":"Fac. of Comput. & Inf, Cairo Univ., Cairo, Egypt","institution_ids":["https://openalex.org/I145487455"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048944548","display_name":"Hesham A. Hefny","orcid":"https://orcid.org/0000-0001-5862-675X"},"institutions":[{"id":"https://openalex.org/I145487455","display_name":"Cairo University","ror":"https://ror.org/03q21mh05","country_code":"EG","type":"education","lineage":["https://openalex.org/I145487455"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Hesham A. Hefny","raw_affiliation_strings":["Cairo University, Giza, EG","Inst. Of Stat. Studies & Researches, Cairo Univ., Cairo, Egypt"],"affiliations":[{"raw_affiliation_string":"Cairo University, Giza, EG","institution_ids":["https://openalex.org/I145487455"]},{"raw_affiliation_string":"Inst. Of Stat. Studies & Researches, Cairo Univ., Cairo, Egypt","institution_ids":["https://openalex.org/I145487455"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5082224873"],"corresponding_institution_ids":["https://openalex.org/I145487455"],"apc_list":null,"apc_paid":null,"fwci":2.1752,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.87626379,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"111","issue":null,"first_page":"521","last_page":"526"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11063","display_name":"Rough Sets and Fuzzy Logic","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11063","display_name":"Rough Sets and Fuzzy Logic","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11106","display_name":"Data Management and Algorithms","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.7681098580360413},{"id":"https://openalex.org/keywords/cpg-site","display_name":"CpG site","score":0.7549156546592712},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.6189180612564087},{"id":"https://openalex.org/keywords/methylation","display_name":"Methylation","score":0.6073107123374939},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5374174118041992},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4667860269546509},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.46504533290863037},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.4645611345767975},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.432227224111557},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3449481725692749},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.34203094244003296},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.1948939859867096}],"concepts":[{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.7681098580360413},{"id":"https://openalex.org/C140173407","wikidata":"https://www.wikidata.org/wiki/Q1138358","display_name":"CpG site","level":5,"score":0.7549156546592712},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.6189180612564087},{"id":"https://openalex.org/C33288867","wikidata":"https://www.wikidata.org/wiki/Q518328","display_name":"Methylation","level":3,"score":0.6073107123374939},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5374174118041992},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4667860269546509},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46504533290863037},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.4645611345767975},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.432227224111557},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3449481725692749},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.34203094244003296},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.1948939859867096},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/icacci.2013.6637226","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icacci.2013.6637226","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 International Conference on Advances in Computing, Communications and Informatics (ICACCI)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.7099999785423279,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1965222198","https://openalex.org/W1973767578","https://openalex.org/W1976365676","https://openalex.org/W2074310030","https://openalex.org/W2081756096","https://openalex.org/W2131573416","https://openalex.org/W2133719125","https://openalex.org/W2142923756","https://openalex.org/W2148405421","https://openalex.org/W2158312327","https://openalex.org/W2169481132","https://openalex.org/W4251302245","https://openalex.org/W4255318870","https://openalex.org/W6679894681","https://openalex.org/W6684955767"],"related_works":["https://openalex.org/W2902329290","https://openalex.org/W2169344098","https://openalex.org/W2139872319","https://openalex.org/W2052355316","https://openalex.org/W2046964473","https://openalex.org/W2107880877","https://openalex.org/W2151182744","https://openalex.org/W2921336251","https://openalex.org/W2944524138","https://openalex.org/W2024490794"],"abstract_inverted_index":{"Hypomethylation":[0],"of":[1,12,22,43,107],"DNA":[2,37,54],"have":[3],"been":[4],"associated":[5,15],"with":[6,16,85],"cancer":[7,45,79,92,118],"in":[8],"several":[9],"investigations.":[10],"Hypomethylated":[11],"CPG":[13],"islands":[14],"promoters":[17],"can":[18,35],"affect":[19],"the":[20,53,74,113],"expression":[21],"genes":[23,76,88],"to":[24,51],"be":[25],"more":[26],"expressed.":[27],"The":[28,94],"Illumina":[29],"GoldenGate":[30],"Methylation":[31],"Cancer":[32],"Panel":[33],"I":[34],"measure":[36],"methylation":[38,55],"at":[39],"1505":[40],"CpG":[41],"loci":[42],"806":[44],"related":[46],"genes.":[47],"A":[48],"powerful":[49],"tools":[50],"analysis":[52,64],"data":[56,69],"are":[57],"needed.":[58],"In":[59],"this":[60],"paper,":[61],"formal":[62,83,102,108],"concept":[63,95],"(FCA)":[65],"is":[66,97,105],"used":[67],"as":[68],"mining":[70,73],"tool":[71],"for":[72,89],"hypomethylated":[75,87],"among":[77,116],"breast":[78,91,117],"subtypes,":[80],"by":[81],"building":[82],"concepts":[84],"significant":[86],"each":[90],"subtypes.":[93,119],"lattice":[96,111],"constructed":[98],"based":[99],"on":[100],"a":[101],"context":[103],"which":[104],"composed":[106],"concepts.":[109],"This":[110],"reflects":[112],"biological":[114],"relationships":[115]},"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
