{"id":"https://openalex.org/W4389542654","doi":"https://doi.org/10.1109/embc40787.2023.10340453","title":"Using Causal Inference to Estimate the Effect of Pre-Exposure Prophylaxis (PrEP) for HIV Prevention on COVID-19 Mortality","display_name":"Using Causal Inference to Estimate the Effect of Pre-Exposure Prophylaxis (PrEP) for HIV Prevention on COVID-19 Mortality","publication_year":2023,"publication_date":"2023-07-24","ids":{"openalex":"https://openalex.org/W4389542654","doi":"https://doi.org/10.1109/embc40787.2023.10340453","pmid":"https://pubmed.ncbi.nlm.nih.gov/38083367"},"language":"en","primary_location":{"id":"doi:10.1109/embc40787.2023.10340453","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/embc40787.2023.10340453","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 45th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025894950","display_name":"Ajan Subramanian","orcid":"https://orcid.org/0000-0003-3253-1300"},"institutions":[{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ajan Subramanian","raw_affiliation_strings":["University of California,Dept. of Computer Science,Irvine","Dept. of Computer Science, University of California, Irvine"],"affiliations":[{"raw_affiliation_string":"University of California,Dept. of Computer Science,Irvine","institution_ids":["https://openalex.org/I204250578"]},{"raw_affiliation_string":"Dept. of Computer Science, University of California, Irvine","institution_ids":["https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065502904","display_name":"Yong Huang","orcid":"https://orcid.org/0000-0001-8377-8923"},"institutions":[{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yong Huang","raw_affiliation_strings":["University of California,Dept. of Computer Science,Irvine","Dept. of Computer Science, University of California, Irvine"],"affiliations":[{"raw_affiliation_string":"University of California,Dept. of Computer Science,Irvine","institution_ids":["https://openalex.org/I204250578"]},{"raw_affiliation_string":"Dept. of Computer Science, University of California, Irvine","institution_ids":["https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058081537","display_name":"Melissa D. Pinto","orcid":"https://orcid.org/0000-0002-1003-180X"},"institutions":[{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Melissa D. Pinto","raw_affiliation_strings":["University of California,School of Nursing,Irvine","School of Nursing, University of California, Irvine"],"affiliations":[{"raw_affiliation_string":"University of California,School of Nursing,Irvine","institution_ids":["https://openalex.org/I204250578"]},{"raw_affiliation_string":"School of Nursing, University of California, Irvine","institution_ids":["https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041635920","display_name":"Charles A. Downs","orcid":"https://orcid.org/0000-0003-4859-7929"},"institutions":[{"id":"https://openalex.org/I145608581","display_name":"University of Miami","ror":"https://ror.org/02dgjyy92","country_code":"US","type":"education","lineage":["https://openalex.org/I145608581"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Charles A. Downs","raw_affiliation_strings":["University of Miami,School of Nursing and Health Sciences","School of Nursing and Health Sciences, University of Miami"],"affiliations":[{"raw_affiliation_string":"University of Miami,School of Nursing and Health Sciences","institution_ids":["https://openalex.org/I145608581"]},{"raw_affiliation_string":"School of Nursing and Health Sciences, University of Miami","institution_ids":["https://openalex.org/I145608581"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042140592","display_name":"Amir M. Rahmani","orcid":"https://orcid.org/0000-0003-0725-1155"},"institutions":[{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I4210136895","display_name":"Institute for the Future","ror":"https://ror.org/049tcsg76","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210136895"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amir M. Rahmani","raw_affiliation_strings":["University of California,Dept. of Computer Science,Irvine","Dept. of Computer Science, University of California, Irvine","Institute for Future Health (IFH), University of California, Irvine","School of Nursing, University of California, Irvine"],"affiliations":[{"raw_affiliation_string":"University of California,Dept. of Computer Science,Irvine","institution_ids":["https://openalex.org/I204250578"]},{"raw_affiliation_string":"Dept. of Computer Science, University of California, Irvine","institution_ids":["https://openalex.org/I204250578"]},{"raw_affiliation_string":"Institute for Future Health (IFH), University of California, Irvine","institution_ids":["https://openalex.org/I4210136895","https://openalex.org/I204250578"]},{"raw_affiliation_string":"School of Nursing, University of California, Irvine","institution_ids":["https://openalex.org/I204250578"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5025894950"],"corresponding_institution_ids":["https://openalex.org/I204250578"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.18036784,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"2023","issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10845","display_name":"Advanced Causal Inference Techniques","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10845","display_name":"Advanced Causal Inference Techniques","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10804","display_name":"Health Systems, Economic Evaluations, Quality of Life","score":0.9588000178337097,"subfield":{"id":"https://openalex.org/subfields/2002","display_name":"Economics and Econometrics"},"field":{"id":"https://openalex.org/fields/20","display_name":"Economics, Econometrics and Finance"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.9585999846458435,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pre-exposure-prophylaxis","display_name":"Pre-exposure prophylaxis","score":0.7780448198318481},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.6679182648658752},{"id":"https://openalex.org/keywords/causal-inference","display_name":"Causal inference","score":0.657774806022644},{"id":"https://openalex.org/keywords/human-immunodeficiency-virus","display_name":"Human immunodeficiency virus (HIV)","score":0.621101975440979},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.48638013005256653},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.45697152614593506},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.3646337389945984},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3508721590042114},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.15533745288848877},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.14437276124954224},{"id":"https://openalex.org/keywords/men-who-have-sex-with-men","display_name":"Men who have sex with men","score":0.07622635364532471},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.06780773401260376}],"concepts":[{"id":"https://openalex.org/C2779496540","wikidata":"https://www.wikidata.org/wiki/Q7239230","display_name":"Pre-exposure prophylaxis","level":5,"score":0.7780448198318481},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.6679182648658752},{"id":"https://openalex.org/C158600405","wikidata":"https://www.wikidata.org/wiki/Q5054566","display_name":"Causal inference","level":2,"score":0.657774806022644},{"id":"https://openalex.org/C3013748606","wikidata":"https://www.wikidata.org/wiki/Q15787","display_name":"Human immunodeficiency virus (HIV)","level":2,"score":0.621101975440979},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.48638013005256653},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.45697152614593506},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.3646337389945984},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3508721590042114},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.15533745288848877},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.14437276124954224},{"id":"https://openalex.org/C2776939746","wikidata":"https://www.wikidata.org/wiki/Q853451","display_name":"Men who have sex with men","level":4,"score":0.07622635364532471},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.06780773401260376},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.0},{"id":"https://openalex.org/C2776983459","wikidata":"https://www.wikidata.org/wiki/Q41083","display_name":"Syphilis","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000517","qualifier_name":"prevention & control","is_major_topic":true},{"descriptor_ui":"D015984","descriptor_name":"Causality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015984","descriptor_name":"Causality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015984","descriptor_name":"Causality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015984","descriptor_name":"Causality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015984","descriptor_name":"Causality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015984","descriptor_name":"Causality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064887","descriptor_name":"Observational Studies as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064887","descriptor_name":"Observational Studies as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064887","descriptor_name":"Observational Studies as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064887","descriptor_name":"Observational Studies as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D065129","descriptor_name":"Pre-Exposure Prophylaxis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D065129","descriptor_name":"Pre-Exposure Prophylaxis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D065129","descriptor_name":"Pre-Exposure Prophylaxis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D065129","descriptor_name":"Pre-Exposure Prophylaxis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D065129","descriptor_name":"Pre-Exposure Prophylaxis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D065129","descriptor_name":"Pre-Exposure Prophylaxis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/embc40787.2023.10340453","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/embc40787.2023.10340453","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 45th Annual International Conference of the IEEE Engineering in Medicine &amp; Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:38083367","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38083367","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8100000023841858,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W1847771980","https://openalex.org/W1992882281","https://openalex.org/W2110818436","https://openalex.org/W2143117649","https://openalex.org/W2155163959","https://openalex.org/W2486285194","https://openalex.org/W3088888685","https://openalex.org/W3089094108","https://openalex.org/W3160537436","https://openalex.org/W4246787776","https://openalex.org/W4281726190","https://openalex.org/W6789424048"],"related_works":["https://openalex.org/W3086345252","https://openalex.org/W3134272441","https://openalex.org/W4205698903","https://openalex.org/W4400613637","https://openalex.org/W4294968941","https://openalex.org/W4283819461","https://openalex.org/W4390279739","https://openalex.org/W2802142510","https://openalex.org/W2883964143","https://openalex.org/W2890395329"],"abstract_inverted_index":{"Traditional":[0],"machine":[1,135],"learning":[2,47,136],"(ML)":[3],"approaches":[4],"learn":[5],"to":[6,14,44,68,138],"recognize":[7],"patterns":[8],"in":[9,55,89,153,157,170],"the":[10,26,30,52,73,80,101,113,119,140,158,171],"data":[11,27],"but":[12],"fail":[13],"go":[15,45],"beyond":[16,46],"observing":[17],"associations.":[18],"Such":[19],"data-driven":[20,42],"methods":[21],"can":[22,40,60,151],"lack":[23],"generalizability":[24],"when":[25],"is":[28],"outside":[29],"independent":[31],"and":[32,50,64,115,134],"identically":[33],"distributed":[34],"(i.i.d)":[35],"setting.":[36],"Using":[37],"causal":[38,57,70,81,109,114,141],"inference":[39],"aid":[41],"techniques":[43,67,128],"spurious":[48],"associations":[49],"frame":[51],"data-generating":[53],"process":[54],"a":[56,108,154,162],"lens.":[58],"We":[59,125],"combine":[61],"domain":[62],"expertise":[63],"traditional":[65],"ML":[66],"answer":[69],"questions":[71],"on":[72,87],"data.":[74],"In":[75],"this":[76],"paper,":[77],"we":[78,106],"estimate":[79,139],"effect":[82],"of":[83,96,103,121,164],"Pre-Exposure":[84],"Prophylaxis":[85],"(PrEP)":[86],"mortality":[88],"COVID-19":[90],"patients":[91],"from":[92],"an":[93],"observational":[94],"dataset":[95],"over":[97],"120,000":[98],"patients.":[99],"With":[100],"help":[102],"medical":[104],"experts,":[105],"hypothesize":[107],"graph":[110],"that":[111,148],"identifies":[112],"non-causal":[116],"associations,":[117],"including":[118],"list":[120],"potential":[122],"confounding":[123],"variables.":[124],"use":[126],"estimation":[127],"such":[129],"as":[130],"linear":[131],"regression,":[132],"matching,":[133],"(meta-learners)":[137],"effect.":[142],"On":[143],"average,":[144],"our":[145],"estimates":[146],"show":[147],"taking":[149],"PrEP":[150],"result":[152],"2.1%":[155],"decrease":[156],"death":[159],"rate":[160],"or":[161],"total":[163],"around":[165],"2,540":[166],"patients'":[167],"lives":[168],"saved":[169],"studied":[172],"population.":[173]},"counts_by_year":[],"updated_date":"2025-12-25T23:11:45.687758","created_date":"2025-10-10T00:00:00"}
