{"id":"https://openalex.org/W4295510573","doi":"https://doi.org/10.1109/embc48229.2022.9871498","title":"A Molecular Dynamics Model for Biomedical Sensor Evaluation: Nanoscale Numerical Simulation of an Aluminum-Based Biosensor","display_name":"A Molecular Dynamics Model for Biomedical Sensor Evaluation: Nanoscale Numerical Simulation of an Aluminum-Based Biosensor","publication_year":2022,"publication_date":"2022-07-11","ids":{"openalex":"https://openalex.org/W4295510573","doi":"https://doi.org/10.1109/embc48229.2022.9871498","pmid":"https://pubmed.ncbi.nlm.nih.gov/36086108"},"language":"en","primary_location":{"id":"doi:10.1109/embc48229.2022.9871498","is_oa":true,"landing_page_url":"https://doi.org/10.1109/embc48229.2022.9871498","pdf_url":"https://ieeexplore.ieee.org/ielx7/9870821/9870822/09871498.pdf","source":{"id":"https://openalex.org/S4363607706","display_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ieeexplore.ieee.org/ielx7/9870821/9870822/09871498.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036564652","display_name":"Fatemeh Shahbazi","orcid":"https://orcid.org/0000-0001-9326-1741"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Fatemeh Shahbazi","raw_affiliation_strings":["University of Manchester,department of mechanical, aerospace, and civil engineering,Manchester,United Kingdom,M17DN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Manchester,department of mechanical, aerospace, and civil engineering,Manchester,United Kingdom,M17DN","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064660976","display_name":"Mohammad Nasr Esfahani","orcid":"https://orcid.org/0000-0002-6973-2205"},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mohammad Nasr Esfahani","raw_affiliation_strings":["University of York,department of Electronics,York,United Kingdom","department of Electronics, University of York, York, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of York,department of Electronics,York,United Kingdom","institution_ids":["https://openalex.org/I52099693"]},{"raw_affiliation_string":"department of Electronics, University of York, York, United Kingdom","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036083160","display_name":"Masoud Jabbari","orcid":"https://orcid.org/0000-0003-3615-969X"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Masoud Jabbari","raw_affiliation_strings":["University of Manchester,department of mechanical, aerospace and civil engineering,Manchester,United Kingdom,M17DN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Manchester,department of mechanical, aerospace and civil engineering,Manchester,United Kingdom,M17DN","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054937666","display_name":"Amir Keshmiri","orcid":"https://orcid.org/0000-0003-4747-277X"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Amir Keshmiri","raw_affiliation_strings":["University of Manchester,department of mechanical, aerospace and civil engineering,Manchester,United Kingdom,M17DN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Manchester,department of mechanical, aerospace and civil engineering,Manchester,United Kingdom,M17DN","institution_ids":["https://openalex.org/I28407311"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.0741,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.87418212,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"2022","issue":null,"first_page":"613","last_page":"616"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10913","display_name":"Molecular Junctions and Nanostructures","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11272","display_name":"Nanowire Synthesis and Applications","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biosensor","display_name":"Biosensor","score":0.9545695185661316},{"id":"https://openalex.org/keywords/nanotechnology","display_name":"Nanotechnology","score":0.6255815029144287},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.5432440638542175},{"id":"https://openalex.org/keywords/nanoscopic-scale","display_name":"Nanoscopic scale","score":0.5212726593017578},{"id":"https://openalex.org/keywords/adsorption","display_name":"Adsorption","score":0.4961467683315277},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.43838974833488464},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.20618200302124023}],"concepts":[{"id":"https://openalex.org/C160756335","wikidata":"https://www.wikidata.org/wiki/Q669391","display_name":"Biosensor","level":2,"score":0.9545695185661316},{"id":"https://openalex.org/C171250308","wikidata":"https://www.wikidata.org/wiki/Q11468","display_name":"Nanotechnology","level":1,"score":0.6255815029144287},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.5432440638542175},{"id":"https://openalex.org/C45206210","wikidata":"https://www.wikidata.org/wiki/Q2415817","display_name":"Nanoscopic scale","level":2,"score":0.5212726593017578},{"id":"https://openalex.org/C150394285","wikidata":"https://www.wikidata.org/wiki/Q180254","display_name":"Adsorption","level":2,"score":0.4961467683315277},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43838974833488464},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.20618200302124023},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000535","descriptor_name":"Aluminum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000535","descriptor_name":"Aluminum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000535","descriptor_name":"Aluminum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015374","descriptor_name":"Biosensing Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D015374","descriptor_name":"Biosensing Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D015374","descriptor_name":"Biosensing Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D036103","descriptor_name":"Nanotechnology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D036103","descriptor_name":"Nanotechnology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D036103","descriptor_name":"Nanotechnology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049329","descriptor_name":"Nanostructures","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D049329","descriptor_name":"Nanostructures","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D049329","descriptor_name":"Nanostructures","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1109/embc48229.2022.9871498","is_oa":true,"landing_page_url":"https://doi.org/10.1109/embc48229.2022.9871498","pdf_url":"https://ieeexplore.ieee.org/ielx7/9870821/9870822/09871498.pdf","source":{"id":"https://openalex.org/S4363607706","display_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:36086108","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36086108","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire/9ae01afc-8a9b-47ce-b930-79b7145849a0","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/9ae01afc-8a9b-47ce-b930-79b7145849a0","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:eprints.whiterose.ac.uk:194272","is_oa":false,"landing_page_url":"https://eprints.whiterose.ac.uk/194272/1/A_Molecular_Dynamics_Model_for_Biomedical_Sensor_Evaluation_Nanoscale_Numerical_Simulation_of_an_Aluminum-Based_Biosensor.pdf","pdf_url":"https://eprints.whiterose.ac.uk/194272/1/A_Molecular_Dynamics_Model_for_Biomedical_Sensor_Evaluation_Nanoscale_Numerical_Simulation_of_an_Aluminum-Based_Biosensor.pdf","source":{"id":"https://openalex.org/S4306400854","display_name":"White Rose Research Online (University of Leeds, The University of Sheffield, University of York)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2800616092","host_organization_name":"White Rose University Consortium","host_organization_lineage":["https://openalex.org/I2800616092"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Proceedings Paper"},{"id":"pmh:oai:wrap.warwick.ac.uk:171481","is_oa":false,"landing_page_url":"https://wrap.warwick.ac.uk/171481/1/A_Molecular_Dynamics_Model_for_Biomedical_Sensor_Evaluation_Nanoscale_Numerical_Simulation_of_an_Aluminum-Based_Biosensor.pdf","pdf_url":"https://wrap.warwick.ac.uk/171481/1/A_Molecular_Dynamics_Model_for_Biomedical_Sensor_Evaluation_Nanoscale_Numerical_Simulation_of_an_Aluminum-Based_Biosensor.pdf","source":{"id":"https://openalex.org/S4306400665","display_name":"Warwick Research Archive Portal (University of Warwick)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I39555362","host_organization_name":"University of Warwick","host_organization_lineage":["https://openalex.org/I39555362"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Conference Item"},{"id":"pmh:oai:eprints.whiterose.ac.uk:191092","is_oa":false,"landing_page_url":"https://orcid.org/0000-0002-6973-2205>,","pdf_url":null,"source":{"id":"https://openalex.org/S4306400854","display_name":"White Rose Research Online (University of Leeds, The University of Sheffield, University of York)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2800616092","host_organization_name":"White Rose University Consortium","host_organization_lineage":["https://openalex.org/I2800616092"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"Proceedings Paper"},{"id":"pmh:oai:pure.atira.dk:publications/9ae01afc-8a9b-47ce-b930-79b7145849a0","is_oa":true,"landing_page_url":"http://www.scopus.com/inward/record.url?scp=85138126846&partnerID=8YFLogxK","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":{"id":"doi:10.1109/embc48229.2022.9871498","is_oa":true,"landing_page_url":"https://doi.org/10.1109/embc48229.2022.9871498","pdf_url":"https://ieeexplore.ieee.org/ielx7/9870821/9870822/09871498.pdf","source":{"id":"https://openalex.org/S4363607706","display_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320291","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4295510573.pdf","grobid_xml":"https://content.openalex.org/works/W4295510573.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1967284026","https://openalex.org/W2016325227","https://openalex.org/W2035266068","https://openalex.org/W2044028691","https://openalex.org/W2048516740","https://openalex.org/W2065251521","https://openalex.org/W2330672314","https://openalex.org/W2333787883","https://openalex.org/W2560531000","https://openalex.org/W2761254125","https://openalex.org/W2779214818","https://openalex.org/W2883068098","https://openalex.org/W2890504692","https://openalex.org/W2905138337","https://openalex.org/W2910757913","https://openalex.org/W2966130678","https://openalex.org/W3048507174","https://openalex.org/W3048842479","https://openalex.org/W3081483134","https://openalex.org/W3092051904","https://openalex.org/W3095055250","https://openalex.org/W4250215198"],"related_works":["https://openalex.org/W2046430340","https://openalex.org/W2322026400","https://openalex.org/W2383021773","https://openalex.org/W1990396141","https://openalex.org/W4206515393","https://openalex.org/W2056670287","https://openalex.org/W1929958295","https://openalex.org/W2226641048","https://openalex.org/W2002555800","https://openalex.org/W2021425015"],"abstract_inverted_index":{"Metallic":[0],"nanostructured-based":[1],"biosensors":[2,15,145],"provide":[3],"label-free,":[4],"multiplexed,":[5],"and":[6,11,26,34,99,106,149],"real-time":[7],"detections":[8],"of":[9,40,83,109,123,137,144,164,182,188,216],"chemical":[10],"biological":[12],"targets.":[13],"Aluminum-based":[14,73],"are":[16,112],"favored":[17],"in":[18,32,38,55,114,146,172,179,220],"this":[19,70,115,124,209],"category,":[20],"due":[21],"to":[22,77,191,200],"their":[23,46,53],"enhanced":[24],"stability":[25],"profitability.":[27],"Despite":[28],"the":[29,35,81,110,118,121,138,161,165,169,180,185,195,214,221],"recent":[30],"advances":[31],"nanotechnology":[33],"significant":[36],"improvement":[37],"development":[39],"these":[41],"biosensors,":[42],"some":[43],"deficiencies":[44],"restrict":[45],"utilization.":[47],"Hence":[48],"a":[49,131,157],"detailed":[50],"insight":[51],"into":[52],"behavior":[54,163],"different":[56,103,173],"conditions":[57,105],"would":[58],"be":[59,63,78,127],"crucial,":[60],"which":[61],"can":[62],"achieved":[64],"with":[65,80,193,206],"nanoscale":[66],"numerical":[67],"simulation.":[68],"With":[69],"aim,":[71],"an":[72,177],"biosensor":[74,170,186],"is":[75,152],"chosen":[76],"analyzed":[79],"help":[82],"all-atom":[84],"molecular":[85],"dynamics":[86],"model":[87,133,158],"(AA-MD),":[88],"using":[89],"large-scale":[90],"atomic/molecular":[91],"massively":[92],"parallel":[93],"simulator":[94],"(LAMMPS).":[95],"The":[96,142],"surface":[97,135,171,187],"properties":[98,136],"adsorption":[100,181],"process":[101],"through":[102],"flow":[104],"various":[107],"concentration":[108,208],"target,":[111],"investigated":[113],"study.":[116],"In":[117],"future":[119,222],"work,":[120],"results":[122],"study":[125],"will":[126],"used":[128],"for":[129,134,159,204],"developing":[130],"predictive":[132],"biosensor.":[139],"Clinical":[140],"Relevance-":[141],"role":[143],"clinical":[147],"applications":[148],"early":[150],"diagnosis":[151],"evident.":[153],"This":[154],"work":[155],"provides":[156],"predicting":[160],"binding":[162],"target":[166],"molecules":[167],"on":[168,184],"conditions.":[174],"Results":[175],"demonstrate":[176],"increase":[178],"ethanol":[183],"7%":[189],"up":[190],"80%":[192],"changing":[194],"velocity":[196],"from":[197],"0.001":[198],"m/s":[199,202],"1":[201],"Although":[203],"cases":[205],"higher":[207],"trend":[210],"becomes":[211],"complicated":[212],"necessitating":[213],"implementation":[215],"machine":[217],"learning":[218],"models":[219],"works.":[223]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":2}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
