{"id":"https://openalex.org/W4406264582","doi":"https://doi.org/10.1109/euvip61797.2024.10772785","title":"Thyroidiomics: An Automated Pipeline for Segmentation and Classification of Thyroid Pathologies from Scintigraphy Images","display_name":"Thyroidiomics: An Automated Pipeline for Segmentation and Classification of Thyroid Pathologies from Scintigraphy Images","publication_year":2024,"publication_date":"2024-09-08","ids":{"openalex":"https://openalex.org/W4406264582","doi":"https://doi.org/10.1109/euvip61797.2024.10772785"},"language":"en","primary_location":{"id":"doi:10.1109/euvip61797.2024.10772785","is_oa":false,"landing_page_url":"https://doi.org/10.1109/euvip61797.2024.10772785","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 12th European Workshop on Visual Information Processing (EUVIP)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087611160","display_name":"Maziar Sabouri","orcid":"https://orcid.org/0000-0001-7525-8952"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Maziar Sabouri","raw_affiliation_strings":["University of British Columbia,Vancouver,Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of British Columbia,Vancouver,Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044877506","display_name":"Shadab Ahamed","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Shadab Ahamed","raw_affiliation_strings":["University of British Columbia,Vancouver,Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of British Columbia,Vancouver,Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104621803","display_name":"Azin Asadzadeh","orcid":null},"institutions":[{"id":"https://openalex.org/I198873322","display_name":"Golestan University","ror":"https://ror.org/046nf9z89","country_code":"IR","type":"education","lineage":["https://openalex.org/I198873322"]},{"id":"https://openalex.org/I4210127922","display_name":"Golestan University of Medical Sciences","ror":"https://ror.org/03mcx2558","country_code":"IR","type":"education","lineage":["https://openalex.org/I4210127922"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Azin Asadzadeh","raw_affiliation_strings":["Golestan University of Medical Sciences,Gorgan,Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Golestan University of Medical Sciences,Gorgan,Iran","institution_ids":["https://openalex.org/I198873322","https://openalex.org/I4210127922"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002885963","display_name":"Atlas Haddadi Avval","orcid":"https://orcid.org/0000-0002-3896-7810"},"institutions":[{"id":"https://openalex.org/I165560825","display_name":"Mashhad University of Medical Sciences","ror":"https://ror.org/04sfka033","country_code":"IR","type":"education","lineage":["https://openalex.org/I165560825"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Atlas Haddadi Avval","raw_affiliation_strings":["Mashhad University of Medical Sciences,Mashhad,Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mashhad University of Medical Sciences,Mashhad,Iran","institution_ids":["https://openalex.org/I165560825"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086048556","display_name":"Soroush Bagheri","orcid":"https://orcid.org/0009-0007-6227-2166"},"institutions":[{"id":"https://openalex.org/I198876898","display_name":"Kashan University of Medical Sciences","ror":"https://ror.org/03dc0dy65","country_code":"IR","type":"education","lineage":["https://openalex.org/I198876898"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Soroush Bagheri","raw_affiliation_strings":["Kashan University of Medical Sciences,Kashan,Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kashan University of Medical Sciences,Kashan,Iran","institution_ids":["https://openalex.org/I198876898"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058937819","display_name":"Mohsen Arabi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210109561","display_name":"Jahrom University of Medical Sciences","ror":"https://ror.org/01yxvpn13","country_code":"IR","type":"healthcare","lineage":["https://openalex.org/I4210109561"]},{"id":"https://openalex.org/I4387153077","display_name":"Alborz University of Medical Sciences","ror":"https://ror.org/03hh69c20","country_code":null,"type":"education","lineage":["https://openalex.org/I4387153077"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Mohsen Arabi","raw_affiliation_strings":["Alborz University of Medical Sciences,Karaj,Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Alborz University of Medical Sciences,Karaj,Iran","institution_ids":["https://openalex.org/I4210109561","https://openalex.org/I4387153077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041867021","display_name":"Seyed Rasoul Zakavi","orcid":"https://orcid.org/0000-0002-8276-2134"},"institutions":[{"id":"https://openalex.org/I165560825","display_name":"Mashhad University of Medical Sciences","ror":"https://ror.org/04sfka033","country_code":"IR","type":"education","lineage":["https://openalex.org/I165560825"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Seyed Rasoul Zakavi","raw_affiliation_strings":["Mashhad University of Medical Sciences,Mashhad,Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mashhad University of Medical Sciences,Mashhad,Iran","institution_ids":["https://openalex.org/I165560825"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042674189","display_name":"Emran Askari","orcid":"https://orcid.org/0000-0002-2973-2251"},"institutions":[{"id":"https://openalex.org/I165560825","display_name":"Mashhad University of Medical Sciences","ror":"https://ror.org/04sfka033","country_code":"IR","type":"education","lineage":["https://openalex.org/I165560825"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Emran Askari","raw_affiliation_strings":["Mashhad University of Medical Sciences,Mashhad,Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mashhad University of Medical Sciences,Mashhad,Iran","institution_ids":["https://openalex.org/I165560825"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031425815","display_name":"Ali Rasouli","orcid":"https://orcid.org/0000-0002-0313-0236"},"institutions":[{"id":"https://openalex.org/I198876898","display_name":"Kashan University of Medical Sciences","ror":"https://ror.org/03dc0dy65","country_code":"IR","type":"education","lineage":["https://openalex.org/I198876898"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Ali Rasouli","raw_affiliation_strings":["Kashan University of Medical Sciences,Kashan,Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kashan University of Medical Sciences,Kashan,Iran","institution_ids":["https://openalex.org/I198876898"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081415536","display_name":"Atena Aghaee","orcid":"https://orcid.org/0000-0002-1351-3142"},"institutions":[{"id":"https://openalex.org/I165560825","display_name":"Mashhad University of Medical Sciences","ror":"https://ror.org/04sfka033","country_code":"IR","type":"education","lineage":["https://openalex.org/I165560825"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Atena Aghaee","raw_affiliation_strings":["Mashhad University of Medical Sciences,Mashhad,Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mashhad University of Medical Sciences,Mashhad,Iran","institution_ids":["https://openalex.org/I165560825"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104621802","display_name":"Mohaddese Sehati","orcid":null},"institutions":[{"id":"https://openalex.org/I198873322","display_name":"Golestan University","ror":"https://ror.org/046nf9z89","country_code":"IR","type":"education","lineage":["https://openalex.org/I198873322"]},{"id":"https://openalex.org/I4210127922","display_name":"Golestan University of Medical Sciences","ror":"https://ror.org/03mcx2558","country_code":"IR","type":"education","lineage":["https://openalex.org/I4210127922"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Mohaddese Sehati","raw_affiliation_strings":["Golestan University of Medical Sciences,Gorgan,Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Golestan University of Medical Sciences,Gorgan,Iran","institution_ids":["https://openalex.org/I198873322","https://openalex.org/I4210127922"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058744346","display_name":"Fereshteh Yousefirizi","orcid":"https://orcid.org/0000-0001-5261-6163"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Fereshteh Yousefirizi","raw_affiliation_strings":["BC Cancer Research Institute,Vancouver,Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BC Cancer Research Institute,Vancouver,Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077969822","display_name":"Carlos Uribe","orcid":"https://orcid.org/0000-0003-3127-7478"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Carlos Uribe","raw_affiliation_strings":["BC Cancer Research Institute,Vancouver,Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BC Cancer Research Institute,Vancouver,Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049491814","display_name":"Ghasem Hajianfar","orcid":"https://orcid.org/0000-0001-5359-2407"},"institutions":[{"id":"https://openalex.org/I4210106256","display_name":"University Hospital of Geneva","ror":"https://ror.org/01m1pv723","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I4210106256"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Ghasem Hajianfar","raw_affiliation_strings":["Geneva University Hospital,Geneva,Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Geneva University Hospital,Geneva,Switzerland","institution_ids":["https://openalex.org/I4210106256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007891293","display_name":"Habib Zaidi","orcid":"https://orcid.org/0000-0001-7559-5297"},"institutions":[{"id":"https://openalex.org/I4210106256","display_name":"University Hospital of Geneva","ror":"https://ror.org/01m1pv723","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I4210106256"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Habib Zaidi","raw_affiliation_strings":["Geneva University Hospital,Geneva,Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Geneva University Hospital,Geneva,Switzerland","institution_ids":["https://openalex.org/I4210106256"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021438906","display_name":"Arman Rahmim","orcid":"https://orcid.org/0000-0002-9980-2403"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Arman Rahmim","raw_affiliation_strings":["University of British Columbia,Vancouver,Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of British Columbia,Vancouver,Canada","institution_ids":["https://openalex.org/I141945490"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":3.1025,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.92648197,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9732000231742859,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9732000231742859,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11363","display_name":"Dental Radiography and Imaging","score":0.9628999829292297,"subfield":{"id":"https://openalex.org/subfields/3504","display_name":"Oral Surgery"},"field":{"id":"https://openalex.org/fields/35","display_name":"Dentistry"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6996186971664429},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6510829925537109},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.6413583159446716},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5801964402198792},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5287686586380005},{"id":"https://openalex.org/keywords/scintigraphy","display_name":"Scintigraphy","score":0.47443071007728577},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.43545860052108765},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3545365333557129},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.2524585723876953},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2274242639541626}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6996186971664429},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6510829925537109},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.6413583159446716},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5801964402198792},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5287686586380005},{"id":"https://openalex.org/C2779902710","wikidata":"https://www.wikidata.org/wiki/Q1130465","display_name":"Scintigraphy","level":2,"score":0.47443071007728577},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.43545860052108765},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3545365333557129},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.2524585723876953},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2274242639541626},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/euvip61797.2024.10772785","is_oa":false,"landing_page_url":"https://doi.org/10.1109/euvip61797.2024.10772785","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 12th European Workshop on Visual Information Processing (EUVIP)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7869408999","display_name":"Quantitative Oncological PET Image Generation and Analysis","funder_award_id":"rgpin-2019-06467","funder_id":"https://openalex.org/F4320334593","funder_display_name":"Natural Sciences and Engineering Research Council of Canada"}],"funders":[{"id":"https://openalex.org/F4320329172","display_name":"BC Cancer Foundation","ror":"https://ror.org/03gqhbs95"},{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W3037187668","https://openalex.org/W4234772502","https://openalex.org/W2380685755","https://openalex.org/W2252100032","https://openalex.org/W2963436428","https://openalex.org/W4400978025","https://openalex.org/W2918743509","https://openalex.org/W2734796617","https://openalex.org/W4388446985","https://openalex.org/W1522196789"],"abstract_inverted_index":{"The":[0,200,225],"objective":[1],"of":[2],"this":[3],"study":[4],"was":[5,65,121,132],"to":[6,21,67,206],"develop":[7],"an":[8,58,177,191],"automated":[9,201],"pipeline":[10,202],"that":[11],"enhances":[12],"thyroid":[13,17,30],"disease":[14],"classification":[15,130,189,211],"using":[16,90,96,123,134],"scintigraphy":[18,31],"images,":[19],"aiming":[20],"decrease":[22],"assessment":[23,218],"time":[24,219],"and":[25,38,47,54,79,93,150,169],"increase":[26],"diagnostic":[27,223],"accuracy.":[28,224],"Anterior":[29],"images":[32],"from":[33,74],"2,643":[34],"patients":[35],"were":[36,72,111],"collected":[37],"categorized":[39],"into":[40],"diffuse":[41],"goiter":[42,45],"(DG),":[43],"multinodal":[44],"(MNG),":[46],"thyroiditis":[48],"(TH)":[49],"based":[50],"on":[51,209],"clinical":[52],"reports,":[53],"then":[55],"segmented":[56],"by":[57,85],"expert.":[59],"A":[60],"Residual":[61],"UNet":[62],"(ResUNet)":[63],"model":[64],"trained":[66,112],"perform":[68],"auto-segmentation.":[69],"Radiomic":[70],"features":[71,89],"extracted":[73],"both":[75],"physician":[76,207],"(scenario":[77,82],"1)":[78],"ResUNet":[80,158],"segmentations":[81,208],"2),":[83],"followed":[84],"omitting":[86],"highly":[87],"correlated":[88],"Spearman's":[91],"correlation,":[92],"feature":[94],"selection":[95],"Recursive":[97],"Feature":[98],"Elimination":[99],"(RFE)":[100],"with":[101],"eXtreme":[102],"Gradient":[103],"Boosting":[104],"(XGBoost)":[105],"as":[106,137],"the":[107,124,144,153],"core.":[108],"All":[109],"models":[110],"under":[113,143,152],"a":[114,181,195],"leave-one-center-out":[115],"cross-validation":[116],"(LOCOCV)":[117],"scheme.":[118],"Segmentation":[119],"performance":[120,131,205],"assessed":[122,133],"Dice":[125],"similarity":[126],"coefficient":[127],"(DSC),":[128],"while":[129,220],"metrics,":[135],"such":[136],"precision,":[138],"recall,":[139],"F1-score,":[140],"accuracy,":[141],"area":[142,151],"Receiver":[145],"Operating":[146],"Characteristic":[147],"(ROC":[148],"AUC),":[149],"precision-recall":[154],"curve":[155],"(PRC":[156],"AUC).":[157],"achieved":[159,176],"DSC":[160],"values":[161],"of$0.84\\pm":[162],"0.03,0.71\\pm":[163],"0.06$,":[164],"and$0.86\\pm":[165],"0.02$for":[166],"MNG,":[167],"TH,":[168],"DG,":[170],"respectively.":[171],"Classification":[172],"in":[173,186],"scenario":[174,187],"1":[175],"accuracy":[178,192],"of$0.76\\pm":[179],"0.04$and":[180],"ROC":[182,196],"AUC":[183,197],"of$0.92\\pm":[184],"0.02$while":[185],"2,":[188],"yielded":[190],"of$0.74\\pm":[193],"0.05$and":[194],"of$0.90\\pm":[198],"0.02$.":[199],"demonstrated":[203],"comparable":[204],"several":[210],"metrics":[212],"across":[213],"different":[214],"classes,":[215],"effectively":[216],"reducing":[217],"maintaining":[221],"high":[222],"code":[226],"is":[227],"available":[228],"at:":[229],"https://github.com/ahxmeds/thyroidiomics.git.":[230]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
