{"id":"https://openalex.org/W4294975184","doi":"https://doi.org/10.1109/embc48229.2022.9871758","title":"Multi-agent Feature Selection for Integrative Multi-omics Analysis","display_name":"Multi-agent Feature Selection for Integrative Multi-omics Analysis","publication_year":2022,"publication_date":"2022-07-11","ids":{"openalex":"https://openalex.org/W4294975184","doi":"https://doi.org/10.1109/embc48229.2022.9871758","pmid":"https://pubmed.ncbi.nlm.nih.gov/36086594"},"language":"en","primary_location":{"id":"doi:10.1109/embc48229.2022.9871758","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc48229.2022.9871758","pdf_url":null,"source":{"id":"https://openalex.org/S4363607706","display_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077160944","display_name":"Sina Tabakhi","orcid":"https://orcid.org/0000-0002-3075-7907"},"institutions":[{"id":"https://openalex.org/I91136226","display_name":"University of Sheffield","ror":"https://ror.org/05krs5044","country_code":"GB","type":"education","lineage":["https://openalex.org/I91136226"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Sina Tabakhi","raw_affiliation_strings":["University of Sheffield,Department of Computer Science,United Kingdom","Department of Computer Science, University of Sheffield, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Sheffield,Department of Computer Science,United Kingdom","institution_ids":["https://openalex.org/I91136226"]},{"raw_affiliation_string":"Department of Computer Science, University of Sheffield, United Kingdom","institution_ids":["https://openalex.org/I91136226"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009807039","display_name":"Haiping Lu","orcid":"https://orcid.org/0000-0002-0349-2181"},"institutions":[{"id":"https://openalex.org/I91136226","display_name":"University of Sheffield","ror":"https://ror.org/05krs5044","country_code":"GB","type":"education","lineage":["https://openalex.org/I91136226"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Haiping Lu","raw_affiliation_strings":["University of Sheffield,Department of Computer Science,United Kingdom","Department of Computer Science, University of Sheffield, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Sheffield,Department of Computer Science,United Kingdom","institution_ids":["https://openalex.org/I91136226"]},{"raw_affiliation_string":"Department of Computer Science, University of Sheffield, United Kingdom","institution_ids":["https://openalex.org/I91136226"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I91136226"],"apc_list":null,"apc_paid":null,"fwci":3.1111,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.91316794,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"12","issue":null,"first_page":"1638","last_page":"1642"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.7695121765136719},{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.7310079336166382},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7024773955345154},{"id":"https://openalex.org/keywords/curse-of-dimensionality","display_name":"Curse of dimensionality","score":0.5708860158920288},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.49439382553100586},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4679105877876282},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.4512079656124115},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.4427809715270996},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.427262544631958},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.34757840633392334},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.27003389596939087},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.0865943431854248}],"concepts":[{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.7695121765136719},{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.7310079336166382},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7024773955345154},{"id":"https://openalex.org/C111030470","wikidata":"https://www.wikidata.org/wiki/Q1430460","display_name":"Curse of dimensionality","level":2,"score":0.5708860158920288},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.49439382553100586},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4679105877876282},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.4512079656124115},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.4427809715270996},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.427262544631958},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34757840633392334},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.27003389596939087},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0865943431854248},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010051","descriptor_name":"Ovarian Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010051","descriptor_name":"Ovarian Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010051","descriptor_name":"Ovarian Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1109/embc48229.2022.9871758","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc48229.2022.9871758","pdf_url":null,"source":{"id":"https://openalex.org/S4363607706","display_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:36086594","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36086594","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null},{"id":"pmh:oai:eprints.whiterose.ac.uk:186602","is_oa":false,"landing_page_url":"https://eprints.whiterose.ac.uk/186602/1/Haiping%20Lu%20OA%20MAgentOmics_EMBC_2022.pdf","pdf_url":"https://eprints.whiterose.ac.uk/186602/1/Haiping%20Lu%20OA%20MAgentOmics_EMBC_2022.pdf","source":{"id":"https://openalex.org/S4306400854","display_name":"White Rose Research Online (University of Leeds, The University of Sheffield, University of York)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2800616092","host_organization_name":"White Rose University Consortium","host_organization_lineage":["https://openalex.org/I2800616092"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Proceedings Paper"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Peace, Justice and strong institutions","score":0.75,"id":"https://metadata.un.org/sdg/16"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W254399443","https://openalex.org/W1580022276","https://openalex.org/W2010773093","https://openalex.org/W2025183726","https://openalex.org/W2093010752","https://openalex.org/W2101234009","https://openalex.org/W2106393550","https://openalex.org/W2118527670","https://openalex.org/W2229848011","https://openalex.org/W2911964244","https://openalex.org/W2921485464","https://openalex.org/W2922701384","https://openalex.org/W2953073515","https://openalex.org/W2979470587","https://openalex.org/W3081918787","https://openalex.org/W3083907318","https://openalex.org/W3085172652","https://openalex.org/W3112212292","https://openalex.org/W3120515035","https://openalex.org/W3134930606","https://openalex.org/W3139601120","https://openalex.org/W3170986249","https://openalex.org/W3173875945","https://openalex.org/W3176966473","https://openalex.org/W3213224786","https://openalex.org/W4200037356","https://openalex.org/W4200056311","https://openalex.org/W6675354045"],"related_works":["https://openalex.org/W4386564352","https://openalex.org/W2952668426","https://openalex.org/W2924366642","https://openalex.org/W4392558563","https://openalex.org/W3173875945","https://openalex.org/W3159101980","https://openalex.org/W2966125521","https://openalex.org/W3003192283","https://openalex.org/W2996736193","https://openalex.org/W2909364225"],"abstract_inverted_index":{"Multiomics":[0],"data":[1,21,65,84,148],"integration":[2,161],"is":[3,109,165,176],"key":[4],"for":[5,32,75],"cancer":[6,34,146],"prediction":[7,35,119],"as":[8,122,132],"it":[9,128],"captures":[10],"different":[11],"aspects":[12],"of":[13,19,27,49,51,63,125,140,163,197],"molecular":[14],"mechanisms.":[15],"Nevertheless,":[16],"the":[17,33,47,88,113,138,143,160,169,194,203],"high-dimensionality":[18],"multi-omics":[20,52,94,147,187],"with":[22],"a":[23,30,72,105,153],"relatively":[24,166],"small":[25],"number":[26],"patients":[28,151],"presents":[29],"challenge":[31],"tasks.":[36],"While":[37],"feature":[38,76,115,191],"selection":[39,192],"techniques":[40],"have":[41,57],"been":[42,58],"widely":[43],"used":[44],"to":[45,60,80,93,111],"tackle":[46],"curse":[48],"dimensionality":[50],"data,":[53,95],"most":[54],"existing":[55,186],"methods":[56],"applied":[59],"each":[61],"type":[62],"omics":[64,83],"separately.":[66],"In":[67],"this":[68],"paper,":[69],"we":[70],"propose":[71],"multi-agent":[73],"architecture":[74],"selection,":[77],"called":[78],"MAgentOmics,":[79],"consider":[81],"all":[82],"together.":[85],"MAgentOmics":[86,141,164],"extends":[87],"ant":[89],"colony":[90],"optimization":[91],"algorithm":[92],"which":[96],"iteratively":[97],"builds":[98],"candidate":[99,114],"solutions":[100],"and":[101,199],"evaluates":[102],"them.":[103],"Moreover,":[104],"new":[106],"fitness":[107],"function":[108],"introduced":[110],"assess":[112],"subsets":[116],"without":[117],"using":[118,152],"target":[120],"such":[121],"survival":[123],"time":[124],"patients.":[126],"Therefore,":[127],"can":[129],"be":[130],"considered":[131],"an":[133],"unsupervised":[134],"method.":[135,173],"We":[136],"evaluate":[137],"performance":[139],"on":[142],"TCGA":[144],"ovarian":[145],"from":[149],"176":[150],"5-fold":[154],"cross-validation.":[155],"The":[156,174],"results":[157],"demonstrate":[158],"that":[159],"power":[162],"better":[167,190],"than":[168],"state-of-the-art":[170],"supervised":[171],"multi-view":[172],"code":[175],"publicly":[177],"available":[178],"at":[179],"https://github.com/SinaTabakhi/MAgentOmics.":[180],"Clinical":[181],"relevance-":[182],"Discovering":[183],"knowledge":[184],"in":[185,202],"datasets":[188],"through":[189],"enhances":[193],"clinical":[195],"understanding":[196],"cancers":[198],"speeds-up":[200],"decision-making":[201],"clinic.":[204]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
