{"id":"https://openalex.org/W1995297116","doi":"https://doi.org/10.1109/grc.2005.1547229","title":"A semantic-based approach for mining undiscovered public knowledge from biomedical literature","display_name":"A semantic-based approach for mining undiscovered public knowledge from biomedical literature","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1995297116","doi":"https://doi.org/10.1109/grc.2005.1547229","mag":"1995297116"},"language":"en","primary_location":{"id":"doi:10.1109/grc.2005.1547229","is_oa":false,"landing_page_url":"https://doi.org/10.1109/grc.2005.1547229","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2005 IEEE International Conference on Granular Computing","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101569677","display_name":"Xiaohua Hu","orcid":"https://orcid.org/0000-0001-6942-490X"},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Xiaohua Hu","raw_affiliation_strings":["College of Information Science and Technology, Drexel University, Philadelphia, PA, USA","College of Information Science & Technology, Drexel University, Philadelphia, PA, USA"],"affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Drexel University, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I72816309"]},{"raw_affiliation_string":"College of Information Science & Technology, Drexel University, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I72816309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100357446","display_name":"Guangrong Li","orcid":"https://orcid.org/0000-0002-8425-0212"},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guangrong Li","raw_affiliation_strings":["College of Information Science and Technology, Drexel University, Philadelphia, PA, USA","College of Information Science & Technology, Drexel University, Philadelphia, PA, USA"],"affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Drexel University, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I72816309"]},{"raw_affiliation_string":"College of Information Science & Technology, Drexel University, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I72816309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011662726","display_name":"Illhoi Yoo","orcid":"https://orcid.org/0000-0003-2536-3660"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"I. Yoo","raw_affiliation_strings":["College of Accounting, Huan University, Changsha, Hunan, China","[College of Accounting, Huan University, Changsha, Hunan, China]"],"affiliations":[{"raw_affiliation_string":"College of Accounting, Huan University, Changsha, Hunan, China","institution_ids":[]},{"raw_affiliation_string":"[College of Accounting, Huan University, Changsha, Hunan, China]","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100356742","display_name":"Xiaodan Zhang","orcid":"https://orcid.org/0000-0001-7002-5447"},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaodan Zhang","raw_affiliation_strings":["College of Information Science and Technology, Drexel University, Philadelphia, PA, USA","College of Information Science & Technology, Drexel University, Philadelphia, PA, USA"],"affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Drexel University, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I72816309"]},{"raw_affiliation_string":"College of Information Science & Technology, Drexel University, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I72816309"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018204928","display_name":"Xuheng Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xuheng Xu","raw_affiliation_strings":["College of Information Science and Technology, Drexel University, Philadelphia, PA, USA","College of Information Science & Technology, Drexel University, Philadelphia, PA, USA"],"affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Drexel University, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I72816309"]},{"raw_affiliation_string":"College of Information Science & Technology, Drexel University, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I72816309"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101569677"],"corresponding_institution_ids":["https://openalex.org/I72816309"],"apc_list":null,"apc_paid":null,"fwci":0.39670704,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.55999936,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"22","last_page":"27 Vol. 1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12881","display_name":"linguistics and terminology studies","score":0.9628000259399414,"subfield":{"id":"https://openalex.org/subfields/1203","display_name":"Language and Linguistics"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7232451438903809},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5049808621406555},{"id":"https://openalex.org/keywords/unified-medical-language-system","display_name":"Unified Medical Language System","score":0.483447402715683},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.46512293815612793},{"id":"https://openalex.org/keywords/semantic-search","display_name":"Semantic search","score":0.43198639154434204},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.42836183309555054},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.41575106978416443},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.3385867476463318},{"id":"https://openalex.org/keywords/social-semantic-web","display_name":"Social Semantic Web","score":0.23489820957183838},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.20631438493728638},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.14622396230697632}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7232451438903809},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5049808621406555},{"id":"https://openalex.org/C69505689","wikidata":"https://www.wikidata.org/wiki/Q455338","display_name":"Unified Medical Language System","level":2,"score":0.483447402715683},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.46512293815612793},{"id":"https://openalex.org/C166423231","wikidata":"https://www.wikidata.org/wiki/Q1891170","display_name":"Semantic search","level":3,"score":0.43198639154434204},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.42836183309555054},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.41575106978416443},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.3385867476463318},{"id":"https://openalex.org/C534406577","wikidata":"https://www.wikidata.org/wiki/Q7550843","display_name":"Social Semantic Web","level":3,"score":0.23489820957183838},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.20631438493728638},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.14622396230697632},{"id":"https://openalex.org/C50382505","wikidata":"https://www.wikidata.org/wiki/Q2553356","display_name":"OWL-S","level":4,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/grc.2005.1547229","is_oa":false,"landing_page_url":"https://doi.org/10.1109/grc.2005.1547229","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2005 IEEE International Conference on Granular Computing","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/14","score":0.46000000834465027,"display_name":"Life below water"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1553011358","https://openalex.org/W1553696291","https://openalex.org/W1741748490","https://openalex.org/W1976909068","https://openalex.org/W2011726136","https://openalex.org/W2015954361","https://openalex.org/W2024030746","https://openalex.org/W2038316408","https://openalex.org/W2054473834","https://openalex.org/W2067096102","https://openalex.org/W2087035995","https://openalex.org/W2156504814","https://openalex.org/W2462153862","https://openalex.org/W4239389735","https://openalex.org/W6633402183","https://openalex.org/W6637492507","https://openalex.org/W6719055546"],"related_works":["https://openalex.org/W2064177607","https://openalex.org/W1801798365","https://openalex.org/W2122194007","https://openalex.org/W2157272674","https://openalex.org/W2103987857","https://openalex.org/W2031284285","https://openalex.org/W2068800403","https://openalex.org/W116469150","https://openalex.org/W2914601452","https://openalex.org/W1979553193"],"abstract_inverted_index":{"The":[0,51],"problem":[1],"of":[2,55,65,95],"mining":[3,44],"undiscovered":[4,31,45],"public":[5,32,46],"knowledge":[6,33,47],"from":[7,34,48,106],"biomedical":[8,35,49,57,86,97],"literature":[9],"was":[10],"exemplified":[11],"by":[12],"Swanson's":[13,120],"pioneering":[14],"work":[15],"on":[16],"Raynaud":[17,124],"disease/fish-oil":[18],"discovery":[19,154],"in":[20,84,152],"1986.":[21],"Since":[22],"then,":[23],"there":[24],"have":[25],"been":[26],"many":[27],"approaches":[28],"to":[29,79],"mine":[30],"literature.":[36,50,87],"This":[37],"paper":[38],"presents":[39],"a":[40],"semantic-based":[41],"approach":[42],"for":[43],"method":[52,134],"takes":[53],"advantages":[54],"the":[56,63,85,89,96,102,110,153],"ontologies,":[58],"MeSH":[59],"and":[60,92,108,127],"UMLS,":[61],"as":[62],"source":[64],"semantic":[66,90,93],"knowledge.":[67],"A":[68],"prototype":[69],"system":[70],"Biomedical":[71],"Semantic-based":[72],"Knowledge":[73],"Discovery":[74],"System":[75],"(Bio-SbKDS)":[76],"is":[77],"designed":[78],"uncover":[80],"novel":[81,111,145],"hypothesis/connections":[82],"hidden":[83],"Using":[88],"types":[91],"relations":[94],"concepts,":[98],"Bio-SbKDS":[99,116],"can":[100],"identify":[101],"relevant":[103,144],"concepts":[104],"collected":[105],"Medline":[107],"generate":[109],"hypothesis":[112],"between":[113],"these":[114],"concepts.":[115],"successfully":[117],"replicates":[118],"Dr.":[119],"two":[121],"famous":[122],"discoveries:":[123],"disease/fish":[125],"oil":[126],"migraine/magnesium.":[128],"Compared":[129],"with":[130],"previous":[131],"approaches,":[132],"our":[133],"searches":[135],"much":[136,140,148],"less":[137,141,149],"articles,":[138],"generates":[139],"but":[142],"more":[143],"hypotheses,":[146],"requires":[147],"human":[150],"intervention":[151],"procedure.":[155]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
