{"id":"https://openalex.org/W4405489419","doi":"https://doi.org/10.1109/embc53108.2024.10781901","title":"Rat Tongue Kinematics with Markerless XROMM Using DeepLabCut and Marker Masking","display_name":"Rat Tongue Kinematics with Markerless XROMM Using DeepLabCut and Marker Masking","publication_year":2024,"publication_date":"2024-07-15","ids":{"openalex":"https://openalex.org/W4405489419","doi":"https://doi.org/10.1109/embc53108.2024.10781901","pmid":"https://pubmed.ncbi.nlm.nih.gov/40040217"},"language":"en","primary_location":{"id":"doi:10.1109/embc53108.2024.10781901","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc53108.2024.10781901","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090197484","display_name":"Philipp Flotho","orcid":"https://orcid.org/0000-0002-8480-0085"},"institutions":[{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Philipp Flotho","raw_affiliation_strings":["Saarland University Hospital,Systems Neuroscience and Neurotechnology Unit Neurocenter,Homburg/Saar,Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Saarland University Hospital,Systems Neuroscience and Neurotechnology Unit Neurocenter,Homburg/Saar,Germany","institution_ids":["https://openalex.org/I91712215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002175349","display_name":"Mohamed El\u2010Tabbal","orcid":"https://orcid.org/0000-0002-5926-1083"},"institutions":[{"id":"https://openalex.org/I142637625","display_name":"Okinawa Institute of Science and Technology Graduate University","ror":"https://ror.org/02qg15b79","country_code":"JP","type":"education","lineage":["https://openalex.org/I142637625"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Mohamed El-Tabbal","raw_affiliation_strings":["Okinawa Institute of Science and Technology,Optical Neuroimaging Unit,Okinawa,Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Okinawa Institute of Science and Technology,Optical Neuroimaging Unit,Okinawa,Japan","institution_ids":["https://openalex.org/I142637625"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002972490","display_name":"Teresa E. Lever","orcid":"https://orcid.org/0000-0002-5587-3816"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Teresa E. Lever","raw_affiliation_strings":["University of Missouri School of Medicine,Otolaryngology-Head and Neck Surgery,Columbia,MO,U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Missouri School of Medicine,Otolaryngology-Head and Neck Surgery,Columbia,MO,U.S.A","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081259465","display_name":"Kazutaka Takahashi","orcid":"https://orcid.org/0000-0001-7679-0430"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kazutaka Takahashi","raw_affiliation_strings":["University of Missouri,Department of Speech, Language and Hearing Science College of Health Sciences,Columbia,MO,U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Missouri,Department of Speech, Language and Hearing Science College of Health Sciences,Columbia,MO,U.S.A","institution_ids":["https://openalex.org/I76835614"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.2629,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.59222595,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"2024","issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10812","display_name":"Human Pose and Action Recognition","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10812","display_name":"Human Pose and Action Recognition","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11398","display_name":"Hand Gesture Recognition Systems","score":0.91839998960495,"subfield":{"id":"https://openalex.org/subfields/1709","display_name":"Human-Computer Interaction"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10879","display_name":"Robotic Locomotion and Control","score":0.9107000231742859,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/kinematics","display_name":"Kinematics","score":0.7085919976234436},{"id":"https://openalex.org/keywords/masking","display_name":"Masking (illustration)","score":0.6536640524864197},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6118379831314087},{"id":"https://openalex.org/keywords/tongue","display_name":"Tongue","score":0.5702387690544128},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4677237272262573},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4370894134044647},{"id":"https://openalex.org/keywords/speech-recognition","display_name":"Speech recognition","score":0.4021183252334595},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.3273165225982666},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.18051499128341675},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1506395936012268},{"id":"https://openalex.org/keywords/art","display_name":"Art","score":0.13901904225349426},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.04750010371208191}],"concepts":[{"id":"https://openalex.org/C39920418","wikidata":"https://www.wikidata.org/wiki/Q11476","display_name":"Kinematics","level":2,"score":0.7085919976234436},{"id":"https://openalex.org/C2777402240","wikidata":"https://www.wikidata.org/wiki/Q6783436","display_name":"Masking (illustration)","level":2,"score":0.6536640524864197},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6118379831314087},{"id":"https://openalex.org/C2779744641","wikidata":"https://www.wikidata.org/wiki/Q9614","display_name":"Tongue","level":2,"score":0.5702387690544128},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4677237272262573},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4370894134044647},{"id":"https://openalex.org/C28490314","wikidata":"https://www.wikidata.org/wiki/Q189436","display_name":"Speech recognition","level":1,"score":0.4021183252334595},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.3273165225982666},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.18051499128341675},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1506395936012268},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.13901904225349426},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.04750010371208191},{"id":"https://openalex.org/C74650414","wikidata":"https://www.wikidata.org/wiki/Q11397","display_name":"Classical mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001696","descriptor_name":"Biomechanical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001696","descriptor_name":"Biomechanical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001696","descriptor_name":"Biomechanical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014059","descriptor_name":"Tongue","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D014059","descriptor_name":"Tongue","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D014059","descriptor_name":"Tongue","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D014059","descriptor_name":"Tongue","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D014059","descriptor_name":"Tongue","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D014059","descriptor_name":"Tongue","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/embc53108.2024.10781901","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc53108.2024.10781901","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:40040217","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40040217","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320337365","display_name":"National Institute of Dental and Craniofacial Research","ror":"https://ror.org/004a2wv92"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W2522871203","https://openalex.org/W2756137925","https://openalex.org/W2887114371","https://openalex.org/W2950100524","https://openalex.org/W3042972721","https://openalex.org/W3204715535","https://openalex.org/W6803376173"],"related_works":["https://openalex.org/W3136794468","https://openalex.org/W2367950022","https://openalex.org/W2789522126","https://openalex.org/W2066693961","https://openalex.org/W2368363778","https://openalex.org/W122584421","https://openalex.org/W4244295168","https://openalex.org/W2365707941","https://openalex.org/W2366141844","https://openalex.org/W2383946220"],"abstract_inverted_index":{"X-ray":[0],"Reconstruction":[1],"of":[2,9,35,95,127,144],"Moving":[3],"Morphology":[4],"(XROMM)":[5],"enables":[6],"3D":[7,97],"tracking":[8,112],"implanted":[10],"radiopaque":[11],"markers":[12,48,99,135],"in":[13,33,100,153],"animals":[14],"to":[15,62,71,84,88,110,147],"study":[16],"biomechanics.":[17],"In":[18],"recent":[19],"years,":[20],"DeepLabCut":[21],"(DLC)":[22],"has":[23,59],"emerged":[24],"as":[25,40],"an":[26,142],"important":[27],"tool":[28],"for":[29,92],"markerless":[30],"pose":[31,121],"estimation":[32,122],"areas":[34],"the":[36,46,72,93],"biological":[37],"sciences":[38],"such":[39],"neuroscience":[41],"or":[42],"behavioral":[43],"research.":[44],"While":[45],"XROMM":[47,98,120],"can":[49],"be":[50],"detected":[51],"and":[52,76,117,130],"tracked":[53],"using":[54],"traditional":[55],"image":[56],"processing,":[57],"DLC":[58],"been":[60],"proven":[61],"improve":[63],"XMALab-based":[64],"workflows.":[65],"However,":[66],"those":[67],"methods":[68],"are":[69,77],"prone":[70],"exact":[73],"marker":[74,107,115],"positions":[75],"not":[78],"robust":[79],"concerning":[80],"missing":[81],"markers.We":[82],"propose":[83,105],"use":[85],"XMALab":[86],"results":[87],"reconstruct":[89],"camera":[90],"calibrations":[91],"prediction":[94],"DLC-guided":[96],"videofluoroscopic":[101],"data.":[102],"Additionally,":[103],"we":[104,139],"a":[106,154],"masking":[108],"augmentation":[109],"enable":[111],"with":[113,125],"incomplete":[114],"sets":[116],"demonstrate":[118],"that":[119],"is":[123],"possible":[124],"subsets":[126],"visible":[128,134],"beads":[129],"even":[131],"without":[132,136],"any":[133],"sacrificing":[137],"accuracy.":[138],"further":[140],"show":[141],"implementation":[143],"this":[145],"method":[146],"extract":[148],"tongue":[149,159],"kinematic":[150],"patterns,":[151],"resulting":[152],"novel":[155],"insight":[156],"into":[157],"rodent":[158],"behavior":[160],"during":[161],"natural":[162],"feeding":[163],"behavior.":[164]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
