{"id":"https://openalex.org/W1970924890","doi":"https://doi.org/10.1109/gensips.2012.6507739","title":"An investigation of clinical outcome prediction from integrative genomic profiles in ovarian cancer","display_name":"An investigation of clinical outcome prediction from integrative genomic profiles in ovarian cancer","publication_year":2012,"publication_date":"2012-12-01","ids":{"openalex":"https://openalex.org/W1970924890","doi":"https://doi.org/10.1109/gensips.2012.6507739","mag":"1970924890"},"language":"en","primary_location":{"id":"doi:10.1109/gensips.2012.6507739","is_oa":false,"landing_page_url":"https://doi.org/10.1109/gensips.2012.6507739","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings 2012 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066085701","display_name":"Lin Zhang","orcid":"https://orcid.org/0000-0002-5140-1096"},"institutions":[{"id":"https://openalex.org/I25757504","display_name":"China University of Mining and Technology","ror":"https://ror.org/01xt2dr21","country_code":"CN","type":"education","lineage":["https://openalex.org/I25757504"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lin Zhang","raw_affiliation_strings":["School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, Jiangsu, China","School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, Jiangsu, P.R. China#TAB#"],"affiliations":[{"raw_affiliation_string":"School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, Jiangsu, China","institution_ids":["https://openalex.org/I25757504"]},{"raw_affiliation_string":"School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, Jiangsu, P.R. China#TAB#","institution_ids":["https://openalex.org/I25757504"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101520987","display_name":"Hui Liu","orcid":"https://orcid.org/0000-0002-0462-1256"},"institutions":[{"id":"https://openalex.org/I25757504","display_name":"China University of Mining and Technology","ror":"https://ror.org/01xt2dr21","country_code":"CN","type":"education","lineage":["https://openalex.org/I25757504"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hui Liu","raw_affiliation_strings":["School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, Jiangsu, China","School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, Jiangsu, P.R. China#TAB#"],"affiliations":[{"raw_affiliation_string":"School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, Jiangsu, China","institution_ids":["https://openalex.org/I25757504"]},{"raw_affiliation_string":"School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, Jiangsu, P.R. China#TAB#","institution_ids":["https://openalex.org/I25757504"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102940992","display_name":"Tzu\u2010Hung Hsiao","orcid":"https://orcid.org/0000-0003-0365-9970"},"institutions":[{"id":"https://openalex.org/I165951966","display_name":"The University of Texas Health Science Center at San Antonio","ror":"https://ror.org/02f6dcw23","country_code":"US","type":"education","lineage":["https://openalex.org/I165951966"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tzu-Hung Hsiao","raw_affiliation_strings":["Greehey Childrens Cancer Research Institute, Department of Epidemiology and BioStatistics, University of Texas Health Science Center, San Antonio, USA","Greehey Children's Cancer Research Institute, Dept. of Epidemiology and Biostat., Univ. of Texas Health Science Center San Antonio, USA"],"affiliations":[{"raw_affiliation_string":"Greehey Childrens Cancer Research Institute, Department of Epidemiology and BioStatistics, University of Texas Health Science Center, San Antonio, USA","institution_ids":["https://openalex.org/I165951966"]},{"raw_affiliation_string":"Greehey Children's Cancer Research Institute, Dept. of Epidemiology and Biostat., Univ. of Texas Health Science Center San Antonio, USA","institution_ids":["https://openalex.org/I165951966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100689062","display_name":"Yidong Chen","orcid":"https://orcid.org/0000-0002-2627-5016"},"institutions":[{"id":"https://openalex.org/I165951966","display_name":"The University of Texas Health Science Center at San Antonio","ror":"https://ror.org/02f6dcw23","country_code":"US","type":"education","lineage":["https://openalex.org/I165951966"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yidong Chen","raw_affiliation_strings":["Greehey Childrens Cancer Research Institute, Department of Epidemiology and BioStatistics, University of Texas Health Science Center, San Antonio, USA","Greehey Children's Cancer Research Institute, Dept. of Epidemiology and Biostat., Univ. of Texas Health Science Center San Antonio, USA"],"affiliations":[{"raw_affiliation_string":"Greehey Childrens Cancer Research Institute, Department of Epidemiology and BioStatistics, University of Texas Health Science Center, San Antonio, USA","institution_ids":["https://openalex.org/I165951966"]},{"raw_affiliation_string":"Greehey Children's Cancer Research Institute, Dept. of Epidemiology and Biostat., Univ. of Texas Health Science Center San Antonio, USA","institution_ids":["https://openalex.org/I165951966"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068887242","display_name":"Yufei Huang","orcid":"https://orcid.org/0000-0001-6268-5357"},"institutions":[{"id":"https://openalex.org/I45438204","display_name":"The University of Texas at San Antonio","ror":"https://ror.org/01kd65564","country_code":"US","type":"education","lineage":["https://openalex.org/I45438204"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yufei Huang","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Texas, San Antonio, San Antonio, USA","Department of Electrical and Computer Engineering, University of Texas at San Antonio,San Antonio,USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Texas, San Antonio, San Antonio, USA","institution_ids":["https://openalex.org/I45438204"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Texas at San Antonio,San Antonio,USA","institution_ids":["https://openalex.org/I45438204"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5066085701"],"corresponding_institution_ids":["https://openalex.org/I25757504"],"apc_list":null,"apc_paid":null,"fwci":0.4465,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.6688403,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"2","issue":null,"first_page":"103","last_page":"106"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.6691076755523682},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.5308682918548584},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4915054738521576},{"id":"https://openalex.org/keywords/methylation","display_name":"Methylation","score":0.48580002784729004},{"id":"https://openalex.org/keywords/principal-component-analysis","display_name":"Principal component analysis","score":0.4852606952190399},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4753560721874237},{"id":"https://openalex.org/keywords/cpg-site","display_name":"CpG site","score":0.45521068572998047},{"id":"https://openalex.org/keywords/outcome","display_name":"Outcome (game theory)","score":0.44557854533195496},{"id":"https://openalex.org/keywords/ovarian-cancer","display_name":"Ovarian cancer","score":0.4213706851005554},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.403773695230484},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4014433026313782},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.36565619707107544},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.33512452244758606},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3337392210960388},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.26921021938323975},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.18112581968307495},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12000730633735657}],"concepts":[{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.6691076755523682},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.5308682918548584},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4915054738521576},{"id":"https://openalex.org/C33288867","wikidata":"https://www.wikidata.org/wiki/Q518328","display_name":"Methylation","level":3,"score":0.48580002784729004},{"id":"https://openalex.org/C27438332","wikidata":"https://www.wikidata.org/wiki/Q2873","display_name":"Principal component analysis","level":2,"score":0.4852606952190399},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4753560721874237},{"id":"https://openalex.org/C140173407","wikidata":"https://www.wikidata.org/wiki/Q1138358","display_name":"CpG site","level":5,"score":0.45521068572998047},{"id":"https://openalex.org/C148220186","wikidata":"https://www.wikidata.org/wiki/Q7111912","display_name":"Outcome (game theory)","level":2,"score":0.44557854533195496},{"id":"https://openalex.org/C2780427987","wikidata":"https://www.wikidata.org/wiki/Q172341","display_name":"Ovarian cancer","level":3,"score":0.4213706851005554},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.403773695230484},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4014433026313782},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.36565619707107544},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33512452244758606},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3337392210960388},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.26921021938323975},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18112581968307495},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12000730633735657},{"id":"https://openalex.org/C144237770","wikidata":"https://www.wikidata.org/wiki/Q747534","display_name":"Mathematical economics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/gensips.2012.6507739","is_oa":false,"landing_page_url":"https://doi.org/10.1109/gensips.2012.6507739","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings 2012 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.7900000214576721,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1997840761","https://openalex.org/W1998554580","https://openalex.org/W2002937977","https://openalex.org/W2005388951","https://openalex.org/W2018116321","https://openalex.org/W2056040742","https://openalex.org/W2078864580","https://openalex.org/W2100438487","https://openalex.org/W2104989537","https://openalex.org/W2122825543","https://openalex.org/W2123696077","https://openalex.org/W2135046866","https://openalex.org/W2158734599","https://openalex.org/W4399582985","https://openalex.org/W6675558802","https://openalex.org/W6868925584"],"related_works":["https://openalex.org/W2169344098","https://openalex.org/W2944524138","https://openalex.org/W2364944693","https://openalex.org/W2123238153","https://openalex.org/W2582088144","https://openalex.org/W4200236841","https://openalex.org/W3029570287","https://openalex.org/W2380976670","https://openalex.org/W4210559607","https://openalex.org/W2381482069"],"abstract_inverted_index":{"Integrative":[0],"clinical":[1,86],"outcome":[2],"prediction":[3,115],"models":[4,24,31],"that":[5,25,109],"combines":[6],"gene":[7,48,121],"expression":[8,49,78,122],"and":[9,23,36,50,69],"methylation":[10,51,82],"profiles":[11,52],"are":[12],"investigated":[13,63],"in":[14,17,97],"this":[15,98],"paper":[16],"order":[18],"to":[19,46,74,84,100],"reveal":[20],"genomic":[21],"features":[22],"bear":[26],"important":[27],"prognostic":[28],"value.":[29],"The":[30,105],"all":[32],"include":[33],"the":[34,41,56,65,70,85,102,110,114],"integration":[35,42],"feature":[37,57],"selection":[38,58],"steps.":[39],"In":[40,55],"step,":[43,59],"a":[44],"method":[45,73],"combine":[47],"is":[53],"introduced.":[54],"several":[60],"approaches":[61],"were":[62],"including":[64],"supervised":[66],"principal":[67],"component":[68],"elastic":[71],"net":[72],"identify":[75],"genes,":[76],"whose":[77],"or":[79],"associate":[80],"CpG":[81],"contribute":[83],"outcome.":[87],"A":[88],"set":[89],"of":[90],"87":[91],"ovarian":[92],"cancer":[93],"patients":[94],"was":[95],"used":[96],"study":[99],"evaluate":[101],"proposed":[103],"methods.":[104],"test":[106],"results":[107],"showed":[108],"integrative":[111],"methods":[112],"improved":[113],"performance":[116],"over":[117],"those":[118],"based":[119],"on":[120],"alone.":[123]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
