{"id":"https://openalex.org/W4200005228","doi":"https://doi.org/10.1109/embc46164.2021.9630850","title":"Deep Learning on SDF for Classifying Brain Biomarkers","display_name":"Deep Learning on SDF for Classifying Brain Biomarkers","publication_year":2021,"publication_date":"2021-11-01","ids":{"openalex":"https://openalex.org/W4200005228","doi":"https://doi.org/10.1109/embc46164.2021.9630850","pmid":"https://pubmed.ncbi.nlm.nih.gov/34891469"},"language":"en","primary_location":{"id":"doi:10.1109/embc46164.2021.9630850","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc46164.2021.9630850","pdf_url":null,"source":{"id":"https://openalex.org/S4363607750","display_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8669623","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056839802","display_name":"Zhangsihao Yang","orcid":"https://orcid.org/0000-0002-5239-5898"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Zhangsihao Yang","raw_affiliation_strings":["Graduate Students of School of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA"],"affiliations":[{"raw_affiliation_string":"Graduate Students of School of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101826689","display_name":"Jianfeng Wu","orcid":"https://orcid.org/0000-0003-3990-5897"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jianfeng Wu","raw_affiliation_strings":["Graduate Students of School of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA"],"affiliations":[{"raw_affiliation_string":"Graduate Students of School of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100606557","display_name":"Paul M. Thompson","orcid":"https://orcid.org/0000-0002-4720-8867"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Paul M Thompson","raw_affiliation_strings":["Faculty of USC, Institute for Neuroimaging and Informatics, ISI, Los Angeles, CA, USA"],"affiliations":[{"raw_affiliation_string":"Faculty of USC, Institute for Neuroimaging and Informatics, ISI, Los Angeles, CA, USA","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100740828","display_name":"Yalin Wang","orcid":"https://orcid.org/0000-0002-6241-735X"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yalin Wang","raw_affiliation_strings":["Faculty of School of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA"],"affiliations":[{"raw_affiliation_string":"Faculty of School of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5056839802"],"corresponding_institution_ids":["https://openalex.org/I55732556"],"apc_list":null,"apc_paid":null,"fwci":0.3921,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.72868664,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"2021","issue":null,"first_page":"1051","last_page":"1054"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9829999804496765,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/neuroimaging","display_name":"Neuroimaging","score":0.7067184448242188},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.6037645936012268},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5249407291412354},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.49081239104270935},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.4860149025917053},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.47238874435424805},{"id":"https://openalex.org/keywords/brain-disease","display_name":"Brain disease","score":0.42410892248153687},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4132731854915619},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3998683989048004},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.29257577657699585},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.24953192472457886}],"concepts":[{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.7067184448242188},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.6037645936012268},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5249407291412354},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.49081239104270935},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.4860149025917053},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.47238874435424805},{"id":"https://openalex.org/C2991673738","wikidata":"https://www.wikidata.org/wiki/Q5062122","display_name":"Brain disease","level":3,"score":0.42410892248153687},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4132731854915619},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3998683989048004},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.29257577657699585},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.24953192472457886}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1109/embc46164.2021.9630850","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc46164.2021.9630850","pdf_url":null,"source":{"id":"https://openalex.org/S4363607750","display_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:34891469","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34891469","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8669623","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8669623","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Annu Int Conf IEEE Eng Med Biol Soc","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:8669623","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8669623","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Annu Int Conf IEEE Eng Med Biol Soc","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.7400000095367432}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":37,"referenced_works":["https://openalex.org/W92634156","https://openalex.org/W1522301498","https://openalex.org/W1686810756","https://openalex.org/W1901129140","https://openalex.org/W1901624583","https://openalex.org/W1920022804","https://openalex.org/W1946609740","https://openalex.org/W1980541833","https://openalex.org/W2053862380","https://openalex.org/W2104615170","https://openalex.org/W2110424796","https://openalex.org/W2122320288","https://openalex.org/W2122328291","https://openalex.org/W2144935315","https://openalex.org/W2155328970","https://openalex.org/W2560609797","https://openalex.org/W2624273542","https://openalex.org/W2937982218","https://openalex.org/W2962849139","https://openalex.org/W2963121255","https://openalex.org/W2963182550","https://openalex.org/W2963627347","https://openalex.org/W2963926543","https://openalex.org/W3009441391","https://openalex.org/W3192654745","https://openalex.org/W4394671432","https://openalex.org/W6603722601","https://openalex.org/W6631190155","https://openalex.org/W6637373629","https://openalex.org/W6639824700","https://openalex.org/W6640300118","https://openalex.org/W6680962578","https://openalex.org/W6687484953","https://openalex.org/W6739663239","https://openalex.org/W6739778489","https://openalex.org/W6763422710","https://openalex.org/W6794176315"],"related_works":["https://openalex.org/W2327340211","https://openalex.org/W2027542625","https://openalex.org/W4292199793","https://openalex.org/W2282195379","https://openalex.org/W2295388821","https://openalex.org/W2102312026","https://openalex.org/W2885663991","https://openalex.org/W2071433170","https://openalex.org/W2089784006","https://openalex.org/W4380075502"],"abstract_inverted_index":{"Biomarkers":[0],"are":[1,35],"one":[2],"of":[3,13,118,136],"the":[4,10,26,70,97,116,120,137],"primary":[5],"medical":[6],"signs":[7],"to":[8,31,72,80,89,107],"facilitate":[9],"early":[11],"detection":[12],"Alzheimer's":[14,98],"disease.":[15,27],"The":[16],"small":[17],"beta-amyloid":[18],"(A\u03b2)":[19],"peptide":[20],"is":[21,56],"an":[22],"important":[23],"indicator":[24],"for":[25],"However,":[28],"current":[29],"methods":[30],"detect":[32],"A\u03b2":[33,75,91,109],"pathology":[34],"either":[36],"invasive":[37,52],"(lumbar":[38],"puncture)":[39],"or":[40,131],"quite":[41],"costly":[42],"and":[43,53,103],"not":[44],"widely":[45,63],"available":[46],"(amyloid":[47],"PET).":[48],"Thus":[49],"a":[50,82],"less":[51],"cheaper":[54],"approach":[55],"demanded.":[57],"MRI":[58,88],"which":[59],"has":[60,67,122],"been":[61],"used":[62],"in":[64],"preclinical":[65],"AD":[66],"recently":[68],"shown":[69],"capability":[71],"predict":[73,90],"brain":[74],"positivity.":[76,92,110],"This":[77],"motivates":[78],"us":[79],"develop":[81],"method,":[83],"SDF":[84],"sparse":[85],"convolution,":[86],"taking":[87],"We":[93],"obtain":[94],"subjects":[95],"from":[96],"Disease":[99],"Neuroimaging":[100],"Initiative":[101],"(ADNI)":[102],"use":[104],"our":[105],"method":[106],"discriminate":[108],"Theoretically,":[111],"we":[112],"provide":[113],"analysis":[114],"towards":[115],"understanding":[117],"what":[119],"network":[121],"learned.":[123],"Empirically,":[124],"it":[125],"shows":[126],"strong":[127],"performance":[128],"on":[129],"par":[130],"even":[132],"better":[133],"than":[134],"state":[135],"art.":[138]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
