{"id":"https://openalex.org/W2979820188","doi":"https://doi.org/10.1109/embc.2019.8857815","title":"Representation Learning of 3D Brain Angiograms, an Application for Cerebral Vasospasm Prediction","display_name":"Representation Learning of 3D Brain Angiograms, an Application for Cerebral Vasospasm Prediction","publication_year":2019,"publication_date":"2019-07-01","ids":{"openalex":"https://openalex.org/W2979820188","doi":"https://doi.org/10.1109/embc.2019.8857815","mag":"2979820188","pmid":"https://pubmed.ncbi.nlm.nih.gov/31946608"},"language":"en","primary_location":{"id":"doi:10.1109/embc.2019.8857815","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc.2019.8857815","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079557965","display_name":"Seymanur Capoglu","orcid":null},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Seymanur Capoglu","raw_affiliation_strings":["Center for Precision Health, School of Biomedical Informatics, UT Health, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Center for Precision Health, School of Biomedical Informatics, UT Health, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069569825","display_name":"Jude P. J. Savarraj","orcid":"https://orcid.org/0000-0003-0194-0734"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jude P. Savarraj","raw_affiliation_strings":["McGovern Medical School, UT Health, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"McGovern Medical School, UT Health, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000212230","display_name":"Sunil A. Sheth","orcid":"https://orcid.org/0000-0003-0602-8509"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sunil A. Sheth","raw_affiliation_strings":["McGovern Medical School, UT Health, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"McGovern Medical School, UT Health, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009628069","display_name":"H. Alex Choi","orcid":"https://orcid.org/0000-0001-7218-832X"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"H. Alex Choi","raw_affiliation_strings":["McGovern Medical School, UT Health, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"McGovern Medical School, UT Health, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026804774","display_name":"Luca Giancardo","orcid":"https://orcid.org/0000-0002-4862-2277"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Luca Giancardo","raw_affiliation_strings":["Institute for Stroke and Cerebrovascular Disease, UT Health, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Institute for Stroke and Cerebrovascular Disease, UT Health, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5079557965"],"corresponding_institution_ids":["https://openalex.org/I919571938"],"apc_list":null,"apc_paid":null,"fwci":0.6773,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.72449802,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"10554","issue":null,"first_page":"3394","last_page":"3398"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10227","display_name":"Acute Ischemic Stroke Management","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/vasospasm","display_name":"Vasospasm","score":0.706238865852356},{"id":"https://openalex.org/keywords/subarachnoid-hemorrhage","display_name":"Subarachnoid hemorrhage","score":0.6971105337142944},{"id":"https://openalex.org/keywords/cerebral-vasospasm","display_name":"Cerebral vasospasm","score":0.5819412469863892},{"id":"https://openalex.org/keywords/logistic-regression","display_name":"Logistic regression","score":0.5374629497528076},{"id":"https://openalex.org/keywords/stroke","display_name":"Stroke (engine)","score":0.5101816654205322},{"id":"https://openalex.org/keywords/ischemia","display_name":"Ischemia","score":0.4849119782447815},{"id":"https://openalex.org/keywords/complication","display_name":"Complication","score":0.480133980512619},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.47265636920928955},{"id":"https://openalex.org/keywords/aneurysm","display_name":"Aneurysm","score":0.4694993495941162},{"id":"https://openalex.org/keywords/cardiology","display_name":"Cardiology","score":0.4614831805229187},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.451822966337204},{"id":"https://openalex.org/keywords/cerebral-angiography","display_name":"Cerebral angiography","score":0.4127002954483032},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.36548370122909546},{"id":"https://openalex.org/keywords/angiography","display_name":"Angiography","score":0.33018049597740173},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3263852894306183},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.25731703639030457}],"concepts":[{"id":"https://openalex.org/C2778506911","wikidata":"https://www.wikidata.org/wiki/Q2849606","display_name":"Vasospasm","level":3,"score":0.706238865852356},{"id":"https://openalex.org/C2777736543","wikidata":"https://www.wikidata.org/wiki/Q693442","display_name":"Subarachnoid hemorrhage","level":2,"score":0.6971105337142944},{"id":"https://openalex.org/C2776820941","wikidata":"https://www.wikidata.org/wiki/Q5064103","display_name":"Cerebral vasospasm","level":4,"score":0.5819412469863892},{"id":"https://openalex.org/C151956035","wikidata":"https://www.wikidata.org/wiki/Q1132755","display_name":"Logistic regression","level":2,"score":0.5374629497528076},{"id":"https://openalex.org/C2780645631","wikidata":"https://www.wikidata.org/wiki/Q671554","display_name":"Stroke (engine)","level":2,"score":0.5101816654205322},{"id":"https://openalex.org/C541997718","wikidata":"https://www.wikidata.org/wiki/Q188151","display_name":"Ischemia","level":2,"score":0.4849119782447815},{"id":"https://openalex.org/C81182388","wikidata":"https://www.wikidata.org/wiki/Q353963","display_name":"Complication","level":2,"score":0.480133980512619},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.47265636920928955},{"id":"https://openalex.org/C2776098176","wikidata":"https://www.wikidata.org/wiki/Q189389","display_name":"Aneurysm","level":2,"score":0.4694993495941162},{"id":"https://openalex.org/C164705383","wikidata":"https://www.wikidata.org/wiki/Q10379","display_name":"Cardiology","level":1,"score":0.4614831805229187},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.451822966337204},{"id":"https://openalex.org/C2778749279","wikidata":"https://www.wikidata.org/wiki/Q5064095","display_name":"Cerebral angiography","level":3,"score":0.4127002954483032},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.36548370122909546},{"id":"https://openalex.org/C2780643987","wikidata":"https://www.wikidata.org/wiki/Q468414","display_name":"Angiography","level":2,"score":0.33018049597740173},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3263852894306183},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.25731703639030457},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002532","descriptor_name":"Intracranial Aneurysm","qualifier_ui":"Q000150","qualifier_name":"complications","is_major_topic":false},{"descriptor_ui":"D002532","descriptor_name":"Intracranial Aneurysm","qualifier_ui":"Q000150","qualifier_name":"complications","is_major_topic":false},{"descriptor_ui":"D002532","descriptor_name":"Intracranial Aneurysm","qualifier_ui":"Q000150","qualifier_name":"complications","is_major_topic":false},{"descriptor_ui":"D002533","descriptor_name":"Cerebral Angiography","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002533","descriptor_name":"Cerebral Angiography","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002533","descriptor_name":"Cerebral Angiography","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002545","descriptor_name":"Brain Ischemia","qualifier_ui":"Q000209","qualifier_name":"etiology","is_major_topic":false},{"descriptor_ui":"D002545","descriptor_name":"Brain Ischemia","qualifier_ui":"Q000209","qualifier_name":"etiology","is_major_topic":false},{"descriptor_ui":"D002545","descriptor_name":"Brain Ischemia","qualifier_ui":"Q000209","qualifier_name":"etiology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013345","descriptor_name":"Subarachnoid Hemorrhage","qualifier_ui":"Q000150","qualifier_name":"complications","is_major_topic":false},{"descriptor_ui":"D013345","descriptor_name":"Subarachnoid Hemorrhage","qualifier_ui":"Q000150","qualifier_name":"complications","is_major_topic":false},{"descriptor_ui":"D013345","descriptor_name":"Subarachnoid Hemorrhage","qualifier_ui":"Q000150","qualifier_name":"complications","is_major_topic":false},{"descriptor_ui":"D020301","descriptor_name":"Vasospasm, Intracranial","qualifier_ui":"Q000150","qualifier_name":"complications","is_major_topic":false},{"descriptor_ui":"D020301","descriptor_name":"Vasospasm, Intracranial","qualifier_ui":"Q000150","qualifier_name":"complications","is_major_topic":false},{"descriptor_ui":"D020301","descriptor_name":"Vasospasm, Intracranial","qualifier_ui":"Q000150","qualifier_name":"complications","is_major_topic":false},{"descriptor_ui":"D020301","descriptor_name":"Vasospasm, Intracranial","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D020301","descriptor_name":"Vasospasm, Intracranial","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D020301","descriptor_name":"Vasospasm, Intracranial","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/embc.2019.8857815","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc.2019.8857815","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:31946608","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31946608","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8199999928474426,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1540630416","https://openalex.org/W1560446111","https://openalex.org/W1605672252","https://openalex.org/W2005876975","https://openalex.org/W2029255095","https://openalex.org/W2036163530","https://openalex.org/W2113606819","https://openalex.org/W2127302541","https://openalex.org/W2151591509","https://openalex.org/W2156219382","https://openalex.org/W2157540829","https://openalex.org/W2160547390","https://openalex.org/W2166733965","https://openalex.org/W2168005337","https://openalex.org/W2510973590","https://openalex.org/W2755279082","https://openalex.org/W2884518415","https://openalex.org/W2899722123","https://openalex.org/W6676903177","https://openalex.org/W6753875772","https://openalex.org/W6756199758"],"related_works":["https://openalex.org/W3032457935","https://openalex.org/W2058585087","https://openalex.org/W2367598748","https://openalex.org/W2010013803","https://openalex.org/W3027690127","https://openalex.org/W4210962255","https://openalex.org/W3032647944","https://openalex.org/W2049694929","https://openalex.org/W3032189740","https://openalex.org/W2076551726"],"abstract_inverted_index":{"Stroke":[0],"is":[1,15,50,73],"the":[2,9,23,33,53,59,106,133,142],"fifth":[3],"leading":[4],"cause":[5],"of":[6,18,26,32,52,56,61,113,135,145],"death":[7],"in":[8,102,110],"United":[10],"States.":[11],"Subarachnoid":[12],"hemorrhage":[13],"(SAH)":[14],"a":[16,27,41,76,91,111,127],"type":[17],"stroke":[19],"often":[20],"caused":[21],"by":[22],"spontaneous":[24],"rupture":[25],"cerebral":[28,38,136],"aneurysm.":[29],"About":[30],"30%":[31],"SAH":[34],"patients":[35],"develop":[36],"delayed":[37],"ischemia":[39],"(DCI)":[40],"serious":[42],"secondary":[43],"complication":[44],"with":[45,138],"devastating":[46],"impact.":[47],"Cerebral":[48],"vasospasm":[49,62,137],"one":[51],"major":[54],"precursors":[55],"DCI.":[57],"Predicting":[58],"risk":[60],"would":[63],"enable":[64],"better":[65],"treatment":[66],"and":[67,99],"improved":[68],"outcomes.":[69],"Our":[70],"overarching":[71],"goal":[72],"to":[74,84,104,125,131],"find":[75,85],"brain":[77,118],"vasculature":[78,123],"representation":[79,124],"that":[80,94],"can":[81],"be":[82],"used":[83],"predictive":[86],"image-based":[87],"biomarkers.":[88],"We":[89],"propose":[90],"new":[92],"methodology":[93],"leverages":[95],"sparse":[96],"dictionary":[97],"learning":[98],"covariance-based":[100],"features":[101],"order":[103],"encode":[105],"whole":[107],"vessel":[108],"structure":[109],"vector":[112],"fixed":[114],"size.":[115],"Using":[116],"3D":[117],"angiograms,":[119],"we":[120],"use":[121],"this":[122],"train":[126],"logistic":[128],"regression":[129],"model":[130],"predict":[132],"occurrence":[134],"an":[139],"area":[140],"under":[141],"ROC":[143],"curve":[144],"0.93.":[146]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
