{"id":"https://openalex.org/W2170044442","doi":"https://doi.org/10.1109/escience.2012.6404424","title":"BIGS: A framework for large-scale image processing and analysis over distributed and heterogeneous computing resources","display_name":"BIGS: A framework for large-scale image processing and analysis over distributed and heterogeneous computing resources","publication_year":2012,"publication_date":"2012-10-01","ids":{"openalex":"https://openalex.org/W2170044442","doi":"https://doi.org/10.1109/escience.2012.6404424","mag":"2170044442"},"language":"en","primary_location":{"id":"doi:10.1109/escience.2012.6404424","is_oa":false,"landing_page_url":"https://doi.org/10.1109/escience.2012.6404424","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE 8th International Conference on E-Science","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011088033","display_name":"Ra\u00fal Ramos-Poll\u00e1n","orcid":"https://orcid.org/0000-0001-6195-3612"},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":true,"raw_author_name":"Raul Ramos-Pollan","raw_affiliation_strings":["Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"affiliations":[{"raw_affiliation_string":"Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080973347","display_name":"Fabio A. Gonz\u00e1lez","orcid":"https://orcid.org/0000-0001-9009-7288"},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Fabio A. Gonzalez","raw_affiliation_strings":["Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"affiliations":[{"raw_affiliation_string":"Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030361802","display_name":"Juan Carlos Caicedo","orcid":"https://orcid.org/0000-0003-3936-6395"},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Juan C. Caicedo","raw_affiliation_strings":["Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"affiliations":[{"raw_affiliation_string":"Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072005501","display_name":"\u00c1ngel Cruz-Roa","orcid":"https://orcid.org/0000-0003-3389-8913"},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Angel Cruz-Roa","raw_affiliation_strings":["Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"affiliations":[{"raw_affiliation_string":"Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016045953","display_name":"Jorge E. Camargo","orcid":"https://orcid.org/0000-0002-3562-4441"},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Jorge E. Camargo","raw_affiliation_strings":["Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"affiliations":[{"raw_affiliation_string":"Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102750774","display_name":"Jorge A. Vanegas","orcid":"https://orcid.org/0000-0001-7774-3564"},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Jorge A. Vanegas","raw_affiliation_strings":["Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"affiliations":[{"raw_affiliation_string":"Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108537405","display_name":"Santiago A. P\u00e9rez","orcid":null},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Santiago A. Perez","raw_affiliation_strings":["Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"affiliations":[{"raw_affiliation_string":"Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053684313","display_name":"Jose David Bermeo","orcid":null},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Jose David Bermeo","raw_affiliation_strings":["Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"affiliations":[{"raw_affiliation_string":"Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064192718","display_name":"Juan Sebastian Otalora","orcid":null},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Juan Sebastian Otalora","raw_affiliation_strings":["Universidad Nacional de Colombia, Bogota, CO"],"affiliations":[{"raw_affiliation_string":"Universidad Nacional de Colombia, Bogota, CO","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072541944","display_name":"Paola K. Rozo","orcid":null},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Paola K. Rozo","raw_affiliation_strings":["Universidad Nacional de Colombia, Bogota, CO"],"affiliations":[{"raw_affiliation_string":"Universidad Nacional de Colombia, Bogota, CO","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030925233","display_name":"John Ar\u00e9valo","orcid":"https://orcid.org/0000-0002-1138-5036"},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"John E. Arevalo","raw_affiliation_strings":["Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"affiliations":[{"raw_affiliation_string":"Bioingenium Research Group at Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5011088033"],"corresponding_institution_ids":["https://openalex.org/I36243813"],"apc_list":null,"apc_paid":null,"fwci":2.1832,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.8731935,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":0.9751999974250793,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":0.9751999974250793,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11992","display_name":"CCD and CMOS Imaging Sensors","score":0.972000002861023,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10627","display_name":"Advanced Image and Video Retrieval Techniques","score":0.9621999859809875,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8774851560592651},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.7555880546569824},{"id":"https://openalex.org/keywords/utility-computing","display_name":"Utility computing","score":0.5711395144462585},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.5663633346557617},{"id":"https://openalex.org/keywords/provisioning","display_name":"Provisioning","score":0.5603402853012085},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.557293176651001},{"id":"https://openalex.org/keywords/grid-computing","display_name":"Grid computing","score":0.5115288496017456},{"id":"https://openalex.org/keywords/schedule","display_name":"Schedule","score":0.4545229971408844},{"id":"https://openalex.org/keywords/java","display_name":"Java","score":0.44957882165908813},{"id":"https://openalex.org/keywords/scheduling","display_name":"Scheduling (production processes)","score":0.4420982599258423},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.41095873713493347},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.26003408432006836},{"id":"https://openalex.org/keywords/cloud-computing-security","display_name":"Cloud computing security","score":0.20613908767700195},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.20022332668304443},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.17755931615829468}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8774851560592651},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.7555880546569824},{"id":"https://openalex.org/C85106507","wikidata":"https://www.wikidata.org/wiki/Q1188445","display_name":"Utility computing","level":4,"score":0.5711395144462585},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.5663633346557617},{"id":"https://openalex.org/C172191483","wikidata":"https://www.wikidata.org/wiki/Q1071806","display_name":"Provisioning","level":2,"score":0.5603402853012085},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.557293176651001},{"id":"https://openalex.org/C70429105","wikidata":"https://www.wikidata.org/wiki/Q249999","display_name":"Grid computing","level":3,"score":0.5115288496017456},{"id":"https://openalex.org/C68387754","wikidata":"https://www.wikidata.org/wiki/Q7271585","display_name":"Schedule","level":2,"score":0.4545229971408844},{"id":"https://openalex.org/C548217200","wikidata":"https://www.wikidata.org/wiki/Q251","display_name":"Java","level":2,"score":0.44957882165908813},{"id":"https://openalex.org/C206729178","wikidata":"https://www.wikidata.org/wiki/Q2271896","display_name":"Scheduling (production processes)","level":2,"score":0.4420982599258423},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.41095873713493347},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.26003408432006836},{"id":"https://openalex.org/C184842701","wikidata":"https://www.wikidata.org/wiki/Q370563","display_name":"Cloud computing security","level":3,"score":0.20613908767700195},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.20022332668304443},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.17755931615829468},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/escience.2012.6404424","is_oa":false,"landing_page_url":"https://doi.org/10.1109/escience.2012.6404424","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE 8th International Conference on E-Science","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.4000000059604645,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320309955","display_name":"Departamento Administrativo de Ciencia, Tecnolog\u00eda e Innovaci\u00f3n (COLCIENCIAS)","ror":"https://ror.org/048jthh02"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W55726820","https://openalex.org/W1494137514","https://openalex.org/W1505837402","https://openalex.org/W1562464101","https://openalex.org/W1975103383","https://openalex.org/W1981420413","https://openalex.org/W1986553481","https://openalex.org/W1986966222","https://openalex.org/W2033311794","https://openalex.org/W2037801643","https://openalex.org/W2040414046","https://openalex.org/W2057230078","https://openalex.org/W2073985768","https://openalex.org/W2113180829","https://openalex.org/W2123491442","https://openalex.org/W2136773811","https://openalex.org/W2150871235","https://openalex.org/W2154917588","https://openalex.org/W2162915993","https://openalex.org/W2163502583","https://openalex.org/W2166934660","https://openalex.org/W2296009866","https://openalex.org/W2495773921","https://openalex.org/W2624304035","https://openalex.org/W3099404130","https://openalex.org/W6602290429","https://openalex.org/W6738874634"],"related_works":["https://openalex.org/W2337331320","https://openalex.org/W2359083166","https://openalex.org/W4297792185","https://openalex.org/W1585052355","https://openalex.org/W4322712946","https://openalex.org/W2125771852","https://openalex.org/W2363418456","https://openalex.org/W2992164351","https://openalex.org/W2244169916","https://openalex.org/W1496730055"],"abstract_inverted_index":{"This":[0,144,211,311],"paper":[1,316],"presents":[2],"BIGS":[3,129,165,269,278,319],"the":[4,67,134,146,178,188,256,259,297,325],"Big":[5],"Image":[6],"Data":[7],"Analysis":[8],"Toolkit,":[9],"a":[10,97,102,149,160,250],"software":[11],"framework":[12],"for":[13,47,148,271],"large":[14,284],"scale":[15,285],"image":[16,48,93,286],"processing":[17,49,94,287],"and":[18,50,63,108,204,273,293,328,337],"analysis":[19,51],"over":[20,116,177,192,301],"heterogeneous":[21],"computing":[22,77,180,223,229,235,302],"resources,":[23,195],"such":[24],"as":[25,111,119,121,304],"those":[26],"available":[27,179,307],"in":[28,40,96,245,289,314,320,324,329],"clouds,":[29],"grids,":[30],"computer":[31,36,203],"clusters":[32,224],"or":[33,208,225,231,241],"throughout":[34],"scattered":[35],"resources":[37,236,303],"(desktops,":[38],"labs)":[39],"an":[41,83,290,330],"opportunistic":[42,234,331],"manner.":[43],"Through":[44],"BIGS,":[45],"eScience":[46],"is":[52,106,127,239,312],"conceived":[53],"to":[54,137,141,159,172,254,282,299],"exploit":[55],"coarse":[56],"grained":[57],"parallelism":[58],"based":[59],"on":[60,124],"data":[61],"partitioning":[62],"parameter":[64],"sweeps,":[65],"avoiding":[66],"need":[68,147],"of":[69,104,216,258],"inter-process":[70],"communication":[71],"and,":[72],"therefore,":[73],"enabling":[74],"loosely":[75],"coupled":[76],"nodes":[78],"(BIGS":[79],"workers).":[80],"It":[81],"adopts":[82],"uncommitted":[84],"resource":[85],"allocation":[86],"model":[87,253],"where":[88],"(1)":[89],"experimenters":[90],"define":[91],"their":[92,122,174,193],"pipelines":[95,288],"simple":[98],"configuration":[99],"file,":[100],"(2)":[101],"schedule":[103,136],"jobs":[105,118,126],"generated":[107],"(3)":[109],"workers,":[110,266],"they":[112,183,305],"become":[113,306],"available,":[114],"take":[115,142,300],"pending":[117],"long":[120],"dependency":[123],"other":[125],"fulfilled.":[128],"workers":[130,158,166],"act":[131],"autonomously,":[132],"querying":[133],"job":[135],"determine":[138],"which":[139],"one":[140],"over.":[143],"removes":[145],"central":[150],"scheduling":[151],"node,":[152],"requiring":[153],"only":[154],"access":[155,238],"by":[156,264,317],"all":[157,265],"shared":[161,260],"information":[162,261],"source.":[163],"Furthermore,":[164],"are":[167],"encapsulated":[168],"within":[169,268],"different":[170,214,321],"technologies":[171],"enable":[173],"agile":[175],"deployment":[176],"resources.":[181],"Currently":[182],"can":[184],"be":[185,243],"launched":[186],"through":[187,196,205],"Amazon":[189,326],"EC2":[190],"service":[191],"cloud":[194,327],"Java":[197],"Web":[198],"Start":[199],"from":[200],"any":[201],"desktop":[202],"regular":[206],"scripting":[207],"SSH":[209],"commands.":[210],"suits":[212],"well":[213],"kinds":[215],"research":[217],"environments,":[218],"both":[219],"when":[220,232],"accessing":[221],"dedicated":[222],"clouds":[226],"with":[227,296],"committed":[228],"capacity":[230],"using":[233,318],"whose":[237],"seldom":[240],"cannot":[242],"provisioned":[244],"advance.":[246],"We":[247],"also":[248],"adopt":[249],"NoSQL":[251],"storage":[252],"ensure":[255],"scalability":[257,338],"sources":[262],"required":[263],"including":[267],"support":[270],"HBase":[272],"Amazon's":[274],"DynamoDB":[275],"service.":[276],"Overall,":[277],"now":[279],"enables":[280],"researchers":[281],"run":[283,309],"easy,":[291],"affordable":[292],"unplanned":[294],"manner":[295],"capability":[298],"at":[308],"time.":[310],"shown":[313],"this":[315],"experimental":[322],"setups":[323],"manner,":[332],"demonstrating":[333],"its":[334],"configurability,":[335],"adaptability":[336],"capabilities.":[339]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
