{"id":"https://openalex.org/W2075923892","doi":"https://doi.org/10.1109/gce.2014.10","title":"The Arabidopsis Information Portal: An Application Platform for Data Discovery","display_name":"The Arabidopsis Information Portal: An Application Platform for Data Discovery","publication_year":2014,"publication_date":"2014-11-01","ids":{"openalex":"https://openalex.org/W2075923892","doi":"https://doi.org/10.1109/gce.2014.10","mag":"2075923892"},"language":"en","primary_location":{"id":"doi:10.1109/gce.2014.10","is_oa":false,"landing_page_url":"https://doi.org/10.1109/gce.2014.10","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 9th Gateway Computing Environments Workshop","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041108049","display_name":"Matthew Hanlon","orcid":"https://orcid.org/0000-0003-1851-4862"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Matthew R Hanlon","raw_affiliation_strings":["Texas Advanced Computing Center, The University of Texas at Austin","The University of Texas, at Austin"],"affiliations":[{"raw_affiliation_string":"Texas Advanced Computing Center, The University of Texas at Austin","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"The University of Texas, at Austin","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020010821","display_name":"Matthew Vaughn","orcid":"https://orcid.org/0000-0002-1384-4283"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Vaughn","raw_affiliation_strings":["Texas Advanced Computing Center, The University of Texas at Austin","The University of Texas, at Austin"],"affiliations":[{"raw_affiliation_string":"Texas Advanced Computing Center, The University of Texas at Austin","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"The University of Texas, at Austin","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112656562","display_name":"Stephen Mock","orcid":null},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephen Mock","raw_affiliation_strings":["Texas Advanced Computing Center, The University of Texas at Austin","The University of Texas, at Austin"],"affiliations":[{"raw_affiliation_string":"Texas Advanced Computing Center, The University of Texas at Austin","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"The University of Texas, at Austin","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056338420","display_name":"Rion Dooley","orcid":"https://orcid.org/0000-0002-3807-6647"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rion Dooley","raw_affiliation_strings":["Texas Advanced Computing Center, The University of Texas at Austin","The University of Texas, at Austin"],"affiliations":[{"raw_affiliation_string":"Texas Advanced Computing Center, The University of Texas at Austin","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"The University of Texas, at Austin","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046098158","display_name":"W\u00e1lter Moreira","orcid":"https://orcid.org/0000-0001-9454-441X"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Walter Moreira","raw_affiliation_strings":["Texas Advanced Computing Center, The University of Texas at Austin","The University of Texas, at Austin"],"affiliations":[{"raw_affiliation_string":"Texas Advanced Computing Center, The University of Texas at Austin","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"The University of Texas, at Austin","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002759577","display_name":"Joe Stubbs","orcid":"https://orcid.org/0000-0002-8644-0300"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joe Stubbs","raw_affiliation_strings":["Texas Advanced Computing Center, The University of Texas at Austin","The University of Texas, at Austin"],"affiliations":[{"raw_affiliation_string":"Texas Advanced Computing Center, The University of Texas at Austin","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"The University of Texas, at Austin","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108517259","display_name":"Chris Town","orcid":null},"institutions":[{"id":"https://openalex.org/I1301553790","display_name":"J. Craig Venter Institute","ror":"https://ror.org/049r1ts75","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1301553790"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris Town","raw_affiliation_strings":["J. Craig Venter Institute","J. Craig Venter Institute|"],"affiliations":[{"raw_affiliation_string":"J. Craig Venter Institute","institution_ids":["https://openalex.org/I1301553790"]},{"raw_affiliation_string":"J. Craig Venter Institute|","institution_ids":["https://openalex.org/I1301553790"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072509066","display_name":"Jason Miller","orcid":"https://orcid.org/0000-0002-6912-2925"},"institutions":[{"id":"https://openalex.org/I1301553790","display_name":"J. Craig Venter Institute","ror":"https://ror.org/049r1ts75","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1301553790"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jason Miller","raw_affiliation_strings":["J. Craig Venter Institute","J. Craig Venter Institute|"],"affiliations":[{"raw_affiliation_string":"J. Craig Venter Institute","institution_ids":["https://openalex.org/I1301553790"]},{"raw_affiliation_string":"J. Craig Venter Institute|","institution_ids":["https://openalex.org/I1301553790"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069527016","display_name":"Vivek Krishnakumar","orcid":"https://orcid.org/0000-0002-5227-0200"},"institutions":[{"id":"https://openalex.org/I1301553790","display_name":"J. Craig Venter Institute","ror":"https://ror.org/049r1ts75","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1301553790"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vivek Krishnakumar","raw_affiliation_strings":["J. Craig Venter Institute","J. Craig Venter Institute|"],"affiliations":[{"raw_affiliation_string":"J. Craig Venter Institute","institution_ids":["https://openalex.org/I1301553790"]},{"raw_affiliation_string":"J. Craig Venter Institute|","institution_ids":["https://openalex.org/I1301553790"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090195616","display_name":"Erik Ferlanti","orcid":"https://orcid.org/0000-0001-5128-1584"},"institutions":[{"id":"https://openalex.org/I1301553790","display_name":"J. Craig Venter Institute","ror":"https://ror.org/049r1ts75","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1301553790"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Erik Ferlanti","raw_affiliation_strings":["J. Craig Venter Institute","J. Craig Venter Institute|"],"affiliations":[{"raw_affiliation_string":"J. Craig Venter Institute","institution_ids":["https://openalex.org/I1301553790"]},{"raw_affiliation_string":"J. Craig Venter Institute|","institution_ids":["https://openalex.org/I1301553790"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089041111","display_name":"Eleanor Pence","orcid":null},"institutions":[{"id":"https://openalex.org/I1301553790","display_name":"J. Craig Venter Institute","ror":"https://ror.org/049r1ts75","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1301553790"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eleanor Pence","raw_affiliation_strings":["J. Craig Venter Institute","J. Craig Venter Institute|"],"affiliations":[{"raw_affiliation_string":"J. Craig Venter Institute","institution_ids":["https://openalex.org/I1301553790"]},{"raw_affiliation_string":"J. Craig Venter Institute|","institution_ids":["https://openalex.org/I1301553790"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5041108049"],"corresponding_institution_ids":["https://openalex.org/I86519309"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.17421579,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"24","issue":null,"first_page":"38","last_page":"41"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9495999813079834,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10317","display_name":"Advanced Database Systems and Queries","score":0.9462000131607056,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workspace","display_name":"Workspace","score":0.7617731094360352},{"id":"https://openalex.org/keywords/software-deployment","display_name":"Software deployment","score":0.6398160457611084},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6380711793899536},{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.500985860824585},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.4840242564678192},{"id":"https://openalex.org/keywords/general-partnership","display_name":"General partnership","score":0.4600076973438263},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4167799651622772},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.38237273693084717},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3654639720916748},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3570728003978729},{"id":"https://openalex.org/keywords/systems-engineering","display_name":"Systems engineering","score":0.3568398952484131},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.23821395635604858},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10180985927581787},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.09881559014320374},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09010085463523865}],"concepts":[{"id":"https://openalex.org/C58581272","wikidata":"https://www.wikidata.org/wiki/Q12741163","display_name":"Workspace","level":3,"score":0.7617731094360352},{"id":"https://openalex.org/C105339364","wikidata":"https://www.wikidata.org/wiki/Q2297740","display_name":"Software deployment","level":2,"score":0.6398160457611084},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6380711793899536},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.500985860824585},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.4840242564678192},{"id":"https://openalex.org/C71750763","wikidata":"https://www.wikidata.org/wiki/Q646164","display_name":"General partnership","level":2,"score":0.4600076973438263},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4167799651622772},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.38237273693084717},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3654639720916748},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3570728003978729},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.3568398952484131},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.23821395635604858},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10180985927581787},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.09881559014320374},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09010085463523865},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C90509273","wikidata":"https://www.wikidata.org/wiki/Q11012","display_name":"Robot","level":2,"score":0.0},{"id":"https://openalex.org/C10138342","wikidata":"https://www.wikidata.org/wiki/Q43015","display_name":"Finance","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/gce.2014.10","is_oa":false,"landing_page_url":"https://doi.org/10.1109/gce.2014.10","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 9th Gateway Computing Environments Workshop","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.41999998688697815}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":5,"referenced_works":["https://openalex.org/W2090950329","https://openalex.org/W2104683098","https://openalex.org/W2153804545","https://openalex.org/W2408645863","https://openalex.org/W6675732403"],"related_works":["https://openalex.org/W1992503747","https://openalex.org/W2371519816","https://openalex.org/W2043154226","https://openalex.org/W2369529107","https://openalex.org/W3147805512","https://openalex.org/W2329043542","https://openalex.org/W2109948066","https://openalex.org/W1678858522","https://openalex.org/W3195090107","https://openalex.org/W38056103"],"abstract_inverted_index":{"The":[0,38,45],"Arabidopsis":[1,15],"Information":[2],"Portal":[3],"(AIP)":[4],"is":[5,22,56],"an":[6,75,97,112],"open-access":[7],"online":[8],"community":[9,73],"resource":[10],"for":[11,83,91,94,110],"research":[12],"on":[13],"the":[14,32,51,68,72,115],"thaliana":[16],"genome":[17],"and":[18,44,71,89,102,105],"related":[19],"data.":[20],"AIP":[21,55,69,86,95,116],"developed":[23,65],"through":[24],"a":[25,57,80,106],"partnership":[26],"between":[27],"J.":[28],"Craig":[29],"Venter":[30],"Institute,":[31],"Texas":[33,41],"Advanced":[34],"Computing":[35],"Center":[36],"at":[37,42],"University":[39,46],"of":[40,47,50,54],"Austin,":[43],"Cambridge.":[48],"Part":[49],"open":[52],"architecture":[53],"science":[58],"applications":[59,64,93],"workspace.":[60,117],"Researchers":[61],"can":[62],"select":[63],"both":[66],"by":[67],"team":[70],"from":[74],"\\app":[76],"store\"":[77],"to":[78],"construct":[79],"customized":[81],"environment":[82],"their":[84],"work.":[85],"provides":[87],"tooling":[88],"support":[90],"developing":[92],"including":[96],"application":[98,113],"generator,":[99],"interactive":[100],"development":[101],"testing":[103],"environment,":[104],"straightforward":[107],"deployment":[108],"path":[109],"deploying":[111],"into":[114]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
