{"id":"https://openalex.org/W1970562434","doi":"https://doi.org/10.1109/fuzz-ieee.2013.6622483","title":"Incorporating fuzzy semantic similarity measure in detecting human protein complexes in PPI network: A multiobjective approach","display_name":"Incorporating fuzzy semantic similarity measure in detecting human protein complexes in PPI network: A multiobjective approach","publication_year":2013,"publication_date":"2013-07-01","ids":{"openalex":"https://openalex.org/W1970562434","doi":"https://doi.org/10.1109/fuzz-ieee.2013.6622483","mag":"1970562434"},"language":"en","primary_location":{"id":"doi:10.1109/fuzz-ieee.2013.6622483","is_oa":false,"landing_page_url":"https://doi.org/10.1109/fuzz-ieee.2013.6622483","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008522568","display_name":"Sumanta Ray","orcid":"https://orcid.org/0000-0002-3371-8516"},"institutions":[{"id":"https://openalex.org/I6498739","display_name":"Indian Statistical Institute","ror":"https://ror.org/00q2w1j53","country_code":"IN","type":"education","lineage":["https://openalex.org/I6498739"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Sumanta Ray","raw_affiliation_strings":["Machine Intelligence Unit, Indian Statistical Institute, Kolkata, West Bengal, India","Machine Intell. Unit, Indian Stat. Inst., Kolkata, India"],"affiliations":[{"raw_affiliation_string":"Machine Intelligence Unit, Indian Statistical Institute, Kolkata, West Bengal, India","institution_ids":["https://openalex.org/I6498739"]},{"raw_affiliation_string":"Machine Intell. Unit, Indian Stat. Inst., Kolkata, India","institution_ids":["https://openalex.org/I6498739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036061149","display_name":"Sanghamitra Bandyopadhyay","orcid":"https://orcid.org/0000-0001-6370-2083"},"institutions":[{"id":"https://openalex.org/I6498739","display_name":"Indian Statistical Institute","ror":"https://ror.org/00q2w1j53","country_code":"IN","type":"education","lineage":["https://openalex.org/I6498739"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Sanghamitra Bandyopadhyay","raw_affiliation_strings":["Machine Intelligence Unit, Indian Statistical Institute, Kolkata, West Bengal, India","Machine Intell. Unit, Indian Stat. Inst., Kolkata, India"],"affiliations":[{"raw_affiliation_string":"Machine Intelligence Unit, Indian Statistical Institute, Kolkata, West Bengal, India","institution_ids":["https://openalex.org/I6498739"]},{"raw_affiliation_string":"Machine Intell. Unit, Indian Stat. Inst., Kolkata, India","institution_ids":["https://openalex.org/I6498739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016363044","display_name":"Anirban Mukhopadhyay","orcid":"https://orcid.org/0000-0001-8128-3521"},"institutions":[{"id":"https://openalex.org/I77501641","display_name":"University of Kalyani","ror":"https://ror.org/03v783k16","country_code":"IN","type":"education","lineage":["https://openalex.org/I77501641"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Anirban Mukhopadhyay","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Kalyani, Kalyani, West Bengal, India","(Department of Computer Science & Engineering, University of Kalyani, Kalyani, India)"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Kalyani, Kalyani, West Bengal, India","institution_ids":["https://openalex.org/I77501641"]},{"raw_affiliation_string":"(Department of Computer Science & Engineering, University of Kalyani, Kalyani, India)","institution_ids":["https://openalex.org/I77501641"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072356717","display_name":"Ujjwal Maulik","orcid":"https://orcid.org/0000-0003-1167-0774"},"institutions":[{"id":"https://openalex.org/I170979836","display_name":"Jadavpur University","ror":"https://ror.org/02af4h012","country_code":"IN","type":"education","lineage":["https://openalex.org/I170979836"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ujjwal Maulik","raw_affiliation_strings":["Department of Computer Science and Engineering, Jadavpur University, Kolkata, West Bengal, India","[Department of Computer Science & Engineering, Jadavpur University, Kolkata, India]"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Jadavpur University, Kolkata, West Bengal, India","institution_ids":["https://openalex.org/I170979836"]},{"raw_affiliation_string":"[Department of Computer Science & Engineering, Jadavpur University, Kolkata, India]","institution_ids":["https://openalex.org/I170979836"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5008522568"],"corresponding_institution_ids":["https://openalex.org/I6498739"],"apc_list":null,"apc_paid":null,"fwci":0.4386,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.63685175,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7282914519309998},{"id":"https://openalex.org/keywords/centrality","display_name":"Centrality","score":0.6259123086929321},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5992196798324585},{"id":"https://openalex.org/keywords/semantic-similarity","display_name":"Semantic similarity","score":0.5970162749290466},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5888605117797852},{"id":"https://openalex.org/keywords/fuzzy-logic","display_name":"Fuzzy logic","score":0.5550259351730347},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.533332884311676},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5165290236473083},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.5138673782348633},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.5028955340385437},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.4760320484638214},{"id":"https://openalex.org/keywords/measure","display_name":"Measure (data warehouse)","score":0.4476562440395355},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.44582924246788025},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4250970780849457},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3457629680633545},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.26328110694885254},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1346132755279541},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11057424545288086},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.08203819394111633}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7282914519309998},{"id":"https://openalex.org/C53811970","wikidata":"https://www.wikidata.org/wiki/Q5062194","display_name":"Centrality","level":2,"score":0.6259123086929321},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5992196798324585},{"id":"https://openalex.org/C130318100","wikidata":"https://www.wikidata.org/wiki/Q2268914","display_name":"Semantic similarity","level":2,"score":0.5970162749290466},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5888605117797852},{"id":"https://openalex.org/C58166","wikidata":"https://www.wikidata.org/wiki/Q224821","display_name":"Fuzzy logic","level":2,"score":0.5550259351730347},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.533332884311676},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5165290236473083},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.5138673782348633},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.5028955340385437},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.4760320484638214},{"id":"https://openalex.org/C2780009758","wikidata":"https://www.wikidata.org/wiki/Q6804172","display_name":"Measure (data warehouse)","level":2,"score":0.4476562440395355},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.44582924246788025},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4250970780849457},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3457629680633545},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.26328110694885254},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1346132755279541},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11057424545288086},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.08203819394111633},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/fuzz-ieee.2013.6622483","is_oa":false,"landing_page_url":"https://doi.org/10.1109/fuzz-ieee.2013.6622483","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.6100000143051147,"display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1783384641","https://openalex.org/W1840163537","https://openalex.org/W1982732700","https://openalex.org/W2003098906","https://openalex.org/W2006485696","https://openalex.org/W2029857102","https://openalex.org/W2082565035","https://openalex.org/W2083045667","https://openalex.org/W2086320165","https://openalex.org/W2097795961","https://openalex.org/W2099495349","https://openalex.org/W2100585269","https://openalex.org/W2109047523","https://openalex.org/W2117526623","https://openalex.org/W2121343862","https://openalex.org/W2126105956","https://openalex.org/W2136850043","https://openalex.org/W2152495216","https://openalex.org/W2155782048","https://openalex.org/W2156070536","https://openalex.org/W2165232124","https://openalex.org/W2489066590","https://openalex.org/W6677365647"],"related_works":["https://openalex.org/W2322248538","https://openalex.org/W118100147","https://openalex.org/W2135602072","https://openalex.org/W2107952955","https://openalex.org/W2265558044","https://openalex.org/W2163095708","https://openalex.org/W1999493785","https://openalex.org/W2792440843","https://openalex.org/W2042301222","https://openalex.org/W2565684071"],"abstract_inverted_index":{"Detection":[0],"of":[1,16,28,39,43,133,148,154,161],"protein":[2,67,80],"complexes":[3,68,128,164],"within":[4],"protein-protein":[5],"interaction":[6],"networks":[7],"(PPIN)":[8],"is":[9,53,118],"a":[10,40,61,103],"valuable":[11],"step":[12],"toward":[13],"the":[14,44,93,96,121,126],"analysis":[15],"biological":[17,159],"processes":[18],"and":[19,50,125,137],"pathways.":[20],"Several":[21],"high-throughput":[22],"experimental":[23],"techniques":[24],"produce":[25],"large":[26,71],"number":[27],"PPIs":[29],"that":[30,147],"can":[31],"be":[32],"extensively":[33],"utilized":[34,90],"for":[35,64,91],"constructing":[36],"PPI":[37,46,73,123],"network":[38,47,74,124],"species.":[41],"Decomposition":[42],"whole":[45],"into":[48,75],"smaller":[49],"manageable":[51],"modules":[52],"an":[54],"ongoing":[55],"challenge.":[56],"Here":[57],"we":[58,99],"have":[59,100,141],"developed":[60],"multi-objective":[62],"algorithm":[63],"detecting":[65],"human":[66,72,122],"by":[69,169],"partitioning":[70],"clusters":[76],"which":[77],"serve":[78],"as":[79],"complexes.":[81],"Some":[82],"graphical":[83,97],"properties":[84,98],"like":[85],"density,":[86],"centrality":[87],"etc.,":[88],"are":[89,129,165],"building":[92],"objectives.":[94],"Besides":[95],"also":[101,142,166],"exploited":[102],"fuzzy":[104],"measure":[105],"based":[106,113],"semantic":[107],"similarity":[108,112],"approach":[109],"to":[110],"construct":[111],"objective.":[114],"The":[115,158],"proposed":[116],"technique":[117],"demonstrated":[119],"in":[120,131,152],"resulting":[127],"analyzed":[130],"context":[132,153],"Gene":[134],"Ontology":[135],"(GO)":[136],"pathway":[138],"enrichment.":[139],"We":[140],"compared":[143],"our":[144,162],"results":[145],"with":[146,172],"some":[149],"state-of-the-art":[150],"algorithms":[151],"different":[155],"performance":[156],"metrics.":[157],"relevance":[160],"predicted":[163],"established":[167],"here":[168],"linking":[170],"them":[171],"22":[173],"key":[174],"disease":[175],"classes.":[176]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
