{"id":"https://openalex.org/W4387411278","doi":"https://doi.org/10.1109/esscirc59616.2023.10268783","title":"A 65nm RRAM Compute-in-Memory Macro for Genome Sequencing Alignment","display_name":"A 65nm RRAM Compute-in-Memory Macro for Genome Sequencing Alignment","publication_year":2023,"publication_date":"2023-09-11","ids":{"openalex":"https://openalex.org/W4387411278","doi":"https://doi.org/10.1109/esscirc59616.2023.10268783"},"language":"en","primary_location":{"id":"doi:10.1109/esscirc59616.2023.10268783","is_oa":false,"landing_page_url":"https://doi.org/10.1109/esscirc59616.2023.10268783","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ESSCIRC 2023- IEEE 49th European Solid State Circuits Conference (ESSCIRC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074715434","display_name":"Fan Zhang","orcid":"https://orcid.org/0000-0002-6823-2700"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Fan Zhang","raw_affiliation_strings":["Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","institution_ids":["https://openalex.org/I55732556"]},{"raw_affiliation_string":"School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018917330","display_name":"Wangxin He","orcid":"https://orcid.org/0000-0003-1882-545X"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wangxin He","raw_affiliation_strings":["Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","institution_ids":["https://openalex.org/I55732556"]},{"raw_affiliation_string":"School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057187008","display_name":"Injune Yeo","orcid":"https://orcid.org/0000-0002-4596-6170"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Injune Yeo","raw_affiliation_strings":["Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","institution_ids":["https://openalex.org/I55732556"]},{"raw_affiliation_string":"School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059526101","display_name":"Maximilian Liehr","orcid":"https://orcid.org/0000-0002-3945-6422"},"institutions":[{"id":"https://openalex.org/I90965887","display_name":"SUNY Polytechnic Institute","ror":"https://ror.org/000fxgx19","country_code":"US","type":"education","lineage":["https://openalex.org/I90965887"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Maximilian Liehr","raw_affiliation_strings":["SUNY Polytechnic Institute,College of Nanoscale Science and Engineering,Albany,NY,USA","College of Nanoscale Science and Engineering, SUNY Polytechnic Institute, Albany, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"SUNY Polytechnic Institute,College of Nanoscale Science and Engineering,Albany,NY,USA","institution_ids":["https://openalex.org/I90965887"]},{"raw_affiliation_string":"College of Nanoscale Science and Engineering, SUNY Polytechnic Institute, Albany, NY, USA","institution_ids":["https://openalex.org/I90965887"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046312510","display_name":"Nathaniel C. Cady","orcid":"https://orcid.org/0000-0003-4345-3627"},"institutions":[{"id":"https://openalex.org/I90965887","display_name":"SUNY Polytechnic Institute","ror":"https://ror.org/000fxgx19","country_code":"US","type":"education","lineage":["https://openalex.org/I90965887"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nathaniel Cady","raw_affiliation_strings":["SUNY Polytechnic Institute,College of Nanoscale Science and Engineering,Albany,NY,USA","College of Nanoscale Science and Engineering, SUNY Polytechnic Institute, Albany, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"SUNY Polytechnic Institute,College of Nanoscale Science and Engineering,Albany,NY,USA","institution_ids":["https://openalex.org/I90965887"]},{"raw_affiliation_string":"College of Nanoscale Science and Engineering, SUNY Polytechnic Institute, Albany, NY, USA","institution_ids":["https://openalex.org/I90965887"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100740019","display_name":"Yu Cao","orcid":"https://orcid.org/0000-0001-6968-1180"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yu Cao","raw_affiliation_strings":["Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","institution_ids":["https://openalex.org/I55732556"]},{"raw_affiliation_string":"School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007690955","display_name":"Jae-sun Seo","orcid":"https://orcid.org/0000-0002-4551-7789"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jae-Sun Seo","raw_affiliation_strings":["Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","institution_ids":["https://openalex.org/I55732556"]},{"raw_affiliation_string":"School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047916979","display_name":"Deliang Fan","orcid":"https://orcid.org/0000-0002-7989-6297"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Deliang Fan","raw_affiliation_strings":["Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona State University,School of Electrical, Computer and Energy Engineering,Tempe,AZ,USA","institution_ids":["https://openalex.org/I55732556"]},{"raw_affiliation_string":"School of Electrical, Computer and Energy Engineering, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5074715434"],"corresponding_institution_ids":["https://openalex.org/I55732556"],"apc_list":null,"apc_paid":null,"fwci":0.4352,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.67077891,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"117","last_page":"120"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10502","display_name":"Advanced Memory and Neural Computing","score":0.9925000071525574,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/resistive-random-access-memory","display_name":"Resistive random-access memory","score":0.8350620269775391},{"id":"https://openalex.org/keywords/bottleneck","display_name":"Bottleneck","score":0.8123737573623657},{"id":"https://openalex.org/keywords/macro","display_name":"Macro","score":0.6229782104492188},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6168316602706909},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.5268391966819763},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.5139098167419434},{"id":"https://openalex.org/keywords/xnor-gate","display_name":"XNOR gate","score":0.5066619515419006},{"id":"https://openalex.org/keywords/computer-hardware","display_name":"Computer hardware","score":0.32027482986450195},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.2954895496368408},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.18445369601249695},{"id":"https://openalex.org/keywords/embedded-system","display_name":"Embedded system","score":0.18277469277381897},{"id":"https://openalex.org/keywords/logic-gate","display_name":"Logic gate","score":0.15068307518959045},{"id":"https://openalex.org/keywords/electrical-engineering","display_name":"Electrical engineering","score":0.14066308736801147},{"id":"https://openalex.org/keywords/nand-gate","display_name":"NAND gate","score":0.131291925907135},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09894168376922607}],"concepts":[{"id":"https://openalex.org/C182019814","wikidata":"https://www.wikidata.org/wiki/Q1143830","display_name":"Resistive random-access memory","level":3,"score":0.8350620269775391},{"id":"https://openalex.org/C2780513914","wikidata":"https://www.wikidata.org/wiki/Q18210350","display_name":"Bottleneck","level":2,"score":0.8123737573623657},{"id":"https://openalex.org/C166955791","wikidata":"https://www.wikidata.org/wiki/Q629579","display_name":"Macro","level":2,"score":0.6229782104492188},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6168316602706909},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.5268391966819763},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.5139098167419434},{"id":"https://openalex.org/C57684291","wikidata":"https://www.wikidata.org/wiki/Q1336142","display_name":"XNOR gate","level":4,"score":0.5066619515419006},{"id":"https://openalex.org/C9390403","wikidata":"https://www.wikidata.org/wiki/Q3966","display_name":"Computer hardware","level":1,"score":0.32027482986450195},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.2954895496368408},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.18445369601249695},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.18277469277381897},{"id":"https://openalex.org/C131017901","wikidata":"https://www.wikidata.org/wiki/Q170451","display_name":"Logic gate","level":2,"score":0.15068307518959045},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.14066308736801147},{"id":"https://openalex.org/C124296912","wikidata":"https://www.wikidata.org/wiki/Q575178","display_name":"NAND gate","level":3,"score":0.131291925907135},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09894168376922607},{"id":"https://openalex.org/C165801399","wikidata":"https://www.wikidata.org/wiki/Q25428","display_name":"Voltage","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/esscirc59616.2023.10268783","is_oa":false,"landing_page_url":"https://doi.org/10.1109/esscirc59616.2023.10268783","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ESSCIRC 2023- IEEE 49th European Solid State Circuits Conference (ESSCIRC)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/7","display_name":"Affordable and clean energy","score":0.8999999761581421}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":13,"referenced_works":["https://openalex.org/W2103441770","https://openalex.org/W2141546789","https://openalex.org/W2330100020","https://openalex.org/W2765884744","https://openalex.org/W2946017187","https://openalex.org/W3046494740","https://openalex.org/W3101704407","https://openalex.org/W3168237193","https://openalex.org/W3212381966","https://openalex.org/W4288068936","https://openalex.org/W4308089475","https://openalex.org/W4319986835","https://openalex.org/W6683504902"],"related_works":["https://openalex.org/W2108719777","https://openalex.org/W2910771446","https://openalex.org/W2966758645","https://openalex.org/W2559054477","https://openalex.org/W2122693377","https://openalex.org/W2532170798","https://openalex.org/W4320854861","https://openalex.org/W3048955117","https://openalex.org/W2166656370","https://openalex.org/W4283787567"],"abstract_inverted_index":{"In":[0],"genomic":[1],"analysis,":[2],"the":[3,8,22,45,76],"major":[4],"computation":[5],"bottleneck":[6],"is":[7],"memory-and":[9],"compute-intensive":[10],"DNA":[11],"short":[12],"reads":[13],"alignment":[14,57],"due":[15],"to":[16,80],"memory-wall":[17],"challenge.":[18],"This":[19],"work":[20],"presents":[21],"first":[23],"Resistive":[24],"RAM":[25],"(RRAM)":[26],"based":[27,36,50],"Compute-in-Memory":[28],"(CIM)":[29],"macro":[30,62],"design":[31,41],"for":[32],"accelerating":[33],"state-of-the-art":[34],"BWT":[35],"genome":[37],"sequencing":[38],"alignment.":[39],"Our":[40],"could":[42],"support":[43],"all":[44],"core":[46],"instructions,":[47],"i.e.,":[48],"XNOR":[49],"match,":[51],"count,":[52],"and":[53,72,85],"addition,":[54],"required":[55],"by":[56],"algorithm.":[58],"The":[59],"proposed":[60],"CIM":[61],"implemented":[63],"in":[64],"integration":[65],"of":[66],"HfO":[67],"<inf":[68],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[69],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">2</inf>":[70],"RRAM":[71],"65nm":[73],"CMOS":[74],"demonstrates":[75],"best":[77],"energy":[78],"efficiency":[79],"date":[81],"with":[82],"2.07":[83],"TOPS/W":[84],"2.":[86],"12Gsuffixes/J":[87],"at":[88],"1.":[89],"0V.":[90]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-26T13:28:51.108037","created_date":"2025-10-10T00:00:00"}