{"id":"https://openalex.org/W2594898507","doi":"https://doi.org/10.1109/escience.2016.7870915","title":"A parallel microsimulation package for modelling cancer screening policies","display_name":"A parallel microsimulation package for modelling cancer screening policies","publication_year":2016,"publication_date":"2016-10-01","ids":{"openalex":"https://openalex.org/W2594898507","doi":"https://doi.org/10.1109/escience.2016.7870915","mag":"2594898507"},"language":"en","primary_location":{"id":"doi:10.1109/escience.2016.7870915","is_oa":false,"landing_page_url":"https://doi.org/10.1109/escience.2016.7870915","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 IEEE 12th International Conference on e-Science (e-Science)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102890973","display_name":"Andreas Karlsson","orcid":"https://orcid.org/0000-0001-7932-8372"},"institutions":[{"id":"https://openalex.org/I4210103991","display_name":"Swedish e-Science Research Centre","ror":"https://ror.org/01e59yk92","country_code":"SE","type":"facility","lineage":["https://openalex.org/I4210103991"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Andreas Karlsson","raw_affiliation_strings":["Department of Medical Epidemiology and Biostatistics, Swedish e-Science Research Centre (SeRC), Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Medical Epidemiology and Biostatistics, Swedish e-Science Research Centre (SeRC), Stockholm, Sweden","institution_ids":["https://openalex.org/I4210103991"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091114017","display_name":"Niten Olofsson","orcid":null},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Niten Olofsson","raw_affiliation_strings":["Combitech AB, Stockholm, Sweden","Department of Neuroscience, Karolinska Institutet, Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"Combitech AB, Stockholm, Sweden","institution_ids":[]},{"raw_affiliation_string":"Department of Neuroscience, Karolinska Institutet, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011376663","display_name":"Erwin Laure","orcid":"https://orcid.org/0000-0002-9901-9857"},"institutions":[{"id":"https://openalex.org/I4210103991","display_name":"Swedish e-Science Research Centre","ror":"https://ror.org/01e59yk92","country_code":"SE","type":"facility","lineage":["https://openalex.org/I4210103991"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Erwin Laure","raw_affiliation_strings":["Center for High Performance Computing, Swedish e-Science Research Centre (SeRC), Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"Center for High Performance Computing, Swedish e-Science Research Centre (SeRC), Stockholm, Sweden","institution_ids":["https://openalex.org/I4210103991"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031302814","display_name":"Mark Clements","orcid":"https://orcid.org/0000-0003-4518-5670"},"institutions":[{"id":"https://openalex.org/I4210103991","display_name":"Swedish e-Science Research Centre","ror":"https://ror.org/01e59yk92","country_code":"SE","type":"facility","lineage":["https://openalex.org/I4210103991"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Mark Clements","raw_affiliation_strings":["Department of Medical Epidemiology and Biostatistics, Swedish e-Science Research Centre (SeRC), Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Medical Epidemiology and Biostatistics, Swedish e-Science Research Centre (SeRC), Stockholm, Sweden","institution_ids":["https://openalex.org/I4210103991"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5102890973"],"corresponding_institution_ids":["https://openalex.org/I4210103991"],"apc_list":null,"apc_paid":null,"fwci":1.4362,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.8585251,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"323","last_page":"330"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T14509","display_name":"demographic modeling and climate adaptation","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T14509","display_name":"demographic modeling and climate adaptation","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10804","display_name":"Health Systems, Economic Evaluations, Quality of Life","score":0.9284999966621399,"subfield":{"id":"https://openalex.org/subfields/2002","display_name":"Economics and Econometrics"},"field":{"id":"https://openalex.org/fields/20","display_name":"Economics, Econometrics and Finance"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10391","display_name":"Healthcare Policy and Management","score":0.9269999861717224,"subfield":{"id":"https://openalex.org/subfields/2002","display_name":"Economics and Econometrics"},"field":{"id":"https://openalex.org/fields/20","display_name":"Economics, Econometrics and Finance"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microsimulation","display_name":"Microsimulation","score":0.8509608507156372},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6418383121490479},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.3814769685268402},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.156459242105484},{"id":"https://openalex.org/keywords/transport-engineering","display_name":"Transport engineering","score":0.13243642449378967}],"concepts":[{"id":"https://openalex.org/C2780015235","wikidata":"https://www.wikidata.org/wiki/Q1934035","display_name":"Microsimulation","level":2,"score":0.8509608507156372},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6418383121490479},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.3814769685268402},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.156459242105484},{"id":"https://openalex.org/C22212356","wikidata":"https://www.wikidata.org/wiki/Q775325","display_name":"Transport engineering","level":1,"score":0.13243642449378967}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/escience.2016.7870915","is_oa":false,"landing_page_url":"https://doi.org/10.1109/escience.2016.7870915","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 IEEE 12th International Conference on e-Science (e-Science)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.7900000214576721}],"awards":[],"funders":[{"id":"https://openalex.org/F4320314239","display_name":"Netherlands eScience Center","ror":"https://ror.org/00rbjv475"},{"id":"https://openalex.org/F4320321491","display_name":"Cancerfonden","ror":"https://ror.org/0527jb766"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W31923072","https://openalex.org/W566030142","https://openalex.org/W940191183","https://openalex.org/W1563995344","https://openalex.org/W1575350781","https://openalex.org/W1793259860","https://openalex.org/W1988888548","https://openalex.org/W2015260142","https://openalex.org/W2029004113","https://openalex.org/W2080088297","https://openalex.org/W2082777924","https://openalex.org/W2100951779","https://openalex.org/W2112525087","https://openalex.org/W2112786970","https://openalex.org/W2113359186","https://openalex.org/W2122080175","https://openalex.org/W2122465391","https://openalex.org/W2140481308","https://openalex.org/W2142857718","https://openalex.org/W2149502453","https://openalex.org/W2159325249","https://openalex.org/W2171074980","https://openalex.org/W2191311785","https://openalex.org/W2992680164","https://openalex.org/W3099019570","https://openalex.org/W4399569044","https://openalex.org/W6634431598","https://openalex.org/W6676474364"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2125848125","https://openalex.org/W3123727641","https://openalex.org/W3121878008","https://openalex.org/W1566435679","https://openalex.org/W1642336094","https://openalex.org/W3200555808","https://openalex.org/W3124696916","https://openalex.org/W3124018320","https://openalex.org/W3125304264"],"abstract_inverted_index":{"Microsimulation":[0],"with":[1,36,43,53,191,224],"stochastic":[2],"life":[3],"histories":[4],"is":[5],"an":[6,33],"important":[7],"tool":[8],"in":[9,40,47,177,221,237],"the":[10,30,44,84,103,109,127,147,150,158,164,178,241,253,272],"development":[11],"of":[12,69,123,129,160,163,243,258],"public":[13],"policies.":[14],"In":[15,230],"this":[16,63,135,183],"article,":[17],"we":[18,65,171,232],"use":[19,128,142],"microsimulation":[20,51,179,235],"to":[21,141,185,250],"evaluate":[22],"policies":[23],"for":[24,121],"prostate":[25,174,188,244],"cancer":[26,175,189,245],"testing.":[27,206,229,246],"We":[28,181,207,247],"implemented":[29,172],"microsimulations":[31,254],"as":[32],"R":[34,41,110,116,131,238,259],"package,":[35],"pre-":[37],"and":[38,42,93,106,117,126,198,217,227,239,260],"post-processing":[39],"simulations":[45],"written":[46],"C++.":[48],"Calibrating":[49],"a":[50,54,95,168,173,214,218,234,256],"model":[52,176,184],"large":[55],"population":[56],"can":[57],"be":[58],"computationally":[59],"expensive.":[60],"To":[61],"address":[62],"issue,":[64],"investigated":[66],"four":[67],"forms":[68],"parallelism:":[70],"(i)":[71],"shared":[72,78,143,268],"memory":[73,79,89,98,144,269],"parallelism":[74,80,90,99,145,270],"using":[75,81,91,100,255,267],"R;":[76,92],"(ii)":[77],"OpenMP":[82,101],"at":[83,102,108,146,157,271],"C++":[85,104,118,148,273],"level;":[86],"(iii)":[87],"distributed":[88],"(iv)":[94],"hybrid":[96,154],"shared/distributed":[97],"level":[105],"MPI":[107],"level.":[111,274],"The":[112],"close":[113],"coupling":[114],"between":[115],"offered":[119],"advantages":[120],"ease":[122],"software":[124],"dissemination":[125],"high-level":[130],"parallelisation":[132],"methods.":[133],"However,":[134],"combination":[136,257],"brought":[137],"challenges":[138],"when":[139,266],"trying":[140],"level:":[149],"performance":[151],"gained":[152],"by":[153],"OpenMP/MPI":[155],"came":[156],"cost":[159],"significant":[161],"re-factoring":[162],"existing":[165],"code.":[166],"As":[167],"case":[169],"study,":[170],"package.":[180],"used":[182],"investigate":[186],"whether":[187],"testing":[190,211,226],"specific":[192],"re-testing":[193],"protocols":[194],"would":[195,212],"reduce":[196],"harms":[197],"maintain":[199],"any":[200],"mortality":[201],"benefit":[202],"from":[203],"prostate-specific":[204],"antigen":[205],"showed":[208],"that":[209],"four-yearly":[210],"have":[213],"comparable":[215],"effectiveness":[216],"marked":[219],"decrease":[220],"costs":[222],"compared":[223],"two-yearly":[225],"current":[228],"summary,":[231],"developed":[233],"package":[236],"assessed":[240],"cost-effectiveness":[242],"were":[248],"able":[249],"scale":[251],"up":[252],"C++,":[261],"however":[262],"care":[263],"was":[264],"required":[265]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
