{"id":"https://openalex.org/W4312869181","doi":"https://doi.org/10.1109/escience55777.2022.00044","title":"A Web-Based System for Contagion Simulations on Networked Populations","display_name":"A Web-Based System for Contagion Simulations on Networked Populations","publication_year":2022,"publication_date":"2022-10-01","ids":{"openalex":"https://openalex.org/W4312869181","doi":"https://doi.org/10.1109/escience55777.2022.00044"},"language":"en","primary_location":{"id":"doi:10.1109/escience55777.2022.00044","is_oa":false,"landing_page_url":"https://doi.org/10.1109/escience55777.2022.00044","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE 18th International Conference on e-Science (e-Science)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.7158096","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088751283","display_name":"Tanvir Ferdousi","orcid":"https://orcid.org/0000-0003-2847-3494"},"institutions":[{"id":"https://openalex.org/I51556381","display_name":"University of Virginia","ror":"https://ror.org/0153tk833","country_code":"US","type":"education","lineage":["https://openalex.org/I51556381"]},{"id":"https://openalex.org/I4210151352","display_name":"Biocom","ror":"https://ror.org/03ymdxs56","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210151352"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Tanvir Ferdousi","raw_affiliation_strings":["Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904"],"affiliations":[{"raw_affiliation_string":"Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904","institution_ids":["https://openalex.org/I51556381","https://openalex.org/I4210151352"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084992543","display_name":"Aparna Kishore","orcid":"https://orcid.org/0000-0001-7447-4100"},"institutions":[{"id":"https://openalex.org/I51556381","display_name":"University of Virginia","ror":"https://ror.org/0153tk833","country_code":"US","type":"education","lineage":["https://openalex.org/I51556381"]},{"id":"https://openalex.org/I4210151352","display_name":"Biocom","ror":"https://ror.org/03ymdxs56","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210151352"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aparna Kishore","raw_affiliation_strings":["Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904"],"affiliations":[{"raw_affiliation_string":"Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904","institution_ids":["https://openalex.org/I51556381","https://openalex.org/I4210151352"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052278803","display_name":"Lucas Machi","orcid":null},"institutions":[{"id":"https://openalex.org/I51556381","display_name":"University of Virginia","ror":"https://ror.org/0153tk833","country_code":"US","type":"education","lineage":["https://openalex.org/I51556381"]},{"id":"https://openalex.org/I4210151352","display_name":"Biocom","ror":"https://ror.org/03ymdxs56","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210151352"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lucas Machi","raw_affiliation_strings":["Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904"],"affiliations":[{"raw_affiliation_string":"Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904","institution_ids":["https://openalex.org/I51556381","https://openalex.org/I4210151352"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003775830","display_name":"Dustin Machi","orcid":"https://orcid.org/0000-0002-9081-6526"},"institutions":[{"id":"https://openalex.org/I4210151352","display_name":"Biocom","ror":"https://ror.org/03ymdxs56","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210151352"]},{"id":"https://openalex.org/I51556381","display_name":"University of Virginia","ror":"https://ror.org/0153tk833","country_code":"US","type":"education","lineage":["https://openalex.org/I51556381"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dustin Machi","raw_affiliation_strings":["Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904"],"affiliations":[{"raw_affiliation_string":"Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904","institution_ids":["https://openalex.org/I51556381","https://openalex.org/I4210151352"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006412870","display_name":"Chris J. Kuhlman","orcid":"https://orcid.org/0000-0002-9368-2156"},"institutions":[{"id":"https://openalex.org/I4210151352","display_name":"Biocom","ror":"https://ror.org/03ymdxs56","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210151352"]},{"id":"https://openalex.org/I51556381","display_name":"University of Virginia","ror":"https://ror.org/0153tk833","country_code":"US","type":"education","lineage":["https://openalex.org/I51556381"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris J. Kuhlman","raw_affiliation_strings":["Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904"],"affiliations":[{"raw_affiliation_string":"Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904","institution_ids":["https://openalex.org/I51556381","https://openalex.org/I4210151352"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086740853","display_name":"S. S. Ravi","orcid":"https://orcid.org/0000-0002-0893-4364"},"institutions":[{"id":"https://openalex.org/I4210151352","display_name":"Biocom","ror":"https://ror.org/03ymdxs56","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210151352"]},{"id":"https://openalex.org/I51556381","display_name":"University of Virginia","ror":"https://ror.org/0153tk833","country_code":"US","type":"education","lineage":["https://openalex.org/I51556381"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. S. Ravi","raw_affiliation_strings":["Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904"],"affiliations":[{"raw_affiliation_string":"Biocomplexity Institute and Initiative, University of Virginia,Charlottesville,VA,USA,22904","institution_ids":["https://openalex.org/I51556381","https://openalex.org/I4210151352"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5088751283"],"corresponding_institution_ids":["https://openalex.org/I4210151352","https://openalex.org/I51556381"],"apc_list":null,"apc_paid":null,"fwci":0.1217,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.43826403,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"91","issue":null,"first_page":"306","last_page":"315"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12592","display_name":"Opinion Dynamics and Social Influence","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12592","display_name":"Opinion Dynamics and Social Influence","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11980","display_name":"Human Mobility and Location-Based Analysis","score":0.9876000285148621,"subfield":{"id":"https://openalex.org/subfields/3313","display_name":"Transportation"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/executable","display_name":"Executable","score":0.8545433282852173},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8270684480667114},{"id":"https://openalex.org/keywords/cyberinfrastructure","display_name":"Cyberinfrastructure","score":0.7412513494491577},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.6406928896903992},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.5550557971000671},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5550183653831482},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.5012798309326172},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.4750635325908661},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4513669013977051},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.44311630725860596},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.21962064504623413},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1919824779033661},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.1581079363822937}],"concepts":[{"id":"https://openalex.org/C160145156","wikidata":"https://www.wikidata.org/wiki/Q778586","display_name":"Executable","level":2,"score":0.8545433282852173},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8270684480667114},{"id":"https://openalex.org/C2776397876","wikidata":"https://www.wikidata.org/wiki/Q1450531","display_name":"Cyberinfrastructure","level":2,"score":0.7412513494491577},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.6406928896903992},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.5550557971000671},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5550183653831482},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.5012798309326172},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.4750635325908661},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4513669013977051},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.44311630725860596},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.21962064504623413},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1919824779033661},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.1581079363822937},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/escience55777.2022.00044","is_oa":false,"landing_page_url":"https://doi.org/10.1109/escience55777.2022.00044","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE 18th International Conference on e-Science (e-Science)","raw_type":"proceedings-article"},{"id":"doi:10.5281/zenodo.7158096","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.7158096","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.5281/zenodo.7158096","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.7158096","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1788983601","display_name":null,"funder_award_id":"SIF160","funder_id":"https://openalex.org/F4320310536","funder_display_name":"University of Virginia"},{"id":"https://openalex.org/G6490865898","display_name":null,"funder_award_id":"VDH-21-501-0135-1","funder_id":"https://openalex.org/F4320308201","funder_display_name":"Virginia Department of Health"},{"id":"https://openalex.org/G7364925193","display_name":null,"funder_award_id":"OAC-1916805 (CINES),CCF-1918656 (Expeditions),CMMI-1916670 (CRISP 2.0)","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320308201","display_name":"Virginia Department of Health","ror":"https://ror.org/00j2wht38"},{"id":"https://openalex.org/F4320310536","display_name":"University of Virginia","ror":"https://ror.org/0153tk833"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":56,"referenced_works":["https://openalex.org/W63194056","https://openalex.org/W636256928","https://openalex.org/W1510118806","https://openalex.org/W1980868027","https://openalex.org/W2003998314","https://openalex.org/W2008191202","https://openalex.org/W2008620264","https://openalex.org/W2013307517","https://openalex.org/W2041157860","https://openalex.org/W2072004388","https://openalex.org/W2083494512","https://openalex.org/W2103821666","https://openalex.org/W2111780254","https://openalex.org/W2130863673","https://openalex.org/W2132022337","https://openalex.org/W2144244247","https://openalex.org/W2147694014","https://openalex.org/W2150208547","https://openalex.org/W2153373747","https://openalex.org/W2157312086","https://openalex.org/W2158882647","https://openalex.org/W2161728228","https://openalex.org/W2165159570","https://openalex.org/W2171018098","https://openalex.org/W2171707538","https://openalex.org/W2196673986","https://openalex.org/W2241934096","https://openalex.org/W2271096709","https://openalex.org/W2583249023","https://openalex.org/W2737573476","https://openalex.org/W2755088640","https://openalex.org/W2777447242","https://openalex.org/W2808776123","https://openalex.org/W2946696487","https://openalex.org/W2952099486","https://openalex.org/W2963794747","https://openalex.org/W3000277370","https://openalex.org/W3011345566","https://openalex.org/W3039395255","https://openalex.org/W3045337739","https://openalex.org/W3100352078","https://openalex.org/W3101739755","https://openalex.org/W3108953221","https://openalex.org/W3122926601","https://openalex.org/W3142588439","https://openalex.org/W3145724052","https://openalex.org/W4210817729","https://openalex.org/W4213449324","https://openalex.org/W4234112060","https://openalex.org/W4243300727","https://openalex.org/W6602506022","https://openalex.org/W6603542259","https://openalex.org/W6679191575","https://openalex.org/W6732062216","https://openalex.org/W6762975018","https://openalex.org/W6764969287"],"related_works":["https://openalex.org/W273500195","https://openalex.org/W2043019925","https://openalex.org/W4236056781","https://openalex.org/W4293768956","https://openalex.org/W2773781927","https://openalex.org/W2184477657","https://openalex.org/W90628286","https://openalex.org/W2602597272","https://openalex.org/W1491520229","https://openalex.org/W1495126611"],"abstract_inverted_index":{"Motivated":[0],"by":[1,89],"a":[2,18,79,100,106,137,164,186,191],"wide":[3],"range":[4],"of":[5,11,20,26,108,114,139,159,167],"applications,":[6],"research":[7],"on":[8,178],"agent-based":[9,34],"models":[10,35,91,109],"contagion":[12],"propagation":[13],"over":[14],"networks":[15,98,111,180],"has":[16],"attracted":[17],"lot":[19],"attention":[21],"in":[22,136],"the":[23,27,42,51,74,121,123,143,153,157,168,182],"literature.":[24],"Many":[25],"available":[28],"software":[29,68],"systems":[30],"for":[31,134,193],"simulating":[32],"such":[33],"require":[36,55],"users":[37,85,129],"to":[38,57,86,120,130,141,149],"download":[39],"software,":[40],"build":[41],"executable,":[43],"and":[44,76,92,97,110,116,148,161],"set":[45],"up":[46],"execution":[47],"environments.":[48],"Further,":[49],"running":[50],"resulting":[52],"executable":[53],"may":[54],"access":[56,67],"high":[58],"performance":[59,165],"computing":[60],"clusters.":[61],"Our":[62],"work":[63],"describes":[64],"an":[65],"open":[66],"system":[69,104,124],"(NetSimS)":[70],"that":[71,127],"works":[72],"under":[73],"\u201cModeling":[75],"Simulation":[77],"as":[78],"Service\u201d":[80],"(MSaaS)":[81],"paradigm.":[82],"It":[83],"enables":[84],"run":[87],"simulations":[88,135],"selecting":[90],"parameter":[93],"values,":[94],"initial":[95,132],"conditions,":[96],"through":[99,146],"web":[101],"interface.":[102],"The":[103],"supports":[105],"variety":[107,138],"with":[112],"millions":[113],"nodes":[115],"edges.":[117],"In":[118],"addition":[119],"simulator,":[122],"includes":[125],"components":[126,158],"enable":[128],"choose":[131],"conditions":[133],"ways,":[140],"analyze":[142],"data":[144],"generated":[145],"simulations,":[147],"produce":[150],"plots":[151],"from":[152],"data.":[154],"We":[155,170],"describe":[156],"NetSimS":[160,184],"carry":[162],"out":[163,177],"evaluation":[166],"system.":[169,183],"also":[171],"discuss":[172],"two":[173],"case":[174],"studies":[175],"carried":[176],"large":[179],"using":[181],"is":[185],"major":[187],"component":[188],"within":[189],"net.science,":[190],"cyberinfrastructure":[192],"network":[194],"science.":[195]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
