{"id":"https://openalex.org/W1826709545","doi":"https://doi.org/10.1109/hpdc.2005.1520959","title":"Generosity and gluttony in GEMS: grid enabled molecular simulations","display_name":"Generosity and gluttony in GEMS: grid enabled molecular simulations","publication_year":2005,"publication_date":"2005-10-24","ids":{"openalex":"https://openalex.org/W1826709545","doi":"https://doi.org/10.1109/hpdc.2005.1520959","mag":"1826709545"},"language":"en","primary_location":{"id":"doi:10.1109/hpdc.2005.1520959","is_oa":false,"landing_page_url":"https://doi.org/10.1109/hpdc.2005.1520959","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"HPDC-14. Proceedings. 14th IEEE International Symposium on High Performance Distributed Computing, 2005.","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020776475","display_name":"Justin M. Wozniak","orcid":"https://orcid.org/0000-0002-2441-2048"},"institutions":[{"id":"https://openalex.org/I107639228","display_name":"University of Notre Dame","ror":"https://ror.org/00mkhxb43","country_code":"US","type":"education","lineage":["https://openalex.org/I107639228"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"J.M. Wozniak","raw_affiliation_strings":["Department of Computer Science & Engineering, University of Notre Dame, Notre Dame, IN, USA","Dept. of Comput. Sci. & Eng., Notre Dame Univ., IN, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, University of Notre Dame, Notre Dame, IN, USA","institution_ids":["https://openalex.org/I107639228"]},{"raw_affiliation_string":"Dept. of Comput. Sci. & Eng., Notre Dame Univ., IN, USA","institution_ids":["https://openalex.org/I107639228"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055783862","display_name":"Paul Brenner","orcid":"https://orcid.org/0000-0002-2568-9786"},"institutions":[{"id":"https://openalex.org/I107639228","display_name":"University of Notre Dame","ror":"https://ror.org/00mkhxb43","country_code":"US","type":"education","lineage":["https://openalex.org/I107639228"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. Brenner","raw_affiliation_strings":["Department of Computer Science & Engineering, University of Notre Dame, Notre Dame, IN, USA","Dept. of Comput. Sci. & Eng., Notre Dame Univ., IN, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, University of Notre Dame, Notre Dame, IN, USA","institution_ids":["https://openalex.org/I107639228"]},{"raw_affiliation_string":"Dept. of Comput. Sci. & Eng., Notre Dame Univ., IN, USA","institution_ids":["https://openalex.org/I107639228"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007301255","display_name":"Douglas Thain","orcid":"https://orcid.org/0000-0001-5218-1956"},"institutions":[{"id":"https://openalex.org/I107639228","display_name":"University of Notre Dame","ror":"https://ror.org/00mkhxb43","country_code":"US","type":"education","lineage":["https://openalex.org/I107639228"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Thain","raw_affiliation_strings":["Department of Computer Science & Engineering, University of Notre Dame, Notre Dame, IN, USA","Dept. of Comput. Sci. & Eng., Notre Dame Univ., IN, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, University of Notre Dame, Notre Dame, IN, USA","institution_ids":["https://openalex.org/I107639228"]},{"raw_affiliation_string":"Dept. of Comput. Sci. & Eng., Notre Dame Univ., IN, USA","institution_ids":["https://openalex.org/I107639228"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048928683","display_name":"Aaron Striegel","orcid":"https://orcid.org/0000-0002-3157-2859"},"institutions":[{"id":"https://openalex.org/I107639228","display_name":"University of Notre Dame","ror":"https://ror.org/00mkhxb43","country_code":"US","type":"education","lineage":["https://openalex.org/I107639228"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Striegel","raw_affiliation_strings":["Department of Computer Science & Engineering, University of Notre Dame, Notre Dame, IN, USA","Dept. of Comput. Sci. & Eng., Notre Dame Univ., IN, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, University of Notre Dame, Notre Dame, IN, USA","institution_ids":["https://openalex.org/I107639228"]},{"raw_affiliation_string":"Dept. of Comput. Sci. & Eng., Notre Dame Univ., IN, USA","institution_ids":["https://openalex.org/I107639228"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5039906501","display_name":"Jes\u00fas A. Izaguirre","orcid":"https://orcid.org/0000-0002-4687-4884"},"institutions":[{"id":"https://openalex.org/I107639228","display_name":"University of Notre Dame","ror":"https://ror.org/00mkhxb43","country_code":"US","type":"education","lineage":["https://openalex.org/I107639228"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J.A. Izaguirre","raw_affiliation_strings":["Department of Computer Science & Engineering, University of Notre Dame, Notre Dame, IN, USA","Dept. of Comput. Sci. & Eng., Notre Dame Univ., IN, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, University of Notre Dame, Notre Dame, IN, USA","institution_ids":["https://openalex.org/I107639228"]},{"raw_affiliation_string":"Dept. of Comput. Sci. & Eng., Notre Dame Univ., IN, USA","institution_ids":["https://openalex.org/I107639228"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5020776475"],"corresponding_institution_ids":["https://openalex.org/I107639228"],"apc_list":null,"apc_paid":null,"fwci":3.2829,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.92814772,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"2005","issue":null,"first_page":"191","last_page":"200"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10742","display_name":"Peer-to-Peer Network Technologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/generosity","display_name":"Generosity","score":0.7949205636978149},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.744106113910675},{"id":"https://openalex.org/keywords/replicate","display_name":"Replicate","score":0.6325637102127075},{"id":"https://openalex.org/keywords/pooling","display_name":"Pooling","score":0.5953827500343323},{"id":"https://openalex.org/keywords/replication","display_name":"Replication (statistics)","score":0.48428434133529663},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.4615599513053894},{"id":"https://openalex.org/keywords/computer-data-storage","display_name":"Computer data storage","score":0.4550635814666748},{"id":"https://openalex.org/keywords/data-access","display_name":"Data access","score":0.4493841528892517},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.3711168169975281},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.23646271228790283},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.19582286477088928},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09524267911911011}],"concepts":[{"id":"https://openalex.org/C2779861158","wikidata":"https://www.wikidata.org/wiki/Q1549811","display_name":"Generosity","level":2,"score":0.7949205636978149},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.744106113910675},{"id":"https://openalex.org/C2781162219","wikidata":"https://www.wikidata.org/wiki/Q26250693","display_name":"Replicate","level":2,"score":0.6325637102127075},{"id":"https://openalex.org/C70437156","wikidata":"https://www.wikidata.org/wiki/Q7228652","display_name":"Pooling","level":2,"score":0.5953827500343323},{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.48428434133529663},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.4615599513053894},{"id":"https://openalex.org/C194739806","wikidata":"https://www.wikidata.org/wiki/Q66221","display_name":"Computer data storage","level":2,"score":0.4550635814666748},{"id":"https://openalex.org/C47487241","wikidata":"https://www.wikidata.org/wiki/Q5227230","display_name":"Data access","level":2,"score":0.4493841528892517},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.3711168169975281},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.23646271228790283},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.19582286477088928},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09524267911911011},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C27206212","wikidata":"https://www.wikidata.org/wiki/Q34178","display_name":"Theology","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1109/hpdc.2005.1520959","is_oa":false,"landing_page_url":"https://doi.org/10.1109/hpdc.2005.1520959","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"HPDC-14. Proceedings. 14th IEEE International Symposium on High Performance Distributed Computing, 2005.","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.138.899","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.138.899","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cse.nd.edu/~dthain/courses/classconf/wowsys2004/papers/gems-hpdc14.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.69.2689","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.69.2689","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://gipse.cse.nd.edu/GEMS/papers/GEMS-Gluttony.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.73.1823","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.73.1823","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.nd.edu/~izaguirr/papers/wozniakj_gems.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4300000071525574,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W1523826187","https://openalex.org/W1675496650","https://openalex.org/W1809943808","https://openalex.org/W1970019308","https://openalex.org/W1979573134","https://openalex.org/W1989377994","https://openalex.org/W2005373714","https://openalex.org/W2022288592","https://openalex.org/W2066636486","https://openalex.org/W2096122599","https://openalex.org/W2104210894","https://openalex.org/W2107571548","https://openalex.org/W2110298485","https://openalex.org/W2110631345","https://openalex.org/W2118428193","https://openalex.org/W2121133177","https://openalex.org/W2123820820","https://openalex.org/W2127771326","https://openalex.org/W2139506608","https://openalex.org/W2148432305","https://openalex.org/W2157737097","https://openalex.org/W2158049821","https://openalex.org/W4236944670","https://openalex.org/W4242183123","https://openalex.org/W4250390143","https://openalex.org/W4254263397","https://openalex.org/W6631292417","https://openalex.org/W6637101817","https://openalex.org/W6674477780","https://openalex.org/W6676560735","https://openalex.org/W6680758468"],"related_works":["https://openalex.org/W2071684985","https://openalex.org/W2285351234","https://openalex.org/W1867350216","https://openalex.org/W4247867945","https://openalex.org/W4298004773","https://openalex.org/W4385380367","https://openalex.org/W4388803188","https://openalex.org/W1983910053","https://openalex.org/W4234975527","https://openalex.org/W2965164214"],"abstract_inverted_index":{"Biomolecular":[0],"simulations":[1],"produce":[2],"more":[3],"output":[4],"data":[5,96,104,123],"than":[6],"can":[7,98,170],"be":[8,82,99,162,171],"managed":[9],"effectively":[10],"by":[11],"traditional":[12],"computing":[13],"systems.":[14],"Researchers":[15],"need":[16],"distributed":[17],"systems":[18],"that":[19,50,160,169],"allow":[20],"the":[21,25,31,91,131,136,149],"pooling":[22],"of":[23,27,34,133,138,143,146,182,187],"resources,":[24],"sharing":[26],"simulation":[28,61,147],"data,":[29,148,196],"and":[30,37,57,73,84,101,115,122,127,135,164,173,189,202],"reliable":[32],"publication":[33],"both":[35,119],"tentative":[36],"final":[38,158],"results.":[39],"To":[40,112],"address":[41],"this":[42],"need,":[43],"we":[44],"have":[45,178],"designed":[46],"GEMS,":[47],"a":[48,69,180,185],"system":[49,150],"enables":[51],"biomolecular":[52],"researchers":[53],"to":[54,81,125,153,193,197,203],"store,":[55],"search,":[56],"share":[58,85],"large":[59],"scale":[60],"data.":[62,139],"The":[63],"primary":[64],"design":[65],"problem":[66],"is":[67,151],"striking":[68],"balance":[70,113],"between":[71,155],"generosity":[72,114],"gluttony.":[74],"On":[75,90],"one":[76],"hand,":[77,93],"storage":[78,120,134],"providers":[79,121],"wish":[80],"generous":[83],"resources":[86],"with":[87],"their":[88],"collaborators.":[89],"other":[92],"an":[94],"unchecked":[95],"producer":[97],"gluttonous":[100],"easily":[102],"replicate":[103,198],"unnecessarily":[105],"until":[106],"it":[107],"fills":[108],"all":[109],"available":[110],"space.":[111],"gluttony,":[116],"GEMS":[117,183],"allows":[118],"producers":[124],"state":[126],"enforce":[128],"policies":[129],"on":[130,184],"consumption":[132],"replication":[137],"By":[140],"taking":[141],"advantage":[142],"known":[144],"properties":[145],"able":[152],"distinguish":[154],"high":[156],"value":[157,166],"results":[159,168],"must":[161],"preserved":[163],"low":[165],"intermediate":[167],"deleted":[172],"regenerated":[174],"if":[175],"necessary.":[176],"We":[177],"built":[179],"prototype":[181],"cluster":[186],"workstations":[188],"demonstrate":[190],"its":[191],"ability":[192],"store":[194],"new":[195],"within":[199],"policy":[200],"limits,":[201],"recover":[204],"from":[205],"failures.":[206]},"counts_by_year":[{"year":2013,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
