{"id":"https://openalex.org/W2964876214","doi":"https://doi.org/10.1109/hpcs48598.2019.9188104","title":"Staged deployment of interactive multi-application HPC workflows","display_name":"Staged deployment of interactive multi-application HPC workflows","publication_year":2019,"publication_date":"2019-07-01","ids":{"openalex":"https://openalex.org/W2964876214","doi":"https://doi.org/10.1109/hpcs48598.2019.9188104","mag":"2964876214"},"language":"en","primary_location":{"id":"doi:10.1109/hpcs48598.2019.9188104","is_oa":false,"landing_page_url":"https://doi.org/10.1109/hpcs48598.2019.9188104","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 International Conference on High Performance Computing &amp; Simulation (HPCS)","raw_type":"proceedings-article"},"type":"preprint","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1907.12275","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001402143","display_name":"Wouter Klijn","orcid":"https://orcid.org/0000-0002-8996-488X"},"institutions":[{"id":"https://openalex.org/I171892758","display_name":"Forschungszentrum J\u00fclich","ror":"https://ror.org/02nv7yv05","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I171892758"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Wouter Klijn","raw_affiliation_strings":["SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC), Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH, J\u00fclich, JARA, Germany","Forschungszentrum Julich"],"affiliations":[{"raw_affiliation_string":"SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC), Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH, J\u00fclich, JARA, Germany","institution_ids":["https://openalex.org/I171892758"]},{"raw_affiliation_string":"Forschungszentrum Julich","institution_ids":["https://openalex.org/I171892758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014488498","display_name":"Sandra Diaz-Pier","orcid":"https://orcid.org/0000-0002-3168-5394"},"institutions":[{"id":"https://openalex.org/I171892758","display_name":"Forschungszentrum J\u00fclich","ror":"https://ror.org/02nv7yv05","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I171892758"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Sandra Diaz-Pier","raw_affiliation_strings":["SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC), Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH, J\u00fclich, JARA, Germany","Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH,SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC),J\u00fclich,JARA,Germany,52425"],"affiliations":[{"raw_affiliation_string":"SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC), Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH, J\u00fclich, JARA, Germany","institution_ids":["https://openalex.org/I171892758"]},{"raw_affiliation_string":"Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH,SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC),J\u00fclich,JARA,Germany,52425","institution_ids":["https://openalex.org/I171892758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073083912","display_name":"Abigail Morrison","orcid":"https://orcid.org/0000-0001-6933-797X"},"institutions":[{"id":"https://openalex.org/I171892758","display_name":"Forschungszentrum J\u00fclich","ror":"https://ror.org/02nv7yv05","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I171892758"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Abigail Morrison","raw_affiliation_strings":["SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC), Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH, J\u00fclich, JARA, Germany","Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH,SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC),J\u00fclich,JARA,Germany,52425"],"affiliations":[{"raw_affiliation_string":"SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC), Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH, J\u00fclich, JARA, Germany","institution_ids":["https://openalex.org/I171892758"]},{"raw_affiliation_string":"Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH,SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC),J\u00fclich,JARA,Germany,52425","institution_ids":["https://openalex.org/I171892758"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081751733","display_name":"Alexander Peyser","orcid":"https://orcid.org/0000-0002-3453-310X"},"institutions":[{"id":"https://openalex.org/I171892758","display_name":"Forschungszentrum J\u00fclich","ror":"https://ror.org/02nv7yv05","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I171892758"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alexander Peyser","raw_affiliation_strings":["SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC), Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH, J\u00fclich, JARA, Germany","Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH,SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC),J\u00fclich,JARA,Germany,52425"],"affiliations":[{"raw_affiliation_string":"SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC), Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH, J\u00fclich, JARA, Germany","institution_ids":["https://openalex.org/I171892758"]},{"raw_affiliation_string":"Institute for Advanced Simulation, Forschungszentrum J\u00fclich GmbH,SimLab Neuroscience, J\u00fclich Supercomputing Centre (JSC),J\u00fclich,JARA,Germany,52425","institution_ids":["https://openalex.org/I171892758"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5001402143"],"corresponding_institution_ids":["https://openalex.org/I171892758"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.10803703,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"305","last_page":"311"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.988099992275238,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/software-deployment","display_name":"Software deployment","score":0.8623241782188416},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8557685613632202},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.783118486404419},{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.7160149812698364},{"id":"https://openalex.org/keywords/middleware","display_name":"Middleware (distributed applications)","score":0.587722659111023},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.5456796288490295},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5020976066589355},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.4813400208950043},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.46993881464004517},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.4552146792411804},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.40105491876602173},{"id":"https://openalex.org/keywords/computer-architecture","display_name":"Computer architecture","score":0.36697137355804443},{"id":"https://openalex.org/keywords/systems-engineering","display_name":"Systems engineering","score":0.2733559310436249},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.2328442931175232},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20163369178771973},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.1839589774608612}],"concepts":[{"id":"https://openalex.org/C105339364","wikidata":"https://www.wikidata.org/wiki/Q2297740","display_name":"Software deployment","level":2,"score":0.8623241782188416},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8557685613632202},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.783118486404419},{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.7160149812698364},{"id":"https://openalex.org/C169468491","wikidata":"https://www.wikidata.org/wiki/Q146923","display_name":"Middleware (distributed applications)","level":2,"score":0.587722659111023},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.5456796288490295},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5020976066589355},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.4813400208950043},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.46993881464004517},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.4552146792411804},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.40105491876602173},{"id":"https://openalex.org/C118524514","wikidata":"https://www.wikidata.org/wiki/Q173212","display_name":"Computer architecture","level":1,"score":0.36697137355804443},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.2733559310436249},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.2328442931175232},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20163369178771973},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.1839589774608612},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1109/hpcs48598.2019.9188104","is_oa":false,"landing_page_url":"https://doi.org/10.1109/hpcs48598.2019.9188104","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 International Conference on High Performance Computing &amp; Simulation (HPCS)","raw_type":"proceedings-article"},{"id":"pmh:oai:arXiv.org:1907.12275","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1907.12275","pdf_url":"https://arxiv.org/pdf/1907.12275","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"mag:2964876214","is_oa":true,"landing_page_url":"https://arxiv.org/abs/1907.12275","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.1907.12275","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.1907.12275","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1907.12275","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1907.12275","pdf_url":"https://arxiv.org/pdf/1907.12275","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.6399999856948853,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G1163571418","display_name":null,"funder_award_id":"HBP SGA1","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G398560324","display_name":null,"funder_award_id":"720270","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G4956428346","display_name":null,"funder_award_id":"Horizon 2020 research and innovatio","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5766349579","display_name":null,"funder_award_id":"785907","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8318064016","display_name":null,"funder_award_id":"Horizon","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8681506169","display_name":null,"funder_award_id":"HBP SGA2","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2964876214.pdf","grobid_xml":"https://content.openalex.org/works/W2964876214.grobid-xml"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W1531160357","https://openalex.org/W1604669054","https://openalex.org/W1881092091","https://openalex.org/W1904815815","https://openalex.org/W2010639459","https://openalex.org/W2069552454","https://openalex.org/W2129666400","https://openalex.org/W2145749918","https://openalex.org/W2154497431","https://openalex.org/W2159951683","https://openalex.org/W2165586822","https://openalex.org/W2316327132","https://openalex.org/W2336242821","https://openalex.org/W2358431938","https://openalex.org/W2491198319","https://openalex.org/W2548021123","https://openalex.org/W2572857085","https://openalex.org/W2587995914","https://openalex.org/W2612407712","https://openalex.org/W2733178697","https://openalex.org/W2766252405","https://openalex.org/W2783877559","https://openalex.org/W2912474515","https://openalex.org/W2914110683","https://openalex.org/W2952545116","https://openalex.org/W2963919096","https://openalex.org/W3098305353","https://openalex.org/W3139487518","https://openalex.org/W4251686894","https://openalex.org/W6639756506","https://openalex.org/W6696620539"],"related_works":["https://openalex.org/W3084337977","https://openalex.org/W2993459617","https://openalex.org/W3210852396","https://openalex.org/W2759210073","https://openalex.org/W2801412600","https://openalex.org/W2491059649","https://openalex.org/W2156705010","https://openalex.org/W2962945219","https://openalex.org/W3033211876","https://openalex.org/W2351740240","https://openalex.org/W2805645875","https://openalex.org/W2903692197","https://openalex.org/W2526803421","https://openalex.org/W2131878791","https://openalex.org/W2154461201","https://openalex.org/W2766766128","https://openalex.org/W2979639293","https://openalex.org/W2993287145","https://openalex.org/W1985056110","https://openalex.org/W3165027330"],"abstract_inverted_index":{"Running":[0],"scientific":[1,13],"workflows":[2,148],"on":[3,31,80,87,150],"a":[4,8,12,21,42,58,78,106,114,117,123,139],"supercomputer":[5],"can":[6],"be":[7],"daunting":[9],"task":[10],"for":[11,24,41,143],"domain":[14],"specialist.":[15],"Workflow":[16],"management":[17],"solutions":[18,53],"(WMS)":[19],"are":[20],"standard":[22],"method":[23],"reducing":[25,156],"the":[26,39,49,67,74,127,133,157],"complexity":[27,158],"of":[28,69,126,159],"application":[29],"deployment":[30,160],"high":[32],"performance":[33],"computing":[34],"(HPC)":[35],"infrastructure.":[36],"We":[37,121,136],"introduce":[38],"design":[40,65],"middleware":[43],"system":[44],"that":[45],"extends":[46],"and":[47,104,161],"combines":[48],"functionality":[50],"from":[51],"existing":[52],"in":[54,73,130],"order":[55],"to":[56],"create":[57],"high-level,":[59],"staged":[60],"usercentric":[61],"operation/deployment":[62],"model.":[63],"This":[64],"addresses":[66],"requirements":[68],"several":[70],"use":[71,89],"cases":[72],"life":[75],"sciences,":[76],"with":[77,101,116,132],"focus":[79,86],"neuroscience.":[81],"In":[82],"this":[83],"manuscript":[84],"we":[85],"two":[88],"cases:":[90],"1)":[91],"three":[92,97],"coupled":[93],"neuronal":[94],"simulators":[95],"(for":[96],"different":[98],"space/time":[99],"scales)":[100],"in-transit":[102],"visualization":[103],"2)":[105],"closed-loop":[107],"workflow":[108],"optimized":[109],"by":[110],"machine":[111],"learning,":[112],"coupling":[113],"robot":[115],"neural":[118],"network":[119],"simulation.":[120],"provide":[122],"detailed":[124],"overview":[125],"application-integrated":[128],"monitoring":[129],"relationship":[131],"HPC":[134,151],"job.":[135],"present":[137],"here":[138],"novel":[140],"usage":[141],"model":[142],"large":[144],"scale":[145],"interactive":[146],"multi-application":[147],"running":[149],"systems":[152],"which":[153],"aims":[154],"at":[155],"execution,":[162],"thus":[163],"enabling":[164],"new":[165],"science.":[166]},"counts_by_year":[],"updated_date":"2026-03-11T14:59:36.786465","created_date":"2025-10-10T00:00:00"}
