{"id":"https://openalex.org/W4389542359","doi":"https://doi.org/10.1109/embc40787.2023.10340464","title":"Landmark-free Shape Analysis of the Human Duodenum<sup>*</sup>","display_name":"Landmark-free Shape Analysis of the Human Duodenum<sup>*</sup>","publication_year":2023,"publication_date":"2023-07-24","ids":{"openalex":"https://openalex.org/W4389542359","doi":"https://doi.org/10.1109/embc40787.2023.10340464","mag":"38083606","pmid":"https://pubmed.ncbi.nlm.nih.gov/38083606"},"language":"en","primary_location":{"id":"doi:10.1109/embc40787.2023.10340464","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc40787.2023.10340464","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 45th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078316907","display_name":"Nadun Palmada","orcid":"https://orcid.org/0000-0002-1465-4991"},"institutions":[{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]},{"id":"https://openalex.org/I4210159946","display_name":"Riddet Institute","ror":"https://ror.org/053336823","country_code":"NZ","type":"facility","lineage":["https://openalex.org/I1320288732","https://openalex.org/I154130895","https://openalex.org/I41125697","https://openalex.org/I4210159946","https://openalex.org/I4405260297","https://openalex.org/I4405260297","https://openalex.org/I51158804","https://openalex.org/I80281795"]},{"id":"https://openalex.org/I51158804","display_name":"Massey University","ror":"https://ror.org/052czxv31","country_code":"NZ","type":"education","lineage":["https://openalex.org/I51158804"]}],"countries":["NZ"],"is_corresponding":false,"raw_author_name":"Nadun Palmada","raw_affiliation_strings":["University of Auckland,Auckland Bioengineering Institute,Auckland,New Zealand,1010","Riddet Institute, Massey University, Palmerston North, New Zealand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Auckland,Auckland Bioengineering Institute,Auckland,New Zealand,1010","institution_ids":["https://openalex.org/I154130895"]},{"raw_affiliation_string":"Riddet Institute, Massey University, Palmerston North, New Zealand","institution_ids":["https://openalex.org/I4210159946","https://openalex.org/I51158804"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021459320","display_name":"John Cater","orcid":"https://orcid.org/0000-0002-3233-4000"},"institutions":[{"id":"https://openalex.org/I185492890","display_name":"University of Canterbury","ror":"https://ror.org/03y7q9t39","country_code":"NZ","type":"education","lineage":["https://openalex.org/I185492890"]}],"countries":["NZ"],"is_corresponding":false,"raw_author_name":"John E. Cater","raw_affiliation_strings":["University of Canterbury,Department of Mechanical Engineering,Christchurch,New Zealand,8041"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Canterbury,Department of Mechanical Engineering,Christchurch,New Zealand,8041","institution_ids":["https://openalex.org/I185492890"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036297582","display_name":"Leo K. Cheng","orcid":"https://orcid.org/0000-0003-2426-8987"},"institutions":[{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]},{"id":"https://openalex.org/I4210159946","display_name":"Riddet Institute","ror":"https://ror.org/053336823","country_code":"NZ","type":"facility","lineage":["https://openalex.org/I1320288732","https://openalex.org/I154130895","https://openalex.org/I41125697","https://openalex.org/I4210159946","https://openalex.org/I4405260297","https://openalex.org/I4405260297","https://openalex.org/I51158804","https://openalex.org/I80281795"]},{"id":"https://openalex.org/I51158804","display_name":"Massey University","ror":"https://ror.org/052czxv31","country_code":"NZ","type":"education","lineage":["https://openalex.org/I51158804"]}],"countries":["NZ"],"is_corresponding":false,"raw_author_name":"Leo K. Cheng","raw_affiliation_strings":["University of Auckland,Auckland Bioengineering Institute,Auckland,New Zealand,1010","Riddet Institute, Massey University, Palmerston North, New Zealand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Auckland,Auckland Bioengineering Institute,Auckland,New Zealand,1010","institution_ids":["https://openalex.org/I154130895"]},{"raw_affiliation_string":"Riddet Institute, Massey University, Palmerston North, New Zealand","institution_ids":["https://openalex.org/I4210159946","https://openalex.org/I51158804"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076785097","display_name":"V. Suresh","orcid":"https://orcid.org/0000-0002-7198-1446"},"institutions":[{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]}],"countries":["NZ"],"is_corresponding":false,"raw_author_name":"Vinod Suresh","raw_affiliation_strings":["University of Auckland,Auckland Bioengineering Institute,Auckland,New Zealand,1010","Department of Engineering Science, University of Auckland, Auckland, New Zealand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Auckland,Auckland Bioengineering Institute,Auckland,New Zealand,1010","institution_ids":["https://openalex.org/I154130895"]},{"raw_affiliation_string":"Department of Engineering Science, University of Auckland, Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"2023","issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9613000154495239,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9613000154495239,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10719","display_name":"3D Shape Modeling and Analysis","score":0.9002000093460083,"subfield":{"id":"https://openalex.org/subfields/2206","display_name":"Computational Mechanics"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/landmark","display_name":"Landmark","score":0.6792406439781189},{"id":"https://openalex.org/keywords/duodenum","display_name":"Duodenum","score":0.5657957196235657},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5059837698936462},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.34291356801986694},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.14467591047286987}],"concepts":[{"id":"https://openalex.org/C2780297707","wikidata":"https://www.wikidata.org/wiki/Q4895393","display_name":"Landmark","level":2,"score":0.6792406439781189},{"id":"https://openalex.org/C2776809568","wikidata":"https://www.wikidata.org/wiki/Q134955","display_name":"Duodenum","level":2,"score":0.5657957196235657},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5059837698936462},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.34291356801986694},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.14467591047286987},{"id":"https://openalex.org/C141071460","wikidata":"https://www.wikidata.org/wiki/Q40821","display_name":"Surgery","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D004386","descriptor_name":"Duodenum","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D004386","descriptor_name":"Duodenum","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D004386","descriptor_name":"Duodenum","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D004386","descriptor_name":"Duodenum","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D004386","descriptor_name":"Duodenum","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013270","descriptor_name":"Stomach","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013270","descriptor_name":"Stomach","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013270","descriptor_name":"Stomach","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013270","descriptor_name":"Stomach","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013270","descriptor_name":"Stomach","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1109/embc40787.2023.10340464","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc40787.2023.10340464","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 45th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"mag:38083606","is_oa":false,"landing_page_url":"http://www.osti.gov/scitech/biblio/5336639-us-department-energy-participation-federal-field-exercise","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null},{"id":"pmid:38083606","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38083606","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null},{"id":"pmh:oai:researchspace.auckland.ac.nz:2292/69939","is_oa":false,"landing_page_url":"https://hdl.handle.net/2292/69939","pdf_url":null,"source":{"id":"https://openalex.org/S7407055463","display_name":"ResearchSpace (University of Auckland)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I154130895","host_organization_name":"University of Auckland","host_organization_lineage":["https://openalex.org/I154130895"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Conference Item"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7300000190734863,"display_name":"Sustainable cities and communities","id":"https://metadata.un.org/sdg/11"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1972759265","https://openalex.org/W1978783086","https://openalex.org/W1981660604","https://openalex.org/W2009398710","https://openalex.org/W2045242509","https://openalex.org/W2086940601","https://openalex.org/W2090107137","https://openalex.org/W2096562404","https://openalex.org/W2101234009","https://openalex.org/W2164346027","https://openalex.org/W2175031088","https://openalex.org/W2285077570","https://openalex.org/W2293050990","https://openalex.org/W2296151026","https://openalex.org/W2789645188","https://openalex.org/W2803419220","https://openalex.org/W2883113081","https://openalex.org/W3091772648","https://openalex.org/W3175763278","https://openalex.org/W3210989841","https://openalex.org/W4319292979","https://openalex.org/W6675354045","https://openalex.org/W6803448099","https://openalex.org/W7006191206"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2056853153","https://openalex.org/W2057559274","https://openalex.org/W2005087563","https://openalex.org/W2378111931","https://openalex.org/W2052388267","https://openalex.org/W2950647290","https://openalex.org/W1968481813","https://openalex.org/W2620829895"],"abstract_inverted_index":{"The":[0,118,176,270],"primary":[1],"function":[2],"of":[3,43,52,92,103,115,124,128,152,172,184,188,210,219,258],"the":[4,14,20,25,37,41,44,50,56,62,78,101,110,116,160,173,191,194,201,205,213,220,228,234,242,246,256,261,267],"duodenum":[5,45,53,195,244,287],"is":[6,22,34,107,233],"to":[7,87,167,169,200,237,254,281],"undertake":[8],"chemical":[9],"digestion":[10],"by":[11,279],"ensuring":[12],"that":[13],"partially":[15],"digested":[16],"food":[17],"received":[18],"from":[19],"stomach":[21],"well-mixed":[23],"with":[24,196,251],"enzymes":[26],"and":[27,48,58,85,122,136,159,204,217,223,245,263],"chemicals":[28],"secreted":[29],"into":[30],"it.":[31],"However,":[32],"little":[33],"known":[35],"about":[36],"anatomical":[38],"variations":[39,76,189,225,240],"in":[40,77,190,212,216,241,273,284],"shape":[42,54,75,114,178,207,239,259],"within":[46,61,266],"humans,":[47],"thus":[49],"effect":[51,257],"on":[55,109,149,260],"flow":[57,252,262],"mixing":[59,264],"occurring":[60,265],"lumen":[63],"has":[64,82],"not":[65,99],"been":[66,83],"studied.":[67],"In":[68],"this":[69,125,274],"work,":[70],"a":[71,88,150],"methodology":[72],"for":[73,181],"analyzing":[74],"normal":[79,199],"duodenal":[80,120],"anatomy":[81],"developed":[84,272],"applied":[86],"publicly":[89],"available":[90],"dataset":[91,126],"abdominal":[93],"CT":[94],"images.":[95],"This":[96,232],"method":[97],"does":[98],"require":[100],"placement":[102],"landmarks":[104],"as":[105],"it":[106],"based":[108],"underlying":[111],"tubular":[112],"'C'":[113],"duodenum.":[117],"average":[119],"length":[121],"radius":[123,192],"(consisting":[127],"34":[129,153],"subjects)":[130],"were":[131,165],"212.8":[132],"\u00b1":[133,138],"38":[134],"mm":[135,140],"10.8":[137],"2.5":[139],"respectively.":[141],"A":[142],"Principal":[143],"Component":[144],"Analysis":[145],"(PCA)":[146],"was":[147],"conducted":[148],"sample":[151],"duodenums":[154],"after":[155],"normalizing":[156],"their":[157],"lengths":[158],"first":[161,177,235],"five":[162],"principal":[163],"components":[164],"found":[166],"contribute":[168],"82":[170],"%":[171,183],"total":[174],"variation.":[175],"component":[179],"(accounting":[180],"42":[182],"overall":[185],"variation)":[186],"consisted":[187,209],"along":[193],"no":[197],"deformations":[198],"central":[202,221],"plane,":[203,222],"subsequent":[206],"modes":[208],"twists":[211],"centerline":[214],"either":[215,227],"out":[218],"radial":[224],"at":[226],"inlet":[229],"or":[230],"outlet.":[231],"study":[236,275],"analyze":[238,255],"human":[243],"results":[247],"can":[248,276],"be":[249,277],"combined":[250],"modeling":[253],"duodenum.Clinical":[268],"relevance-":[269],"methods":[271],"used":[278],"clinicians":[280],"diagnose":[282],"abnormalities":[283],"an":[285],"individual's":[286],"shape.":[288]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2023-12-12T00:00:00"}
