{"id":"https://openalex.org/W4200194562","doi":"https://doi.org/10.1109/embc46164.2021.9629563","title":"Convolutional Neural Networks for Chagas\u2019 Parasite Detection in Histopathological Images","display_name":"Convolutional Neural Networks for Chagas\u2019 Parasite Detection in Histopathological Images","publication_year":2021,"publication_date":"2021-11-01","ids":{"openalex":"https://openalex.org/W4200194562","doi":"https://doi.org/10.1109/embc46164.2021.9629563","pmid":"https://pubmed.ncbi.nlm.nih.gov/34891815"},"language":"en","primary_location":{"id":"doi:10.1109/embc46164.2021.9629563","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc46164.2021.9629563","pdf_url":null,"source":{"id":"https://openalex.org/S4363607750","display_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"N. Sanchez-Patino","orcid":null},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"N. Sanchez-Patino","raw_affiliation_strings":["Centro de F\u00edsica Aplicada y Tecnolog\u00eda Avanzada, Universidad Nacional Aut\u00f3noma de M\u00e9xico 3001, Juriquilla, Qro. M\u00e9xico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro de F\u00edsica Aplicada y Tecnolog\u00eda Avanzada, Universidad Nacional Aut\u00f3noma de M\u00e9xico 3001, Juriquilla, Qro. M\u00e9xico","institution_ids":["https://openalex.org/I8961855"]}]},{"author_position":"middle","author":{"id":null,"display_name":"A. Toriz-Vazquez","orcid":null},"institutions":[{"id":"https://openalex.org/I81992734","display_name":"Universidad del Valle de M\u00e9xico","ror":"https://ror.org/05h9c3z20","country_code":"MX","type":"education","lineage":["https://openalex.org/I81992734"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"A. Toriz-Vazquez","raw_affiliation_strings":["Faculty of Engineering, Universidad del Valle de M\u00e9xico, Naranjos Punta Juriquilla, Santiago de Quer\u00e9taro, Qro., M\u00e9xico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Engineering, Universidad del Valle de M\u00e9xico, Naranjos Punta Juriquilla, Santiago de Quer\u00e9taro, Qro., M\u00e9xico","institution_ids":["https://openalex.org/I81992734"]}]},{"author_position":"middle","author":{"id":null,"display_name":"N. Hevia-Montiel","orcid":null},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"N. Hevia-Montiel","raw_affiliation_strings":["Instituto de Investigaciones en Matematicas Aplicadas y en Sistemas, Universidad Nacional Autonoma de Mexico, M\u00e9xico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto de Investigaciones en Matematicas Aplicadas y en Sistemas, Universidad Nacional Autonoma de Mexico, M\u00e9xico","institution_ids":["https://openalex.org/I8961855"]}]},{"author_position":"last","author":{"id":null,"display_name":"J. Perez-Gonzalez","orcid":null},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"J. Perez-Gonzalez","raw_affiliation_strings":["Instituto de Investigaciones en Matematicas Aplicadas y en Sistemas, Universidad Nacional Autonoma de Mexico, M\u00e9xico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto de Investigaciones en Matematicas Aplicadas y en Sistemas, Universidad Nacional Autonoma de Mexico, M\u00e9xico","institution_ids":["https://openalex.org/I8961855"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.8878,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.7784658,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"2021","issue":null,"first_page":"2732","last_page":"2735"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.41510000824928284,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.41510000824928284,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.26809999346733093,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12702","display_name":"Brain Tumor Detection and Classification","score":0.047600001096725464,"subfield":{"id":"https://openalex.org/subfields/2808","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.8051000237464905},{"id":"https://openalex.org/keywords/jaccard-index","display_name":"Jaccard index","score":0.7542999982833862},{"id":"https://openalex.org/keywords/chagas-disease","display_name":"Chagas disease","score":0.6722999811172485},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5626000165939331},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5432999730110168},{"id":"https://openalex.org/keywords/amastigote","display_name":"Amastigote","score":0.43650001287460327},{"id":"https://openalex.org/keywords/trypanosoma-cruzi","display_name":"Trypanosoma cruzi","score":0.42160001397132874}],"concepts":[{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.8051000237464905},{"id":"https://openalex.org/C203519979","wikidata":"https://www.wikidata.org/wiki/Q865360","display_name":"Jaccard index","level":3,"score":0.7542999982833862},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6894000172615051},{"id":"https://openalex.org/C112418997","wikidata":"https://www.wikidata.org/wiki/Q649558","display_name":"Chagas disease","level":2,"score":0.6722999811172485},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5626000165939331},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5432999730110168},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.487199991941452},{"id":"https://openalex.org/C98319499","wikidata":"https://www.wikidata.org/wiki/Q455445","display_name":"Amastigote","level":4,"score":0.43650001287460327},{"id":"https://openalex.org/C2777625466","wikidata":"https://www.wikidata.org/wiki/Q150162","display_name":"Trypanosoma cruzi","level":3,"score":0.42160001397132874},{"id":"https://openalex.org/C2775934546","wikidata":"https://www.wikidata.org/wiki/Q179991","display_name":"Biopsy","level":2,"score":0.40070000290870667},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.35249999165534973},{"id":"https://openalex.org/C3019792204","wikidata":"https://www.wikidata.org/wiki/Q353172","display_name":"Protozoan parasite","level":3,"score":0.32330000400543213},{"id":"https://openalex.org/C2992447962","wikidata":"https://www.wikidata.org/wiki/Q1601794","display_name":"Parasitic infection","level":2,"score":0.28870001435279846},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.2842999994754791},{"id":"https://openalex.org/C2777522853","wikidata":"https://www.wikidata.org/wiki/Q5276128","display_name":"Digital pathology","level":2,"score":0.2775999903678894},{"id":"https://openalex.org/C71928629","wikidata":"https://www.wikidata.org/wiki/Q804206","display_name":"Parasite hosting","level":2,"score":0.2705000042915344},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.257999986410141}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009206","descriptor_name":"Myocardium","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009206","descriptor_name":"Myocardium","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009206","descriptor_name":"Myocardium","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010271","descriptor_name":"Parasites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010271","descriptor_name":"Parasites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010271","descriptor_name":"Parasites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014349","descriptor_name":"Trypanosoma cruzi","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014349","descriptor_name":"Trypanosoma cruzi","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014349","descriptor_name":"Trypanosoma cruzi","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/embc46164.2021.9629563","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc46164.2021.9629563","pdf_url":null,"source":{"id":"https://openalex.org/S4363607750","display_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 43rd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:34891815","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34891815","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":13,"referenced_works":["https://openalex.org/W1975518001","https://openalex.org/W2129112648","https://openalex.org/W2751274270","https://openalex.org/W2771918349","https://openalex.org/W2808285893","https://openalex.org/W2939306289","https://openalex.org/W2941850061","https://openalex.org/W2954996726","https://openalex.org/W2969278648","https://openalex.org/W3012453708","https://openalex.org/W6639824700","https://openalex.org/W6765291380","https://openalex.org/W6929290682"],"related_works":[],"abstract_inverted_index":{"Chagas":[0,145],"disease":[1,146],"is":[2,30],"a":[3,31,43,61,75],"widely":[4],"spreaded":[5],"illness":[6],"caused":[7],"by":[8],"the":[9,20,25,94,113,144],"parasite":[10],"Trypanosoma":[11],"cruzi":[12,68],"(T.":[13],"cruzi).":[14],"Most":[15],"cases":[16],"go":[17],"unnoticed":[18],"until":[19],"accumulated":[21],"myocardial":[22,36],"damage":[23],"affect":[24],"patient.":[26],"The":[27,57,108,126],"endomyocardium":[28,76],"biopsy":[29,77],"tool":[32,135],"to":[33,50,65],"evaluate":[34],"sustained":[35],"damage,":[37],"but":[38],"analyzing":[39],"histopathological":[40,71,123],"images":[41,72],"takes":[42],"lot":[44],"of":[45,99,104,136],"time":[46],"and":[47,91,101,148],"its":[48,54],"prone":[49],"human":[51],"error,":[52],"given":[53],"subjective":[55],"nature.":[56],"following":[58],"work":[59],"presents":[60],"deep":[62],"learning":[63],"method":[64,128],"detect":[66],"T.":[67],"amastigotes":[69,120,137],"on":[70],"taken":[73],"from":[74,93],"during":[78],"an":[79],"experimental":[80],"murine":[81],"model.":[82],"A":[83],"U-Net":[84],"convolutional":[85],"neural":[86],"network":[87],"architecture":[88],"was":[89],"implemented":[90],"trained":[92],"ground":[95],"up.":[96],"An":[97],"accuracy":[98],"99.19%":[100],"Jaccard":[102],"index":[103],"49.43%":[105],"were":[106],"achieved.":[107],"obtained":[109],"results":[110],"suggest":[111],"that":[112],"proposed":[114,127],"approach":[115],"can":[116,129,140],"be":[117,130,141],"useful":[118,142],"for":[119,143],"detection":[121,134],"in":[122],"images.Clinical":[124],"relevance-":[125],"incorporated":[131],"as":[132],"automatic":[133],"nests,":[138],"it":[139],"analysis":[147],"diagnosis.":[149]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2021-12-31T00:00:00"}
