{"id":"https://openalex.org/W3024591812","doi":"https://doi.org/10.1109/embc44109.2020.9176279","title":"Supervision and Source Domain Impact on Representation Learning: A Histopathology Case Study","display_name":"Supervision and Source Domain Impact on Representation Learning: A Histopathology Case Study","publication_year":2020,"publication_date":"2020-07-01","ids":{"openalex":"https://openalex.org/W3024591812","doi":"https://doi.org/10.1109/embc44109.2020.9176279","mag":"3024591812","pmid":"https://pubmed.ncbi.nlm.nih.gov/33018251"},"language":"en","primary_location":{"id":"doi:10.1109/embc44109.2020.9176279","is_oa":true,"landing_page_url":"https://doi.org/10.1109/embc44109.2020.9176279","pdf_url":"https://ieeexplore.ieee.org/ielx7/9167168/9175149/09176279.pdf","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 42nd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["arxiv","crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/9167168/9175149/09176279.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Milad Sikaroudi","orcid":null},"institutions":[{"id":"https://openalex.org/I151746483","display_name":"University of Waterloo","ror":"https://ror.org/01aff2v68","country_code":"CA","type":"education","lineage":["https://openalex.org/I151746483"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Milad Sikaroudi","raw_affiliation_strings":["Laboratory for Knowledge Inference in Medical Image Analysis (Kimia Lab), University of Waterloo, Waterloo, ON, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Knowledge Inference in Medical Image Analysis (Kimia Lab), University of Waterloo, Waterloo, ON, Canada","institution_ids":["https://openalex.org/I151746483"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Amir Safarpoor","orcid":null},"institutions":[{"id":"https://openalex.org/I151746483","display_name":"University of Waterloo","ror":"https://ror.org/01aff2v68","country_code":"CA","type":"education","lineage":["https://openalex.org/I151746483"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Amir Safarpoor","raw_affiliation_strings":["Laboratory for Knowledge Inference in Medical Image Analysis (Kimia Lab), University of Waterloo, Waterloo, ON, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Knowledge Inference in Medical Image Analysis (Kimia Lab), University of Waterloo, Waterloo, ON, Canada","institution_ids":["https://openalex.org/I151746483"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Benyamin Ghojogh","orcid":null},"institutions":[{"id":"https://openalex.org/I151746483","display_name":"University of Waterloo","ror":"https://ror.org/01aff2v68","country_code":"CA","type":"education","lineage":["https://openalex.org/I151746483"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Benyamin Ghojogh","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Waterloo, Waterloo, ON, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Waterloo, Waterloo, ON, Canada","institution_ids":["https://openalex.org/I151746483"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Sobhan Shafiei","orcid":null},"institutions":[{"id":"https://openalex.org/I151746483","display_name":"University of Waterloo","ror":"https://ror.org/01aff2v68","country_code":"CA","type":"education","lineage":["https://openalex.org/I151746483"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Sobhan Shafiei","raw_affiliation_strings":["Laboratory for Knowledge Inference in Medical Image Analysis (Kimia Lab), University of Waterloo, Waterloo, ON, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Knowledge Inference in Medical Image Analysis (Kimia Lab), University of Waterloo, Waterloo, ON, Canada","institution_ids":["https://openalex.org/I151746483"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Mark Crowley","orcid":null},"institutions":[{"id":"https://openalex.org/I151746483","display_name":"University of Waterloo","ror":"https://ror.org/01aff2v68","country_code":"CA","type":"education","lineage":["https://openalex.org/I151746483"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Mark Crowley","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Waterloo, Waterloo, ON, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Waterloo, Waterloo, ON, Canada","institution_ids":["https://openalex.org/I151746483"]}]},{"author_position":"last","author":{"id":null,"display_name":"H.R. Tizhoosh","orcid":null},"institutions":[{"id":"https://openalex.org/I151746483","display_name":"University of Waterloo","ror":"https://ror.org/01aff2v68","country_code":"CA","type":"education","lineage":["https://openalex.org/I151746483"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"H.R. Tizhoosh","raw_affiliation_strings":["Laboratory for Knowledge Inference in Medical Image Analysis (Kimia Lab), University of Waterloo, Waterloo, ON, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Knowledge Inference in Medical Image Analysis (Kimia Lab), University of Waterloo, Waterloo, ON, Canada","institution_ids":["https://openalex.org/I151746483"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I151746483"],"apc_list":null,"apc_paid":null,"fwci":1.6812,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.84612124,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"2","issue":null,"first_page":"1400","last_page":"1403"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11894","display_name":"Radiology practices and education","score":0.9376999735832214,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11894","display_name":"Radiology practices and education","score":0.9376999735832214,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10254","display_name":"Innovations in Medical Education","score":0.9333000183105469,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9315999746322632,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.7142000198364258},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.7006999850273132},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.60589998960495},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5755000114440918},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5479999780654907},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5410000085830688},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4578000009059906},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4462999999523163}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7919999957084656},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.7142000198364258},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.7006999850273132},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6722000241279602},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.60589998960495},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5755000114440918},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5479999780654907},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5410000085830688},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4578000009059906},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4462999999523163},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.445499986410141},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.413100004196167},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.39149999618530273},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.3813000023365021},{"id":"https://openalex.org/C116409475","wikidata":"https://www.wikidata.org/wiki/Q1385056","display_name":"External Data Representation","level":2,"score":0.37139999866485596},{"id":"https://openalex.org/C136389625","wikidata":"https://www.wikidata.org/wiki/Q334384","display_name":"Supervised learning","level":3,"score":0.32850000262260437},{"id":"https://openalex.org/C8038995","wikidata":"https://www.wikidata.org/wiki/Q1152135","display_name":"Unsupervised learning","level":2,"score":0.3237000107765198},{"id":"https://openalex.org/C51632099","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Training set","level":2,"score":0.3147999942302704},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.29339998960494995},{"id":"https://openalex.org/C2776145971","wikidata":"https://www.wikidata.org/wiki/Q30673951","display_name":"Labeled data","level":2,"score":0.28850001096725464},{"id":"https://openalex.org/C534262118","wikidata":"https://www.wikidata.org/wiki/Q177719","display_name":"Medical diagnosis","level":2,"score":0.2831999957561493},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.2696000039577484},{"id":"https://openalex.org/C2984842247","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep neural networks","level":3,"score":0.26570001244544983},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.263700008392334},{"id":"https://openalex.org/C75294576","wikidata":"https://www.wikidata.org/wiki/Q5165192","display_name":"Contextual image classification","level":3,"score":0.25940001010894775}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008208","descriptor_name":"Lymphatic System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008208","descriptor_name":"Lymphatic System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008208","descriptor_name":"Lymphatic System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019587","descriptor_name":"Dietary Supplements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019587","descriptor_name":"Dietary Supplements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019587","descriptor_name":"Dietary Supplements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1109/embc44109.2020.9176279","is_oa":true,"landing_page_url":"https://doi.org/10.1109/embc44109.2020.9176279","pdf_url":"https://ieeexplore.ieee.org/ielx7/9167168/9175149/09176279.pdf","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 42nd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:33018251","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33018251","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null},{"id":"pmh:oai:arXiv.org:2005.08629","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2005.08629","pdf_url":"https://arxiv.org/pdf/2005.08629","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"}],"best_oa_location":{"id":"doi:10.1109/embc44109.2020.9176279","is_oa":true,"landing_page_url":"https://doi.org/10.1109/embc44109.2020.9176279","pdf_url":"https://ieeexplore.ieee.org/ielx7/9167168/9175149/09176279.pdf","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 42nd Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3024591812.pdf","grobid_xml":"https://content.openalex.org/works/W3024591812.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W2096733369","https://openalex.org/W2194775991","https://openalex.org/W2435090885","https://openalex.org/W2751723768","https://openalex.org/W2772723798","https://openalex.org/W2778517291","https://openalex.org/W2905124195","https://openalex.org/W2959874569","https://openalex.org/W2963775347","https://openalex.org/W2964246847","https://openalex.org/W6637373629","https://openalex.org/W6748816842","https://openalex.org/W6755095635","https://openalex.org/W6763228354","https://openalex.org/W6771094613","https://openalex.org/W6783596713"],"related_works":[],"abstract_inverted_index":{"As":[0,47],"many":[1],"algorithms":[2],"depend":[3],"on":[4,128],"a":[5,15,35,62,81],"suitable":[6],"representation":[7,30,92],"of":[8,29,38,44,52,54,59,80,91,98],"data,":[9],"learning":[10,116,127],"unique":[11],"features":[12],"is":[13,61],"considered":[14],"crucial":[16],"task.":[17],"Although":[18],"supervised":[19,115],"techniques":[20],"using":[21],"deep":[22,82],"neural":[23,83],"networks":[24],"have":[25],"boosted":[26],"the":[27,32,42,57,69,78,89,96,142],"performance":[28,79],"learning,":[31],"need":[33],"for":[34],"large":[36,70],"sets":[37],"labeled":[39],"data":[40],"limits":[41],"application":[43],"such":[45],"methods.":[46],"an":[48],"example,":[49],"high-quality":[50],"delineations":[51],"regions":[53],"interest":[55],"in":[56,88,102,117],"field":[58],"pathology":[60,103,132,150],"tedious":[63],"and":[64,85,100,106,112,139],"time-consuming":[65],"task":[66],"due":[67],"to":[68,114,147],"image":[71,133],"dimensions.":[72],"In":[73],"this":[74],"work,":[75],"we":[76],"explored":[77],"network":[84],"triplet":[86],"loss":[87],"area":[90],"learning.":[93],"We":[94,135],"investigated":[95],"notion":[97],"similarity":[99],"dissimilarity":[101],"whole-slide":[104],"images":[105],"compared":[107],"different":[108,121,149],"setups":[109],"from":[110],"unsupervised":[111],"semi-supervised":[113],"our":[118],"experiments.":[119],"Additionally,":[120],"approaches":[122],"were":[123,145],"tested,":[124],"applying":[125],"few-shot":[126],"two":[129,148],"publicly":[130],"available":[131],"datasets.":[134,151],"achieved":[136],"high":[137],"accuracy":[138],"generalization":[140],"when":[141],"learned":[143],"representations":[144],"applied":[146]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-08-05T07:39:15.569665","created_date":"2020-05-21T00:00:00"}
