{"id":"https://openalex.org/W2107305196","doi":"https://doi.org/10.1109/fuzzy.2010.5583953","title":"An ontological fuzzy Smith-Waterman with applications to patient retrieval in Electronic Medical Records","display_name":"An ontological fuzzy Smith-Waterman with applications to patient retrieval in Electronic Medical Records","publication_year":2010,"publication_date":"2010-07-01","ids":{"openalex":"https://openalex.org/W2107305196","doi":"https://doi.org/10.1109/fuzzy.2010.5583953","mag":"2107305196"},"language":"en","primary_location":{"id":"doi:10.1109/fuzzy.2010.5583953","is_oa":false,"landing_page_url":"https://doi.org/10.1109/fuzzy.2010.5583953","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Conference on Fuzzy Systems","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060329217","display_name":"Mihail Popescu","orcid":"https://orcid.org/0000-0002-6145-8096"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Mihail Popescu","raw_affiliation_strings":["Informatics Institute, University of Missouri, Columbia, MO, USA","University of Missouri Informatics Institute, Columbia, MO 65211, USA"],"affiliations":[{"raw_affiliation_string":"Informatics Institute, University of Missouri, Columbia, MO, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"University of Missouri Informatics Institute, Columbia, MO 65211, USA","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5060329217"],"corresponding_institution_ids":["https://openalex.org/I76835614"],"apc_list":null,"apc_paid":null,"fwci":0.451,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.7387718,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9861999750137329,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9861999750137329,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9828000068664551,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9713000059127808,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7240973711013794},{"id":"https://openalex.org/keywords/smith\u2013waterman-algorithm","display_name":"Smith\u2013Waterman algorithm","score":0.5848997235298157},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5731661319732666},{"id":"https://openalex.org/keywords/medical-diagnosis","display_name":"Medical diagnosis","score":0.5424443483352661},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5247828364372253},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.517707109451294},{"id":"https://openalex.org/keywords/fuzzy-logic","display_name":"Fuzzy logic","score":0.49348604679107666},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4726375937461853},{"id":"https://openalex.org/keywords/word","display_name":"Word (group theory)","score":0.46986067295074463},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4513418674468994},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.432686448097229},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4262143075466156},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4041626751422882},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.2767750918865204},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.10258433222770691},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09660258889198303}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7240973711013794},{"id":"https://openalex.org/C72802188","wikidata":"https://www.wikidata.org/wiki/Q1683352","display_name":"Smith\u2013Waterman algorithm","level":5,"score":0.5848997235298157},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5731661319732666},{"id":"https://openalex.org/C534262118","wikidata":"https://www.wikidata.org/wiki/Q177719","display_name":"Medical diagnosis","level":2,"score":0.5424443483352661},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5247828364372253},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.517707109451294},{"id":"https://openalex.org/C58166","wikidata":"https://www.wikidata.org/wiki/Q224821","display_name":"Fuzzy logic","level":2,"score":0.49348604679107666},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4726375937461853},{"id":"https://openalex.org/C90805587","wikidata":"https://www.wikidata.org/wiki/Q10944557","display_name":"Word (group theory)","level":2,"score":0.46986067295074463},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4513418674468994},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.432686448097229},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4262143075466156},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4041626751422882},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.2767750918865204},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.10258433222770691},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09660258889198303},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/fuzzy.2010.5583953","is_oa":false,"landing_page_url":"https://doi.org/10.1109/fuzzy.2010.5583953","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Conference on Fuzzy Systems","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W13978729","https://openalex.org/W155747005","https://openalex.org/W1577797262","https://openalex.org/W1976175925","https://openalex.org/W2037940305","https://openalex.org/W2039397434","https://openalex.org/W2057109784","https://openalex.org/W2087064593","https://openalex.org/W2099495349","https://openalex.org/W2100364461","https://openalex.org/W2101649596","https://openalex.org/W2106187164","https://openalex.org/W2129120742","https://openalex.org/W2171766700","https://openalex.org/W2179656887","https://openalex.org/W2414523293","https://openalex.org/W2425820257","https://openalex.org/W4323873904","https://openalex.org/W6600550936","https://openalex.org/W6606390379","https://openalex.org/W6717953764","https://openalex.org/W6850473726"],"related_works":["https://openalex.org/W4249377076","https://openalex.org/W4210389441","https://openalex.org/W1910186363","https://openalex.org/W2604451061","https://openalex.org/W2395241803","https://openalex.org/W2003211637","https://openalex.org/W2021488205","https://openalex.org/W2003333417","https://openalex.org/W2418110971","https://openalex.org/W2044769131"],"abstract_inverted_index":{"With":[0],"the":[1,63,76,91,102,108,117,142],"introduction":[2],"of":[3,62,90,134,141],"Electronic":[4],"Medical":[5],"Records":[6],"(EMR)":[7],"systems":[8],"in":[9,74,101,123],"health":[10,35],"care":[11,36],"institutions,":[12],"a":[13,51,59,83,146],"huge":[14],"data":[15,27],"repository":[16,28],"has":[17],"been":[18],"created.":[19],"By":[20],"employing":[21],"computational":[22],"intelligence":[23],"(CI)":[24],"techniques,":[25],"this":[26,47],"can":[29],"be":[30],"used":[31,73,105],"to":[32,96,106],"address":[33],"important":[34],"issues":[37],"such":[38],"as":[39],"improving":[40],"quality":[41],"and":[42],"reducing":[43],"medical":[44],"errors.":[45],"In":[46],"paper,":[48],"we":[49],"introduce":[50],"general":[52],"word":[53,70],"sequence":[54,77,133],"alignment":[55,78],"method":[56],"based":[57,81],"on":[58,82,145],"fuzzy":[60,88],"version":[61,89],"Smith-Waterman":[64],"(SW)":[65],"dynamic":[66],"programming":[67],"algorithm.":[68],"The":[69,87],"similarity":[71,109],"matrix":[72],"computing":[75],"is":[79,94,128],"calculated":[80],"domain":[84],"ontology":[85],"(taxonomy).":[86],"SW":[92],"algorithm":[93,119,144],"designed":[95],"accommodate":[97],"words":[98],"not":[99],"present":[100],"initial":[103],"dictionary":[104],"precompute":[107],"matrix,":[110],"hence":[111],"avoiding":[112],"its":[113],"recalculation.":[114],"We":[115,137],"apply":[116],"developed":[118],"for":[120],"patient":[121,127,147],"retrieval":[122],"an":[124,131],"EMR.":[125],"Each":[126],"described":[129,153],"by":[130,154],"ordered":[132],"ICD9":[135,155],"diagnoses.":[136],"analyze":[138],"various":[139],"properties":[140],"proposed":[143],"dataset":[148],"that":[149],"contains":[150],"107":[151],"patients":[152],"diagnose":[156],"sequences.":[157]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
