{"id":"https://openalex.org/W2979898440","doi":"https://doi.org/10.1109/embc.2019.8856681","title":"Continuous Prediction of Cognitive State Using A Marked-Point Process Modeling Framework","display_name":"Continuous Prediction of Cognitive State Using A Marked-Point Process Modeling Framework","publication_year":2019,"publication_date":"2019-07-01","ids":{"openalex":"https://openalex.org/W2979898440","doi":"https://doi.org/10.1109/embc.2019.8856681","mag":"2979898440","pmid":"https://pubmed.ncbi.nlm.nih.gov/31946505"},"language":"en","primary_location":{"id":"doi:10.1109/embc.2019.8856681","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc.2019.8856681","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006217709","display_name":"Yalda Amidi","orcid":"https://orcid.org/0000-0001-6842-0034"},"institutions":[{"id":"https://openalex.org/I170013655","display_name":"Isfahan University of Technology","ror":"https://ror.org/00af3sa43","country_code":"IR","type":"education","lineage":["https://openalex.org/I170013655"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Yalda Amidi","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan, Iran"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan, Iran","institution_ids":["https://openalex.org/I170013655"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087638591","display_name":"Angelique C. Paulk","orcid":"https://orcid.org/0000-0002-4413-3417"},"institutions":[{"id":"https://openalex.org/I4210087915","display_name":"Massachusetts General Hospital","ror":"https://ror.org/002pd6e78","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087915","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Angelique C. Paulk","raw_affiliation_strings":["Department of Neurology, Massachusetts General Hospital, Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Neurology, Massachusetts General Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I4210087915"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021515455","display_name":"Darin D. Dougherty","orcid":"https://orcid.org/0000-0003-4691-4353"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210087915","display_name":"Massachusetts General Hospital","ror":"https://ror.org/002pd6e78","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087915","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Darin D. Dougherty","raw_affiliation_strings":["Department of Psychiatry, Massachusetts General Hospital and Harvard Medical School, Charlestown, MA"],"affiliations":[{"raw_affiliation_string":"Department of Psychiatry, Massachusetts General Hospital and Harvard Medical School, Charlestown, MA","institution_ids":["https://openalex.org/I4210087915","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031778533","display_name":"Sydney S. Cash","orcid":"https://orcid.org/0000-0002-4557-6391"},"institutions":[{"id":"https://openalex.org/I4210087915","display_name":"Massachusetts General Hospital","ror":"https://ror.org/002pd6e78","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087915","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sydney S. Cash","raw_affiliation_strings":["Department of Neurology, Massachusetts General Hospital, Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Neurology, Massachusetts General Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I4210087915"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004461160","display_name":"Alik S. Widge","orcid":"https://orcid.org/0000-0001-8510-341X"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alik S. Widge","raw_affiliation_strings":["Department of Psychiatry, University Of Minnesota, Minneapolis, MN"],"affiliations":[{"raw_affiliation_string":"Department of Psychiatry, University Of Minnesota, Minneapolis, MN","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004106989","display_name":"Uri T. Eden","orcid":"https://orcid.org/0000-0002-2058-3691"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Uri T. Eden","raw_affiliation_strings":["Department of Mathematics and Statistics, Boston University, Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Statistics, Boston University, Boston, MA, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101909915","display_name":"Ali Yousefi","orcid":"https://orcid.org/0000-0002-2405-9934"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ali Yousefi","raw_affiliation_strings":["Department of Mathematics and Statistics, Boston University, Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Statistics, Boston University, Boston, MA, USA","institution_ids":["https://openalex.org/I111088046"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5006217709"],"corresponding_institution_ids":["https://openalex.org/I170013655"],"apc_list":null,"apc_paid":null,"fwci":0.3648,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.59608294,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"4","issue":null,"first_page":"2933","last_page":"2938"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11236","display_name":"Control Systems and Identification","score":0.9864000082015991,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12814","display_name":"Gaussian Processes and Bayesian Inference","score":0.9793000221252441,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6951891183853149},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5252066254615784},{"id":"https://openalex.org/keywords/cognitive-model","display_name":"Cognitive model","score":0.5247754454612732},{"id":"https://openalex.org/keywords/cognition","display_name":"Cognition","score":0.5100873112678528},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.49252399802207947},{"id":"https://openalex.org/keywords/state-space","display_name":"State space","score":0.48130905628204346},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4741372764110565},{"id":"https://openalex.org/keywords/encoder","display_name":"Encoder","score":0.4468221068382263},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14953866600990295},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.13558366894721985},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.09479612112045288}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6951891183853149},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5252066254615784},{"id":"https://openalex.org/C161407221","wikidata":"https://www.wikidata.org/wiki/Q4382939","display_name":"Cognitive model","level":3,"score":0.5247754454612732},{"id":"https://openalex.org/C169900460","wikidata":"https://www.wikidata.org/wiki/Q2200417","display_name":"Cognition","level":2,"score":0.5100873112678528},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.49252399802207947},{"id":"https://openalex.org/C72434380","wikidata":"https://www.wikidata.org/wiki/Q230930","display_name":"State space","level":2,"score":0.48130905628204346},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4741372764110565},{"id":"https://openalex.org/C118505674","wikidata":"https://www.wikidata.org/wiki/Q42586063","display_name":"Encoder","level":2,"score":0.4468221068382263},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14953866600990295},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.13558366894721985},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.09479612112045288},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D003071","descriptor_name":"Cognition","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003071","descriptor_name":"Cognition","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003071","descriptor_name":"Cognition","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003657","descriptor_name":"Decision Making","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003657","descriptor_name":"Decision Making","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003657","descriptor_name":"Decision Making","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008960","descriptor_name":"Models, Psychological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008960","descriptor_name":"Models, Psychological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008960","descriptor_name":"Models, Psychological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011930","descriptor_name":"Reaction Time","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011930","descriptor_name":"Reaction Time","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011930","descriptor_name":"Reaction Time","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/embc.2019.8856681","is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc.2019.8856681","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)","raw_type":"proceedings-article"},{"id":"pmid:31946505","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31946505","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.800000011920929}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1486632395","https://openalex.org/W1528905581","https://openalex.org/W1991852393","https://openalex.org/W2020934227","https://openalex.org/W2045968318","https://openalex.org/W2047984988","https://openalex.org/W2094227853","https://openalex.org/W2103575187","https://openalex.org/W2109843705","https://openalex.org/W2120182640","https://openalex.org/W2129983824","https://openalex.org/W2134892157","https://openalex.org/W2137345842","https://openalex.org/W2268007179","https://openalex.org/W2294761579","https://openalex.org/W2476003573","https://openalex.org/W2561424158","https://openalex.org/W2950731900","https://openalex.org/W4301861531","https://openalex.org/W6628849183"],"related_works":["https://openalex.org/W4390516098","https://openalex.org/W2181948922","https://openalex.org/W2384362569","https://openalex.org/W2142795561","https://openalex.org/W4205302943","https://openalex.org/W2561132942","https://openalex.org/W2351016899","https://openalex.org/W1595924246","https://openalex.org/W2365056927","https://openalex.org/W200146743"],"abstract_inverted_index":{"Behavioral":[0],"outcomes":[1,80],"in":[2,9,178],"many":[3],"cognitive":[4,85,92,117,199],"tasks":[5],"are":[6,58],"often":[7],"recorded":[8,81],"a":[10,72,83,95,101,124,130,134,179,202],"trial":[11,34,62,208,210],"structure":[12],"at":[13,94,201],"discrete":[14,61,135],"times.":[15],"To":[16],"adapt":[17],"to":[18,29,36,60,76,87,107,167],"this":[19,175],"structure,":[20],"neural":[21,65],"encoder":[22],"and":[23,43,114,133,142,147,155,162,192],"decoder":[24],"models":[25,54],"have":[26],"been":[27],"built":[28],"take":[30],"into":[31],"account":[32],"the":[33,38,109,121,144,153,158,169,207],"organization":[35],"characterize":[37,77,108],"connection":[39],"between":[40,111],"brain":[41],"dynamics":[42],"behavior,":[44],"e.g.":[45],"through":[46],"latent":[47],"dynamical":[48,116],"models.":[49],"The":[50],"challenge":[51],"of":[52,91,126],"these":[53],"is":[55,67],"that":[56,194],"they":[57],"limited":[59],"times":[63],"while":[64,183],"data":[66],"continuous.":[68],"Here,":[69],"we":[70,195],"propose":[71,100],"marked-point":[73,103,159],"process":[74,104,160],"framework":[75,106,122],"multivariate":[78],"behavioral":[79,127,180],"during":[82],"trial-structured":[84],"task,":[86],"build":[88],"an":[89,138,164,186],"estimation":[90,146],"state":[93,145],"fine":[96,203],"time":[97,132],"resolution.":[98],"We":[99,119,151,173],"state-space":[102],"modeling":[105,176],"relationship":[110],"observed":[112,139],"behavior":[113],"underlying":[115,198],"processes.":[118],"define":[120,152],"for":[123,157],"class":[125],"readouts":[128],"by":[129,209],"response":[131],"mark":[136],"signifying":[137],"binary":[140],"decision,":[141],"develop":[143,163],"system":[148],"identification":[149],"steps.":[150],"filter":[154],"smoother":[156],"observation":[161],"EM":[165],"algorithm":[166],"estimate":[168,197],"model's":[170],"free":[171],"parameters.":[172],"demonstrate":[174],"approach":[177],"readout":[181],"captured":[182],"participants":[184],"perform":[185],"emotional":[187],"conflict":[188],"resolution":[189,205],"task":[190],"(ECR)":[191],"show":[193],"can":[196],"processes":[200],"temporal":[204],"beyond":[206],"approach.":[211]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2019-10-18T00:00:00"}