{"id":"https://openalex.org/W3213664586","doi":"https://doi.org/10.1109/embc46164.2021.9631097","title":"Automated Atlas-based Segmentation of Single Coronal Mouse Brain Slices using Linear 2D-2D Registration","display_name":"Automated Atlas-based Segmentation of Single Coronal Mouse Brain Slices using Linear 2D-2D Registration","publication_year":2021,"publication_date":"2021-11-01","ids":{"openalex":"https://openalex.org/W3213664586","doi":"https://doi.org/10.1109/embc46164.2021.9631097","mag":"3213664586","pmid":"https://pubmed.ncbi.nlm.nih.gov/34891844"},"language":"en","primary_location":{"id":"doi:10.1109/embc46164.2021.9631097","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc46164.2021.9631097","pdf_url":null,"source":{"id":"https://openalex.org/S4363607750","display_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["arxiv","crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2111.08705","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048624527","display_name":"S\u00e9bastien Piluso","orcid":"https://orcid.org/0000-0002-4419-1748"},"institutions":[{"id":"https://openalex.org/I4210097138","display_name":"CEA Paris-Saclay - Etablissement de Fontenay-aux-roses","ror":"https://ror.org/010j2gw05","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210097138","https://openalex.org/I4210128565"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"funder","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210113668","display_name":"Direction de la Recherche Fondamentale","ror":"https://ror.org/01yvj5k91","country_code":"FR","type":"facility","lineage":["https://openalex.org/I2738703131","https://openalex.org/I4210113668"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Sebastien Piluso","raw_affiliation_strings":["CEA, Fundamental Research Division (DRF), Institute Jacob, Molecular Imaging Research Center (MIRCen), France","WITSEE, Paris, France","LMN - Laboratoire des Maladies Neurod\u00e9g\u00e9n\u00e9ratives - UMR 9199 (18 Route du panorama CEA Fontenay-aux-Roses B\u00e2timent 61 92 265 Fontenay-aux-Roses CEDEX Tel : 00 33 (0)1 46 54 84 11 - France)","Witsee (33 Av. des Champs-\u00c9lys\u00e9es, 75008 Paris - France)"],"affiliations":[{"raw_affiliation_string":"CEA, Fundamental Research Division (DRF), Institute Jacob, Molecular Imaging Research Center (MIRCen), France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210113668"]},{"raw_affiliation_string":"WITSEE, Paris, France","institution_ids":[]},{"raw_affiliation_string":"LMN - Laboratoire des Maladies Neurod\u00e9g\u00e9n\u00e9ratives - UMR 9199 (18 Route du panorama CEA Fontenay-aux-Roses B\u00e2timent 61 92 265 Fontenay-aux-Roses CEDEX Tel : 00 33 (0)1 46 54 84 11 - France)","institution_ids":["https://openalex.org/I4210097138","https://openalex.org/I2738703131"]},{"raw_affiliation_string":"Witsee (33 Av. des Champs-\u00c9lys\u00e9es, 75008 Paris - France)","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018333577","display_name":"Nicolas Souedet","orcid":"https://orcid.org/0000-0002-5260-2105"},"institutions":[{"id":"https://openalex.org/I4210097138","display_name":"CEA Paris-Saclay - Etablissement de Fontenay-aux-roses","ror":"https://ror.org/010j2gw05","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210097138","https://openalex.org/I4210128565"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"funder","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210113668","display_name":"Direction de la Recherche Fondamentale","ror":"https://ror.org/01yvj5k91","country_code":"FR","type":"facility","lineage":["https://openalex.org/I2738703131","https://openalex.org/I4210113668"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Nicolas Souedet","raw_affiliation_strings":["CEA, Fundamental Research Division (DRF), Institute Jacob, Molecular Imaging Research Center (MIRCen), France","LMN - Laboratoire des Maladies Neurod\u00e9g\u00e9n\u00e9ratives - UMR 9199 (18 Route du panorama CEA Fontenay-aux-Roses B\u00e2timent 61 92 265 Fontenay-aux-Roses CEDEX Tel : 00 33 (0)1 46 54 84 11 - France)"],"affiliations":[{"raw_affiliation_string":"CEA, Fundamental Research Division (DRF), Institute Jacob, Molecular Imaging Research Center (MIRCen), France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210113668"]},{"raw_affiliation_string":"LMN - Laboratoire des Maladies Neurod\u00e9g\u00e9n\u00e9ratives - UMR 9199 (18 Route du panorama CEA Fontenay-aux-Roses B\u00e2timent 61 92 265 Fontenay-aux-Roses CEDEX Tel : 00 33 (0)1 46 54 84 11 - France)","institution_ids":["https://openalex.org/I4210097138","https://openalex.org/I2738703131"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028010133","display_name":"Caroline Jan","orcid":null},"institutions":[{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"funder","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210113668","display_name":"Direction de la Recherche Fondamentale","ror":"https://ror.org/01yvj5k91","country_code":"FR","type":"facility","lineage":["https://openalex.org/I2738703131","https://openalex.org/I4210113668"]},{"id":"https://openalex.org/I4210097138","display_name":"CEA Paris-Saclay - Etablissement de Fontenay-aux-roses","ror":"https://ror.org/010j2gw05","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210097138","https://openalex.org/I4210128565"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Caroline Jan","raw_affiliation_strings":["CEA, Fundamental Research Division (DRF), Institute Jacob, Molecular Imaging Research Center (MIRCen), France","LMN - Laboratoire des Maladies Neurod\u00e9g\u00e9n\u00e9ratives - UMR 9199 (18 Route du panorama CEA Fontenay-aux-Roses B\u00e2timent 61 92 265 Fontenay-aux-Roses CEDEX Tel : 00 33 (0)1 46 54 84 11 - France)","MIRCEN - Molecular Imaging Research Center [Fontenay-aux-Roses] (Fontenay-aux-Roses - France)"],"affiliations":[{"raw_affiliation_string":"CEA, Fundamental Research Division (DRF), Institute Jacob, Molecular Imaging Research Center (MIRCen), France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210113668"]},{"raw_affiliation_string":"LMN - Laboratoire des Maladies Neurod\u00e9g\u00e9n\u00e9ratives - UMR 9199 (18 Route du panorama CEA Fontenay-aux-Roses B\u00e2timent 61 92 265 Fontenay-aux-Roses CEDEX Tel : 00 33 (0)1 46 54 84 11 - France)","institution_ids":["https://openalex.org/I4210097138","https://openalex.org/I2738703131"]},{"raw_affiliation_string":"MIRCEN - Molecular Imaging Research Center [Fontenay-aux-Roses] (Fontenay-aux-Roses - France)","institution_ids":["https://openalex.org/I4210097138"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062649150","display_name":"C\u00e9dric Clouchoux","orcid":"https://orcid.org/0000-0003-3343-6524"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Cedric Clouchoux","raw_affiliation_strings":["WITSEE, Paris, France","Witsee (33 Av. des Champs-\u00c9lys\u00e9es, 75008 Paris - France)"],"affiliations":[{"raw_affiliation_string":"WITSEE, Paris, France","institution_ids":[]},{"raw_affiliation_string":"Witsee (33 Av. des Champs-\u00c9lys\u00e9es, 75008 Paris - France)","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113595631","display_name":"Thierry Delzescaux","orcid":"https://orcid.org/0000-0002-6527-7946"},"institutions":[{"id":"https://openalex.org/I4210113668","display_name":"Direction de la Recherche Fondamentale","ror":"https://ror.org/01yvj5k91","country_code":"FR","type":"facility","lineage":["https://openalex.org/I2738703131","https://openalex.org/I4210113668"]},{"id":"https://openalex.org/I4210097138","display_name":"CEA Paris-Saclay - Etablissement de Fontenay-aux-roses","ror":"https://ror.org/010j2gw05","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210097138","https://openalex.org/I4210128565"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"funder","lineage":["https://openalex.org/I2738703131"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Thierry Delzescaux","raw_affiliation_strings":["CEA, Fundamental Research Division (DRF), Institute Jacob, Molecular Imaging Research Center (MIRCen), France","MIRCEN - Molecular Imaging Research Center [Fontenay-aux-Roses] (Fontenay-aux-Roses - France)","LMN - Laboratoire des Maladies Neurod\u00e9g\u00e9n\u00e9ratives - UMR 9199 (18 Route du panorama CEA Fontenay-aux-Roses B\u00e2timent 61 92 265 Fontenay-aux-Roses CEDEX Tel : 00 33 (0)1 46 54 84 11 - France)"],"affiliations":[{"raw_affiliation_string":"CEA, Fundamental Research Division (DRF), Institute Jacob, Molecular Imaging Research Center (MIRCen), France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210113668"]},{"raw_affiliation_string":"MIRCEN - Molecular Imaging Research Center [Fontenay-aux-Roses] (Fontenay-aux-Roses - France)","institution_ids":["https://openalex.org/I4210097138"]},{"raw_affiliation_string":"LMN - Laboratoire des Maladies Neurod\u00e9g\u00e9n\u00e9ratives - UMR 9199 (18 Route du panorama CEA Fontenay-aux-Roses B\u00e2timent 61 92 265 Fontenay-aux-Roses CEDEX Tel : 00 33 (0)1 46 54 84 11 - France)","institution_ids":["https://openalex.org/I4210097138","https://openalex.org/I2738703131"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5048624527"],"corresponding_institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210097138","https://openalex.org/I4210113668"],"apc_list":null,"apc_paid":null,"fwci":0.1314,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.48109966,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"2021","issue":null,"first_page":"2860","last_page":"2863"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10627","display_name":"Advanced Image and Video Retrieval Techniques","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.8269641399383545},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8063193559646606},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7566993236541748},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.7240371704101562},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.6941360235214233},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.6202087998390198},{"id":"https://openalex.org/keywords/brain-atlas","display_name":"Brain atlas","score":0.5530626177787781},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.497055321931839},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.4578183889389038},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.4359535872936249},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.09704744815826416}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.8269641399383545},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8063193559646606},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7566993236541748},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.7240371704101562},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.6941360235214233},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.6202087998390198},{"id":"https://openalex.org/C2780972224","wikidata":"https://www.wikidata.org/wiki/Q17047956","display_name":"Brain atlas","level":2,"score":0.5530626177787781},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.497055321931839},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.4578183889389038},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4359535872936249},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.09704744815826416},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1109/embc46164.2021.9631097","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc46164.2021.9631097","pdf_url":null,"source":{"id":"https://openalex.org/S4363607750","display_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:34891844","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34891844","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null},{"id":"pmh:oai:arXiv.org:2111.08705","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2111.08705","pdf_url":"https://arxiv.org/pdf/2111.08705","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"pmh:oai:HAL:hal-04425076v1","is_oa":false,"landing_page_url":"https://hal.science/hal-04425076","pdf_url":null,"source":{"id":"https://openalex.org/S4406922398","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), IEEE, pp.2860-2863, 2021, &#x27E8;10.1109/EMBC46164.2021.9631097&#x27E9;","raw_type":"Proceedings"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2111.08705","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2111.08705","pdf_url":"https://arxiv.org/pdf/2111.08705","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320326256","display_name":"Grand \u00c9quipement National De Calcul Intensif","ror":"https://ror.org/0010d1q40"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3213664586.pdf","grobid_xml":"https://content.openalex.org/works/W3213664586.grobid-xml"},"referenced_works_count":8,"referenced_works":["https://openalex.org/W1984368305","https://openalex.org/W2074011271","https://openalex.org/W2078237160","https://openalex.org/W2161969291","https://openalex.org/W2408110716","https://openalex.org/W2905058438","https://openalex.org/W2947461179","https://openalex.org/W3030923655"],"related_works":["https://openalex.org/W3214912135","https://openalex.org/W4387252449","https://openalex.org/W4319337879","https://openalex.org/W2012519212","https://openalex.org/W4249039539","https://openalex.org/W1523541591","https://openalex.org/W2592984741","https://openalex.org/W1967068856","https://openalex.org/W1592689442","https://openalex.org/W1522196789"],"abstract_inverted_index":{"A":[0],"significant":[1],"challenge":[2],"for":[3],"brain":[4],"histological":[5,60],"data":[6,61],"analysis":[7],"is":[8,28,38],"to":[9,16,39,65,80],"precisely":[10],"identify":[11],"anatomical":[12],"regions":[13],"in":[14],"order":[15],"perform":[17,66],"accurate":[18],"local":[19],"quantifications":[20],"and":[21,34,82,102],"evaluate":[22],"therapeutic":[23],"solutions.":[24],"Usually,":[25],"this":[26],"task":[27],"performed":[29],"manually,":[30],"becoming":[31],"therefore":[32],"tedious":[33],"subjective.":[35],"Another":[36],"option":[37],"use":[40],"automatic":[41],"or":[42],"semi-automatic":[43],"methods,":[44],"among":[45],"which":[46],"segmentation":[47,69],"using":[48,95,104],"digital":[49],"atlases":[50,55],"co-registration.":[51],"However,":[52],"most":[53],"available":[54],"are":[56,62,73],"3D,":[57],"whereas":[58],"digitized":[59],"2D.":[63],"Methods":[64],"such":[67],"2D-3D":[68],"from":[70],"an":[71,105],"atlas":[72],"required.":[74],"This":[75],"paper":[76],"proposes":[77],"a":[78,90],"strategy":[79],"automatically":[81],"accurately":[83],"segment":[84],"single":[85],"2D":[86],"coronal":[87],"slices":[88],"within":[89],"3D":[91],"volume":[92],"of":[93],"atlas,":[94],"linear":[96],"registration.":[97],"We":[98],"validated":[99],"its":[100],"robustness":[101],"performance":[103],"exploratory":[106],"approach":[107],"at":[108],"whole-brain":[109],"scale.":[110]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
