{"id":"https://openalex.org/W2061230807","doi":"https://doi.org/10.1109/gensips.2009.5174338","title":"Towards the reconstruction of Brassica napus seed development FA metabolism dynamic regulatory map","display_name":"Towards the reconstruction of Brassica napus seed development FA metabolism dynamic regulatory map","publication_year":2009,"publication_date":"2009-05-01","ids":{"openalex":"https://openalex.org/W2061230807","doi":"https://doi.org/10.1109/gensips.2009.5174338","mag":"2061230807"},"language":"en","primary_location":{"id":"doi:10.1109/gensips.2009.5174338","is_oa":false,"landing_page_url":"https://doi.org/10.1109/gensips.2009.5174338","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 IEEE International Workshop on Genomic Signal Processing and Statistics","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://nrc-publications.canada.ca/eng/view/accepted/?id=475fa014-e64e-419f-888e-67e34ba45ece","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066354389","display_name":"Alain Tchagang","orcid":"https://orcid.org/0000-0001-8619-9441"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alain Tchagang","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","institution_ids":[]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014506447","display_name":"Hugo B\u00e9rub\u00e9","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hugo Berube","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","institution_ids":[]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033923794","display_name":"Ziying Liu","orcid":"https://orcid.org/0000-0001-7821-6723"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ziying Liu","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","institution_ids":[]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113496151","display_name":"Sieu Phan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sieu Phan","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","institution_ids":[]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014709314","display_name":"Fazel Famili","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Fazel Famili","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","institution_ids":[]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019868633","display_name":"Youlian Pan","orcid":"https://orcid.org/0000-0002-0158-0081"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Youlian Pan","raw_affiliation_strings":["Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, Ottawa, ONT, Canada","institution_ids":[]},{"raw_affiliation_string":"Knowledge Discovery Group, Institute for Information Technology, NRC 1200 Montreal Road, Ottawa, ON K1A 0R6, Canada","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0979021,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"7","issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11844","display_name":"Lipid metabolism and biosynthesis","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1303","display_name":"Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11844","display_name":"Lipid metabolism and biosynthesis","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1303","display_name":"Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12566","display_name":"Nitrogen and Sulfur Effects on Brassica","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10303","display_name":"Photosynthetic Processes and Mechanisms","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/canola","display_name":"Canola","score":0.9339016675949097},{"id":"https://openalex.org/keywords/brassica","display_name":"Brassica","score":0.8945886492729187},{"id":"https://openalex.org/keywords/biotechnology","display_name":"Biotechnology","score":0.44964468479156494},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4036295413970947},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4023788273334503},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.33905014395713806},{"id":"https://openalex.org/keywords/agronomy","display_name":"Agronomy","score":0.25361236929893494}],"concepts":[{"id":"https://openalex.org/C2779223168","wikidata":"https://www.wikidata.org/wiki/Q98841400","display_name":"Canola","level":2,"score":0.9339016675949097},{"id":"https://openalex.org/C2776747608","wikidata":"https://www.wikidata.org/wiki/Q58677","display_name":"Brassica","level":2,"score":0.8945886492729187},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.44964468479156494},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4036295413970947},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4023788273334503},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.33905014395713806},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.25361236929893494}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/gensips.2009.5174338","is_oa":false,"landing_page_url":"https://doi.org/10.1109/gensips.2009.5174338","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 IEEE International Workshop on Genomic Signal Processing and Statistics","raw_type":"proceedings-article"},{"id":"pmh:oai:cisti-icist.nrc-cnrc.ca:cistinparc:16457850","is_oa":true,"landing_page_url":"https://nrc-publications.canada.ca/eng/view/object/?id=475fa014-e64e-419f-888e-67e34ba45ece","pdf_url":"https://nrc-publications.canada.ca/eng/view/accepted/?id=475fa014-e64e-419f-888e-67e34ba45ece","source":{"id":"https://openalex.org/S7407055245","display_name":"NPARC","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.987.2024","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.987.2024","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://www.researchgate.net/profile/Youlian_Pan/publication/224806770_Towards_the_reconstruction_of_Brassica_napus_seed_development_FA_metabolism_dynamic_regulatory_map/links/0c9605272659170413000000.pdf","raw_type":"text"}],"best_oa_location":{"id":"pmh:oai:cisti-icist.nrc-cnrc.ca:cistinparc:16457850","is_oa":true,"landing_page_url":"https://nrc-publications.canada.ca/eng/view/object/?id=475fa014-e64e-419f-888e-67e34ba45ece","pdf_url":"https://nrc-publications.canada.ca/eng/view/accepted/?id=475fa014-e64e-419f-888e-67e34ba45ece","source":{"id":"https://openalex.org/S7407055245","display_name":"NPARC","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production","score":0.4099999964237213}],"awards":[],"funders":[{"id":"https://openalex.org/F4320334601","display_name":"National Research Council Canada","ror":"https://ror.org/04mte1k06"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2061230807.pdf","grobid_xml":"https://content.openalex.org/works/W2061230807.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W1955382403","https://openalex.org/W1966910649","https://openalex.org/W1972132893","https://openalex.org/W2001781083","https://openalex.org/W2009001778","https://openalex.org/W2040078492","https://openalex.org/W2081468394","https://openalex.org/W2085675271","https://openalex.org/W2086877758","https://openalex.org/W2098846873","https://openalex.org/W2103043453","https://openalex.org/W2116382358","https://openalex.org/W2153677263","https://openalex.org/W2161523118","https://openalex.org/W6684042573"],"related_works":["https://openalex.org/W1529086241","https://openalex.org/W2731149104","https://openalex.org/W2763540542","https://openalex.org/W1864140583","https://openalex.org/W1939658841","https://openalex.org/W2006878572","https://openalex.org/W2464707851","https://openalex.org/W3187619133","https://openalex.org/W2137715090","https://openalex.org/W2305200808"],"abstract_inverted_index":{"The":[0],"increasing":[1],"demand":[2],"for":[3,7,123,145],"canola":[4,34],"(Brassica":[5],"napus)":[6],"both":[8],"food":[9],"(e.g.":[10,15],"vegetable":[11],"oil)":[12],"and":[13,55,74,84,129,137],"non-food":[14],"biofuel)":[16],"applications":[17],"presents":[18],"significant":[19],"socio-economic":[20],"benefits.":[21],"While":[22],"genetic":[23,146],"engineering":[24],"offers":[25],"great":[26],"potential":[27,120,143],"to":[28,62,97,119],"speed":[29],"up":[30],"the":[31,45,101],"process":[32],"of":[33,44,68,79,100,104,148],"improvement,":[35],"such":[36],"an":[37],"effort":[38],"relies":[39],"on":[40],"a":[41,59,63,75,90],"good":[42],"understanding":[43],"molecular":[46],"mechanisms":[47],"underlying":[48],"seed":[49,72,135],"development,":[50,73],"fatty":[51],"acid":[52],"(FA)":[53],"metabolism,":[54],"oil":[56,149],"content.":[57],"Applying":[58],"well-defined":[60],"algorithm":[61],"time-series":[64],"gene":[65],"expression":[66],"dataset":[67,78],"B.":[69,133],"napus":[70,134],"during":[71],"well":[76],"selected":[77],"interactions":[80],"between":[81],"transcription":[82],"factors":[83],"their":[85],"target":[86],"genes,":[87,141],"we":[88],"derive":[89],"dynamic":[91],"regulatory":[92],"map":[93],"that":[94],"is":[95],"able":[96],"recover":[98],"many":[99],"known":[102],"aspects":[103],"these":[105],"responses.":[106],"Predictions":[107],"made":[108],"in":[109,131],"this":[110],"study":[111],"are":[112],"further":[113],"validated":[114],"through":[115],"literature":[116],"search,":[117],"leading":[118],"new":[121],"roles":[122],"LEC1,":[124],"LEC2,":[125],"WRI1,":[126],"FUS3,":[127],"MYB30,":[128],"ABI3":[130],"controlling":[132],"development":[136],"FA":[138],"metabolism":[139],"related":[140],"thus":[142],"targets":[144],"improvement":[147],"production.":[150]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}